RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 RRP1P56182 461 aaKnown RBP11.7□□□□□ -0.54
CSMD2-209ENST00000489419 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
CSMD2-209ENST00000489419 TMEM132EQ6IEE7 984 aa11.69□□□□□ -0.54
CSMD2-209ENST00000489419 B4GALNT3Q6L9W6 998 aa11.69□□□□□ -0.54
CSMD2-209ENST00000489419 USP32Q8NFA0 1604 aa11.68□□□□□ -0.54
CSMD2-209ENST00000489419 PDE4CQ08493 712 aa11.68□□□□□ -0.54
CSMD2-209ENST00000489419 POLR3AO14802 1390 aaPredicted RBP11.68□□□□□ -0.54
CSMD2-209ENST00000489419 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
CSMD2-209ENST00000489419 NINLQ9Y2I6 1382 aa11.68□□□□□ -0.54
CSMD2-209ENST00000489419 ARHGEF28Q8N1W1 1705 aaKnown RBP11.67□□□□□ -0.54
CSMD2-209ENST00000489419 ZNF521Q96K83 1311 aa11.67□□□□□ -0.54
CSMD2-209ENST00000489419 NSD2O96028 1365 aa11.66□□□□□ -0.54
CSMD2-209ENST00000489419 CDCA7LQ96GN5 454 aa11.66□□□□□ -0.54
CSMD2-209ENST00000489419 NSD3Q9BZ95 1437 aa11.65□□□□□ -0.54
CSMD2-209ENST00000489419 SLC12A5Q9H2X9 1139 aa11.65□□□□□ -0.54
CSMD2-209ENST00000489419 ANKRD36BQ8N2N9 1353 aa11.65□□□□□ -0.54
CSMD2-209ENST00000489419 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.55
CSMD2-209ENST00000489419 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.55
CSMD2-209ENST00000489419 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
CSMD2-209ENST00000489419 TULP4Q9NRJ4 1543 aa11.64□□□□□ -0.55
CSMD2-209ENST00000489419 MORC1Q86VD1 984 aa11.64□□□□□ -0.55
CSMD2-209ENST00000489419 SPATA31D1Q6ZQQ2 1576 aa11.63□□□□□ -0.55
CSMD2-209ENST00000489419 PLEKHH1Q9ULM0 1364 aa11.63□□□□□ -0.55
CSMD2-209ENST00000489419 FBXO31Q5XUX0 539 aaPredicted RBP11.62□□□□□ -0.55
CSMD2-209ENST00000489419 TRMT2AQ8IZ69 625 aaKnown RBP11.62□□□□□ -0.55
CSMD2-209ENST00000489419 TSPOAP1O95153 1857 aa11.62□□□□□ -0.55
CSMD2-209ENST00000489419 MYO5BQ9ULV0 1848 aa11.62□□□□□ -0.55
CSMD2-209ENST00000489419 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
CSMD2-209ENST00000489419 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
CSMD2-209ENST00000489419 YTHDC2Q9H6S0 1430 aaKnown RBP11.61□□□□□ -0.55
CSMD2-209ENST00000489419 NUTM2DQ5VT03 806 aaPredicted RBP11.61□□□□□ -0.55
CSMD2-209ENST00000489419 ATAD2Q6PL18 1390 aa11.61□□□□□ -0.55
CSMD2-209ENST00000489419 PTPRMP28827 1452 aa11.61□□□□□ -0.55
CSMD2-209ENST00000489419 ARHGEF40Q8TER5 1519 aa11.61□□□□□ -0.55
CSMD2-209ENST00000489419 SLFN5Q08AF3 891 aa11.61□□□□□ -0.55
CSMD2-209ENST00000489419 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
CSMD2-209ENST00000489419 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
CSMD2-209ENST00000489419 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
CSMD2-209ENST00000489419 A2ML1A8K2U0 1454 aa11.6□□□□□ -0.55
CSMD2-209ENST00000489419 CLTCQ00610 1675 aaKnown RBP11.59□□□□□ -0.55
CSMD2-209ENST00000489419 CFAP53Q96M91 514 aa11.59□□□□□ -0.55
CSMD2-209ENST00000489419 DLC1Q96QB1 1528 aa11.59□□□□□ -0.55
CSMD2-209ENST00000489419 EXOC6Q8TAG9 804 aa11.59□□□□□ -0.55
CSMD2-209ENST00000489419 E9PSI1 815 aa11.58□□□□□ -0.56
CSMD2-209ENST00000489419 APAF1O14727 1248 aa11.58□□□□□ -0.56
CSMD2-209ENST00000489419 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.58□□□□□ -0.56
CSMD2-209ENST00000489419 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.58□□□□□ -0.56
CSMD2-209ENST00000489419 ABCC11Q96J66 1382 aa11.58□□□□□ -0.56
CSMD2-209ENST00000489419 DEKP35659 375 aaKnown RBP11.58□□□□□ -0.56
CSMD2-209ENST00000489419 TERF2IPQ9NYB0 399 aa11.58□□□□□ -0.56
CSMD2-209ENST00000489419 POGKQ9P215 609 aa11.58□□□□□ -0.56
CSMD2-209ENST00000489419 MED14O60244 1454 aa11.58□□□□□ -0.56
CSMD2-209ENST00000489419 KIF13AQ9H1H9 1805 aa11.57□□□□□ -0.56
CSMD2-209ENST00000489419 FGD1P98174 961 aa11.57□□□□□ -0.56
CSMD2-209ENST00000489419 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
CSMD2-209ENST00000489419 STK26Q9P289 416 aa11.57□□□□□ -0.56
CSMD2-209ENST00000489419 RIMS2Q9UQ26 1411 aa11.57□□□□□ -0.56
CSMD2-209ENST00000489419 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
CSMD2-209ENST00000489419 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
CSMD2-209ENST00000489419 PRAM1Q96QH2 718 aa11.57□□□□□ -0.56
CSMD2-209ENST00000489419 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
CSMD2-209ENST00000489419 CCDC146Q8IYE0 955 aa11.56□□□□□ -0.56
CSMD2-209ENST00000489419 SHPRHQ149N8 1683 aa11.55□□□□□ -0.56
CSMD2-209ENST00000489419 NKTRP30414 1462 aaKnown RBP11.55□□□□□ -0.56
CSMD2-209ENST00000489419 MTHFSP49914 203 aa11.55□□□□□ -0.56
CSMD2-209ENST00000489419 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
CSMD2-209ENST00000489419 ESF1Q9H501 851 aaKnown RBP11.55□□□□□ -0.56
CSMD2-209ENST00000489419 ZMYM3Q14202 1370 aa11.55□□□□□ -0.56
CSMD2-209ENST00000489419 CCDC27Q2M243 656 aa11.55□□□□□ -0.56
CSMD2-209ENST00000489419 A0A1W2PP64 1363 aa11.54□□□□□ -0.56
CSMD2-209ENST00000489419 HDGFL2Q7Z4V5 671 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-209ENST00000489419 TCERG1O14776 1098 aaKnown RBP11.53□□□□□ -0.56
CSMD2-209ENST00000489419 SAFB2Q14151 953 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSMD2-209ENST00000489419 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
CSMD2-209ENST00000489419 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
CSMD2-209ENST00000489419 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-209ENST00000489419 CDK19Q9BWU1 502 aa11.52□□□□□ -0.56
CSMD2-209ENST00000489419 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.56
CSMD2-209ENST00000489419 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
CSMD2-209ENST00000489419 CD163L1Q9NR16 1453 aa11.52□□□□□ -0.57
CSMD2-209ENST00000489419 PLIN1O60240 522 aa11.51□□□□□ -0.57
CSMD2-209ENST00000489419 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
CSMD2-209ENST00000489419 MS4A1P11836 297 aa11.51□□□□□ -0.57
CSMD2-209ENST00000489419 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
CSMD2-209ENST00000489419 MLECQ14165 292 aa11.51□□□□□ -0.57
CSMD2-209ENST00000489419 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
CSMD2-209ENST00000489419 ANKRD26Q9UPS8 1709 aa11.51□□□□□ -0.57
CSMD2-209ENST00000489419 FYB1O15117 783 aa11.5□□□□□ -0.57
CSMD2-209ENST00000489419 TCP11L2Q8N4U5 519 aa11.5□□□□□ -0.57
CSMD2-209ENST00000489419 ATP7BP35670 1465 aa11.5□□□□□ -0.57
CSMD2-209ENST00000489419 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-209ENST00000489419 FAM135BQ49AJ0 1406 aa11.5□□□□□ -0.57
CSMD2-209ENST00000489419 TNRQ92752 1358 aa11.5□□□□□ -0.57
CSMD2-209ENST00000489419 NLRP1Q9C000 1473 aa11.49□□□□□ -0.57
CSMD2-209ENST00000489419 TECPR2O15040 1411 aa11.49□□□□□ -0.57
CSMD2-209ENST00000489419 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
CSMD2-209ENST00000489419 NRXN3Q9Y4C0 1643 aa11.48□□□□□ -0.57
CSMD2-209ENST00000489419 PDE3AQ14432 1141 aa11.48□□□□□ -0.57
CSMD2-209ENST00000489419 CABP1Q9NZU7 370 aa11.48□□□□□ -0.57
CSMD2-209ENST00000489419 PNPLA6Q8IY17 1366 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms