RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 NRXN3Q9Y4C0 1643 aa23.08■■□□□ 1.28
SDHAF3-204ENST00000489852 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
SDHAF3-204ENST00000489852 KRT27Q7Z3Y8 459 aa23.06■■□□□ 1.28
SDHAF3-204ENST00000489852 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
SDHAF3-204ENST00000489852 SLIT2O94813 1529 aa23.03■■□□□ 1.28
SDHAF3-204ENST00000489852 EN1Q05925 392 aaPredicted RBP23.02■■□□□ 1.28
SDHAF3-204ENST00000489852 NPHP3Q7Z494 1330 aa23.01■■□□□ 1.27
SDHAF3-204ENST00000489852 ONECUT3O60422 494 aaPredicted RBP22.98■■□□□ 1.27
SDHAF3-204ENST00000489852 DCAF8L1A6NGE4 600 aa22.96■■□□□ 1.27
SDHAF3-204ENST00000489852 XPCQ01831 940 aaPredicted RBP22.96■■□□□ 1.27
SDHAF3-204ENST00000489852 VPS72Q15906 364 aa22.96■■□□□ 1.27
SDHAF3-204ENST00000489852 CCDC9Q9Y3X0 531 aaKnown RBP22.96■■□□□ 1.27
SDHAF3-204ENST00000489852 ANKRD50Q9ULJ7 1429 aa22.96■■□□□ 1.27
SDHAF3-204ENST00000489852 PXDNQ92626 1479 aa22.96■■□□□ 1.27
SDHAF3-204ENST00000489852 E9PCH4 1651 aa22.95■■□□□ 1.26
SDHAF3-204ENST00000489852 ESCO1Q5FWF5 840 aa22.95■■□□□ 1.26
SDHAF3-204ENST00000489852 SENP3-EIF4A1A0A087X0R7 540 aa22.94■■□□□ 1.26
SDHAF3-204ENST00000489852 A0A0G2JS52 829 aa22.93■■□□□ 1.26
SDHAF3-204ENST00000489852 FOXO3O43524 673 aa22.93■■□□□ 1.26
SDHAF3-204ENST00000489852 MYT1Q01538 1121 aa22.93■■□□□ 1.26
SDHAF3-204ENST00000489852 ZNF326Q5BKZ1 582 aaKnown RBP22.92■■□□□ 1.26
SDHAF3-204ENST00000489852 IQGAP3Q86VI3 1631 aa22.92■■□□□ 1.26
SDHAF3-204ENST00000489852 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
SDHAF3-204ENST00000489852 RGPD1P0DJD0 1748 aa22.89■■□□□ 1.26
SDHAF3-204ENST00000489852 ROBO2Q9HCK4 1378 aa22.89■■□□□ 1.25
SDHAF3-204ENST00000489852 VPS8Q8N3P4 1428 aa22.88■■□□□ 1.25
SDHAF3-204ENST00000489852 LRPPRCP42704 1394 aaKnown RBP22.88■■□□□ 1.25
SDHAF3-204ENST00000489852 EZH2Q15910 746 aaKnown RBP22.87■■□□□ 1.25
SDHAF3-204ENST00000489852 USP32Q8NFA0 1604 aa22.86■■□□□ 1.25
SDHAF3-204ENST00000489852 DISP2A7MBM2 1401 aa22.85■■□□□ 1.25
SDHAF3-204ENST00000489852 HAP1P54257 671 aaPredicted RBP22.85■■□□□ 1.25
SDHAF3-204ENST00000489852 PPP1R1BQ9UD71 204 aaPredicted RBP22.84■■□□□ 1.25
SDHAF3-204ENST00000489852 ZNF784Q8NCA9 323 aaPredicted RBP22.83■■□□□ 1.25
SDHAF3-204ENST00000489852 SPATA31A3Q5VYP0 1347 aa22.82■■□□□ 1.24
SDHAF3-204ENST00000489852 FAM98CQ17RN3 349 aaKnown RBP22.82■■□□□ 1.24
SDHAF3-204ENST00000489852 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
SDHAF3-204ENST00000489852 NWD2Q9ULI1 1742 aa22.82■■□□□ 1.24
SDHAF3-204ENST00000489852 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
SDHAF3-204ENST00000489852 HFM1A2PYH4 1435 aa22.8■■□□□ 1.24
SDHAF3-204ENST00000489852 CAMKK2Q96RR4 588 aa22.79■■□□□ 1.24
SDHAF3-204ENST00000489852 NINLQ9Y2I6 1382 aa22.78■■□□□ 1.24
SDHAF3-204ENST00000489852 TNS1Q9HBL0 1735 aaKnown RBP22.78■■□□□ 1.24
SDHAF3-204ENST00000489852 C1QTNF8P60827 252 aa22.77■■□□□ 1.24
SDHAF3-204ENST00000489852 SPON1Q9HCB6 807 aa22.76■■□□□ 1.23
SDHAF3-204ENST00000489852 CDC42BPGQ6DT37 1551 aa22.76■■□□□ 1.23
SDHAF3-204ENST00000489852 NUTM2FA1L443 756 aa22.75■■□□□ 1.23
SDHAF3-204ENST00000489852 PLEKHG5O94827 1062 aa22.75■■□□□ 1.23
SDHAF3-204ENST00000489852 CABLES1Q8TDN4 633 aa22.75■■□□□ 1.23
SDHAF3-204ENST00000489852 NEXMIFQ5QGS0 1516 aa22.75■■□□□ 1.23
SDHAF3-204ENST00000489852 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
SDHAF3-204ENST00000489852 ADGRB2O60241 1585 aa22.72■■□□□ 1.23
SDHAF3-204ENST00000489852 CAMTA1Q9Y6Y1 1673 aa22.72■■□□□ 1.23
SDHAF3-204ENST00000489852 KRT28Q7Z3Y7 464 aa22.72■■□□□ 1.23
SDHAF3-204ENST00000489852 PARD3Q8TEW0 1356 aa22.72■■□□□ 1.23
SDHAF3-204ENST00000489852 KCNQ2O43526 872 aa22.71■■□□□ 1.23
SDHAF3-204ENST00000489852 NBPF8Q3BBV2 869 aa22.71■■□□□ 1.23
SDHAF3-204ENST00000489852 NBPF14Q5TI25 921 aa22.71■■□□□ 1.23
SDHAF3-204ENST00000489852 NUP155O75694 1391 aa22.71■■□□□ 1.23
SDHAF3-204ENST00000489852 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
SDHAF3-204ENST00000489852 FAM83GA6ND36 823 aa22.7■■□□□ 1.22
SDHAF3-204ENST00000489852 TRIM37O94972 964 aa22.7■■□□□ 1.22
SDHAF3-204ENST00000489852 APBA3O96018 575 aa22.69■■□□□ 1.22
SDHAF3-204ENST00000489852 FAM50AQ14320 339 aaKnown RBP22.69■■□□□ 1.22
SDHAF3-204ENST00000489852 NAIPQ13075 1403 aa22.66■■□□□ 1.22
SDHAF3-204ENST00000489852 TNS3Q68CZ2 1445 aa22.66■■□□□ 1.22
SDHAF3-204ENST00000489852 BTG4Q9NY30 223 aa22.66■■□□□ 1.22
SDHAF3-204ENST00000489852 VGFO15240 615 aaPredicted RBP22.65■■□□□ 1.22
SDHAF3-204ENST00000489852 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
SDHAF3-204ENST00000489852 UTRNP46939 3433 aa22.64■■□□□ 1.22
SDHAF3-204ENST00000489852 PSME1Q06323 249 aa22.64■■□□□ 1.21
SDHAF3-204ENST00000489852 APLP2Q06481 763 aa22.64■■□□□ 1.21
SDHAF3-204ENST00000489852 LMOD2Q6P5Q4 547 aa22.64■■□□□ 1.21
SDHAF3-204ENST00000489852 FAM196AQ6ZSG2 479 aa22.64■■□□□ 1.21
SDHAF3-204ENST00000489852 KIF1AQ12756 1690 aa22.63■■□□□ 1.21
SDHAF3-204ENST00000489852 RREB1Q92766 1687 aa22.62■■□□□ 1.21
SDHAF3-204ENST00000489852 NUP188Q5SRE5 1749 aa22.62■■□□□ 1.21
SDHAF3-204ENST00000489852 ABCA3Q99758 1704 aa22.62■■□□□ 1.21
SDHAF3-204ENST00000489852 SPATA31A5Q5VU36 1347 aa22.6■■□□□ 1.21
SDHAF3-204ENST00000489852 SPATA31A7Q8IWB4 1347 aa22.6■■□□□ 1.21
SDHAF3-204ENST00000489852 THSD7AQ9UPZ6 1657 aa22.59■■□□□ 1.21
SDHAF3-204ENST00000489852 CLTCL1P53675 1640 aa22.58■■□□□ 1.21
SDHAF3-204ENST00000489852 ARHGEF10O15013 1369 aa22.58■■□□□ 1.21
SDHAF3-204ENST00000489852 WAPLQ7Z5K2 1190 aa22.57■■□□□ 1.2
SDHAF3-204ENST00000489852 SBNO1A3KN83 1393 aa22.56■■□□□ 1.2
SDHAF3-204ENST00000489852 KIF1BO60333 1816 aa22.55■■□□□ 1.2
SDHAF3-204ENST00000489852 FMN2Q9NZ56 1722 aa22.54■■□□□ 1.2
SDHAF3-204ENST00000489852 PHF8Q9UPP1 1060 aa22.54■■□□□ 1.2
SDHAF3-204ENST00000489852 COL14A1Q05707 1796 aaKnown RBP22.53■■□□□ 1.2
SDHAF3-204ENST00000489852 CEP350Q5VT06 3117 aa22.53■■□□□ 1.2
SDHAF3-204ENST00000489852 STK26Q9P289 416 aa22.52■■□□□ 1.2
SDHAF3-204ENST00000489852 CHD4Q14839 1912 aa22.52■■□□□ 1.2
SDHAF3-204ENST00000489852 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
SDHAF3-204ENST00000489852 GIGYF1O75420 1035 aaPredicted RBP22.49■■□□□ 1.19
SDHAF3-204ENST00000489852 NRKQ7Z2Y5 1582 aa22.49■■□□□ 1.19
SDHAF3-204ENST00000489852 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
SDHAF3-204ENST00000489852 RPGRIP1LQ68CZ1 1315 aa22.48■■□□□ 1.19
SDHAF3-204ENST00000489852 SPATA31A1Q5TZJ5 1347 aa22.47■■□□□ 1.19
SDHAF3-204ENST00000489852 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
SDHAF3-204ENST00000489852 RGPD8O14715 1765 aaPredicted RBP22.46■■□□□ 1.19
SDHAF3-204ENST00000489852 PDE3BQ13370 1112 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms