RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 NINLQ9Y2I6 1382 aa19.77■□□□□ 0.76
COL9A1-208ENST00000489611 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
COL9A1-208ENST00000489611 POLR3AO14802 1390 aaPredicted RBP19.76■□□□□ 0.75
COL9A1-208ENST00000489611 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
COL9A1-208ENST00000489611 TMEM132EQ6IEE7 984 aa19.76■□□□□ 0.75
COL9A1-208ENST00000489611 CARD14Q9BXL6 1004 aa19.75■□□□□ 0.75
COL9A1-208ENST00000489611 NSD2O96028 1365 aa19.75■□□□□ 0.75
COL9A1-208ENST00000489611 RIMS2Q9UQ26 1411 aa19.74■□□□□ 0.75
COL9A1-208ENST00000489611 ZNF521Q96K83 1311 aa19.73■□□□□ 0.75
COL9A1-208ENST00000489611 SALL2Q9Y467 1007 aaPredicted RBP19.72■□□□□ 0.75
COL9A1-208ENST00000489611 RIMS1Q86UR5 1692 aaKnown RBP19.72■□□□□ 0.75
COL9A1-208ENST00000489611 NLRP1Q9C000 1473 aa19.71■□□□□ 0.75
COL9A1-208ENST00000489611 NSD3Q9BZ95 1437 aa19.71■□□□□ 0.75
COL9A1-208ENST00000489611 ADAMTSL3P82987 1691 aa19.71■□□□□ 0.75
COL9A1-208ENST00000489611 GOLGA2Q08379 1002 aa19.7■□□□□ 0.74
COL9A1-208ENST00000489611 CDCA7LQ96GN5 454 aa19.7■□□□□ 0.74
COL9A1-208ENST00000489611 ANKRD36BQ8N2N9 1353 aa19.7■□□□□ 0.74
COL9A1-208ENST00000489611 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
COL9A1-208ENST00000489611 TULP4Q9NRJ4 1543 aa19.69■□□□□ 0.74
COL9A1-208ENST00000489611 SENP3-EIF4A1A0A087X0R7 540 aa19.68■□□□□ 0.74
COL9A1-208ENST00000489611 UBR1Q8IWV7 1749 aa19.68■□□□□ 0.74
COL9A1-208ENST00000489611 TMEM2Q9UHN6 1383 aa19.67■□□□□ 0.74
COL9A1-208ENST00000489611 PLEKHH1Q9ULM0 1364 aa19.67■□□□□ 0.74
COL9A1-208ENST00000489611 MORC1Q86VD1 984 aa19.66■□□□□ 0.74
COL9A1-208ENST00000489611 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
COL9A1-208ENST00000489611 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.66■□□□□ 0.74
COL9A1-208ENST00000489611 DUSP27Q5VZP5 1158 aa19.65■□□□□ 0.74
COL9A1-208ENST00000489611 ATAD2Q6PL18 1390 aa19.65■□□□□ 0.74
COL9A1-208ENST00000489611 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.74
COL9A1-208ENST00000489611 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
COL9A1-208ENST00000489611 SLC12A5Q9H2X9 1139 aa19.64■□□□□ 0.73
COL9A1-208ENST00000489611 PTPRMP28827 1452 aa19.63■□□□□ 0.73
COL9A1-208ENST00000489611 TRMT2AQ8IZ69 625 aaKnown RBP19.63■□□□□ 0.73
COL9A1-208ENST00000489611 STK26Q9P289 416 aa19.63■□□□□ 0.73
COL9A1-208ENST00000489611 ALKQ9UM73 1620 aa19.63■□□□□ 0.73
COL9A1-208ENST00000489611 LTKP29376 864 aa19.63■□□□□ 0.73
COL9A1-208ENST00000489611 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
COL9A1-208ENST00000489611 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
COL9A1-208ENST00000489611 YTHDC2Q9H6S0 1430 aaKnown RBP19.62■□□□□ 0.73
COL9A1-208ENST00000489611 SHPRHQ149N8 1683 aa19.62■□□□□ 0.73
COL9A1-208ENST00000489611 E9PSI1 815 aa19.61■□□□□ 0.73
COL9A1-208ENST00000489611 EXOC6Q8TAG9 804 aa19.61■□□□□ 0.73
COL9A1-208ENST00000489611 TXNDC2Q86VQ3 553 aa19.61■□□□□ 0.73
COL9A1-208ENST00000489611 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
COL9A1-208ENST00000489611 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
COL9A1-208ENST00000489611 MED14O60244 1454 aa19.59■□□□□ 0.73
COL9A1-208ENST00000489611 THEMISQ8N1K5 641 aaPredicted RBP19.59■□□□□ 0.73
COL9A1-208ENST00000489611 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
COL9A1-208ENST00000489611 ABCC11Q96J66 1382 aa19.58■□□□□ 0.72
COL9A1-208ENST00000489611 APAF1O14727 1248 aa19.58■□□□□ 0.72
COL9A1-208ENST00000489611 ANKRD26Q9UPS8 1709 aa19.57■□□□□ 0.72
COL9A1-208ENST00000489611 TERF2IPQ9NYB0 399 aa19.57■□□□□ 0.72
COL9A1-208ENST00000489611 NRXN3Q9Y4C0 1643 aa19.57■□□□□ 0.72
COL9A1-208ENST00000489611 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
COL9A1-208ENST00000489611 CEP170BQ9Y4F5 1589 aaPredicted RBP19.56■□□□□ 0.72
COL9A1-208ENST00000489611 TCERG1O14776 1098 aaKnown RBP19.56■□□□□ 0.72
COL9A1-208ENST00000489611 SAFB2Q14151 953 aaKnown RBP eCLIP19.56■□□□□ 0.72
COL9A1-208ENST00000489611 ARHGAP23Q9P227 1491 aa19.56■□□□□ 0.72
COL9A1-208ENST00000489611 SLIT1O75093 1534 aa19.55■□□□□ 0.72
COL9A1-208ENST00000489611 RUNDC1Q96C34 613 aa19.55■□□□□ 0.72
COL9A1-208ENST00000489611 METP08581 1390 aa19.55■□□□□ 0.72
COL9A1-208ENST00000489611 POGKQ9P215 609 aa19.55■□□□□ 0.72
COL9A1-208ENST00000489611 MS4A1P11836 297 aa19.54■□□□□ 0.72
COL9A1-208ENST00000489611 CCDC146Q8IYE0 955 aa19.54■□□□□ 0.72
COL9A1-208ENST00000489611 PLEKHG1Q9ULL1 1385 aa19.54■□□□□ 0.72
COL9A1-208ENST00000489611 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
COL9A1-208ENST00000489611 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
COL9A1-208ENST00000489611 PRAM1Q96QH2 718 aa19.53■□□□□ 0.72
COL9A1-208ENST00000489611 SETD1AO15047 1707 aaKnown RBP19.52■□□□□ 0.72
COL9A1-208ENST00000489611 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
COL9A1-208ENST00000489611 CABP2Q9NPB3 220 aa19.52■□□□□ 0.72
COL9A1-208ENST00000489611 A0A1W2PP64 1363 aa19.52■□□□□ 0.72
COL9A1-208ENST00000489611 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.71
COL9A1-208ENST00000489611 MTHFSP49914 203 aa19.51■□□□□ 0.71
COL9A1-208ENST00000489611 SLC26A8Q96RN1 970 aa19.51■□□□□ 0.71
COL9A1-208ENST00000489611 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
COL9A1-208ENST00000489611 WWC1Q8IX03 1113 aa19.5■□□□□ 0.71
COL9A1-208ENST00000489611 HDGFL2Q7Z4V5 671 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-208ENST00000489611 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
COL9A1-208ENST00000489611 PLIN1O60240 522 aa19.49■□□□□ 0.71
COL9A1-208ENST00000489611 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-208ENST00000489611 WAPLQ7Z5K2 1190 aa19.48■□□□□ 0.71
COL9A1-208ENST00000489611 ATP7BP35670 1465 aa19.47■□□□□ 0.71
COL9A1-208ENST00000489611 MINK1Q8N4C8 1332 aaPredicted RBP19.46■□□□□ 0.71
COL9A1-208ENST00000489611 KIF20BQ96Q89 1820 aa19.46■□□□□ 0.71
COL9A1-208ENST00000489611 ZNF142P52746 1687 aaPredicted RBP19.46■□□□□ 0.71
COL9A1-208ENST00000489611 KNDC1Q76NI1 1749 aa19.45■□□□□ 0.7
COL9A1-208ENST00000489611 CD163L1Q9NR16 1453 aa19.45■□□□□ 0.7
COL9A1-208ENST00000489611 SIRT1Q96EB6 747 aa19.45■□□□□ 0.7
COL9A1-208ENST00000489611 ADGRB2O60241 1585 aa19.45■□□□□ 0.7
COL9A1-208ENST00000489611 SETD1BQ9UPS6 1966 aaKnown RBP19.45■□□□□ 0.7
COL9A1-208ENST00000489611 KDM4FA0A1W2PPD8 638 aa19.45■□□□□ 0.7
COL9A1-208ENST00000489611 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
COL9A1-208ENST00000489611 CENPQQ7L2Z9 268 aaPredicted RBP19.45■□□□□ 0.7
COL9A1-208ENST00000489611 AAMPQ13685 434 aa19.44■□□□□ 0.7
COL9A1-208ENST00000489611 PDE3AQ14432 1141 aa19.44■□□□□ 0.7
COL9A1-208ENST00000489611 ANKLE2Q86XL3 938 aa19.44■□□□□ 0.7
COL9A1-208ENST00000489611 TCP11L2Q8N4U5 519 aa19.44■□□□□ 0.7
COL9A1-208ENST00000489611 PNNQ9H307 717 aaKnown RBP19.44■□□□□ 0.7
COL9A1-208ENST00000489611 CDK19Q9BWU1 502 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms