RNA–Protein interactions for RNA: ENST00000489224.5

CHL1-215, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 2,564 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-215ENST00000489224 METP08581 1390 aa25.7■■□□□ 1.71
CHL1-215ENST00000489224 PLEKHH1Q9ULM0 1364 aa25.69■■□□□ 1.7
CHL1-215ENST00000489224 SRPK2P78362 688 aaKnown RBP25.69■■□□□ 1.7
CHL1-215ENST00000489224 NRXN3Q9Y4C0 1643 aa25.69■■□□□ 1.7
CHL1-215ENST00000489224 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
CHL1-215ENST00000489224 TMEM2Q9UHN6 1383 aa25.67■■□□□ 1.7
CHL1-215ENST00000489224 IRX6P78412 446 aaPredicted RBP25.67■■□□□ 1.7
CHL1-215ENST00000489224 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.67■■□□□ 1.7
CHL1-215ENST00000489224 UBR1Q8IWV7 1749 aa25.66■■□□□ 1.7
CHL1-215ENST00000489224 LTKP29376 864 aa25.66■■□□□ 1.7
CHL1-215ENST00000489224 ADAMTS8Q9UP79 889 aa25.66■■□□□ 1.7
CHL1-215ENST00000489224 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
CHL1-215ENST00000489224 PUS7Q96PZ0 661 aaKnown RBP25.64■■□□□ 1.69
CHL1-215ENST00000489224 NEFLP07196 543 aa25.63■■□□□ 1.69
CHL1-215ENST00000489224 TNNT2P45379 298 aaPredicted RBP25.63■■□□□ 1.69
CHL1-215ENST00000489224 C3P01024 1663 aa25.63■■□□□ 1.69
CHL1-215ENST00000489224 TXNDC2Q86VQ3 553 aa25.62■■□□□ 1.69
CHL1-215ENST00000489224 CDK19Q9BWU1 502 aa25.62■■□□□ 1.69
CHL1-215ENST00000489224 FER1L4A9Z1Z3 1794 aa25.6■■□□□ 1.69
CHL1-215ENST00000489224 ANKRD36BQ8N2N9 1353 aa25.6■■□□□ 1.69
CHL1-215ENST00000489224 ABCC11Q96J66 1382 aa25.6■■□□□ 1.69
CHL1-215ENST00000489224 HDGFP51858 240 aaKnown RBP25.58■■□□□ 1.69
CHL1-215ENST00000489224 A0A1W2PP64 1363 aa25.58■■□□□ 1.69
CHL1-215ENST00000489224 SMG6Q86US8 1419 aaKnown RBP25.58■■□□□ 1.68
CHL1-215ENST00000489224 MORC1Q86VD1 984 aa25.57■■□□□ 1.68
CHL1-215ENST00000489224 BLMP54132 1417 aaPredicted RBP25.57■■□□□ 1.68
CHL1-215ENST00000489224 NUDCQ9Y266 331 aa25.57■■□□□ 1.68
CHL1-215ENST00000489224 NLRP1Q9C000 1473 aa25.57■■□□□ 1.68
CHL1-215ENST00000489224 DLC1Q96QB1 1528 aa25.55■■□□□ 1.68
CHL1-215ENST00000489224 ADAMTS13Q76LX8 1427 aa25.55■■□□□ 1.68
CHL1-215ENST00000489224 CABP1Q9NZU7 370 aa25.54■■□□□ 1.68
CHL1-215ENST00000489224 CGNL1Q0VF96 1302 aa25.54■■□□□ 1.68
CHL1-215ENST00000489224 WDR43Q15061 677 aaKnown RBP eCLIP25.54■■□□□ 1.68
CHL1-215ENST00000489224 SLC26A8Q96RN1 970 aa25.53■■□□□ 1.68
CHL1-215ENST00000489224 CD163L1Q9NR16 1453 aa25.53■■□□□ 1.68
CHL1-215ENST00000489224 ATAD2Q6PL18 1390 aa25.53■■□□□ 1.68
CHL1-215ENST00000489224 CDCA7LQ96GN5 454 aa25.52■■□□□ 1.68
CHL1-215ENST00000489224 CCDC146Q8IYE0 955 aa25.5■■□□□ 1.67
CHL1-215ENST00000489224 PLEKHG1Q9ULL1 1385 aa25.49■■□□□ 1.67
CHL1-215ENST00000489224 ROBO2Q9HCK4 1378 aa25.48■■□□□ 1.67
CHL1-215ENST00000489224 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
CHL1-215ENST00000489224 GGNBP2Q9H3C7 697 aa25.48■■□□□ 1.67
CHL1-215ENST00000489224 INSRP06213 1382 aa25.48■■□□□ 1.67
CHL1-215ENST00000489224 NINLQ9Y2I6 1382 aa25.47■■□□□ 1.67
CHL1-215ENST00000489224 USP32Q8NFA0 1604 aa25.47■■□□□ 1.67
CHL1-215ENST00000489224 EID1Q9Y6B2 187 aa25.46■■□□□ 1.67
CHL1-215ENST00000489224 WASLO00401 505 aaPredicted RBP25.46■■□□□ 1.67
CHL1-215ENST00000489224 MTHFSP49914 203 aa25.46■■□□□ 1.67
CHL1-215ENST00000489224 TERF2IPQ9NYB0 399 aa25.45■■□□□ 1.66
CHL1-215ENST00000489224 TECPR2O15040 1411 aa25.44■■□□□ 1.66
CHL1-215ENST00000489224 FYB1O15117 783 aa25.44■■□□□ 1.66
CHL1-215ENST00000489224 ARHGAP23Q9P227 1491 aa25.43■■□□□ 1.66
CHL1-215ENST00000489224 PTPRUQ92729 1446 aa25.43■■□□□ 1.66
CHL1-215ENST00000489224 THEMISQ8N1K5 641 aaPredicted RBP25.43■■□□□ 1.66
CHL1-215ENST00000489224 POLR3AO14802 1390 aaPredicted RBP25.42■■□□□ 1.66
CHL1-215ENST00000489224 SLIT1O75093 1534 aa25.42■■□□□ 1.66
CHL1-215ENST00000489224 MED14O60244 1454 aa25.42■■□□□ 1.66
CHL1-215ENST00000489224 FAM135BQ49AJ0 1406 aa25.41■■□□□ 1.66
CHL1-215ENST00000489224 RIMS1Q86UR5 1692 aaKnown RBP25.41■■□□□ 1.66
CHL1-215ENST00000489224 HDGFL2Q7Z4V5 671 aaPredicted RBP25.4■■□□□ 1.66
CHL1-215ENST00000489224 SIRT1Q96EB6 747 aa25.4■■□□□ 1.66
CHL1-215ENST00000489224 CPS1P31327 1500 aa25.39■■□□□ 1.66
CHL1-215ENST00000489224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.39■■□□□ 1.66
CHL1-215ENST00000489224 KNDC1Q76NI1 1749 aa25.39■■□□□ 1.65
CHL1-215ENST00000489224 NSD2O96028 1365 aa25.39■■□□□ 1.65
CHL1-215ENST00000489224 NUDT16Q96DE0 195 aaKnown RBP25.38■■□□□ 1.65
CHL1-215ENST00000489224 APAF1O14727 1248 aa25.38■■□□□ 1.65
CHL1-215ENST00000489224 PRR36Q9H6K5 1346 aa25.36■■□□□ 1.65
CHL1-215ENST00000489224 NUTM2FA1L443 756 aa25.36■■□□□ 1.65
CHL1-215ENST00000489224 FBLN1P23142 703 aa25.36■■□□□ 1.65
CHL1-215ENST00000489224 PDE3BQ13370 1112 aa25.36■■□□□ 1.65
CHL1-215ENST00000489224 AMOTL2Q9Y2J4 779 aa25.36■■□□□ 1.65
CHL1-215ENST00000489224 PPIP5K1Q6PFW1 1433 aa25.35■■□□□ 1.65
CHL1-215ENST00000489224 RNF123Q5XPI4 1314 aa25.35■■□□□ 1.65
CHL1-215ENST00000489224 SHPRHQ149N8 1683 aa25.34■■□□□ 1.65
CHL1-215ENST00000489224 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.33■■□□□ 1.65
CHL1-215ENST00000489224 TBX22Q9Y458 520 aa25.33■■□□□ 1.65
CHL1-215ENST00000489224 ZNF521Q96K83 1311 aa25.33■■□□□ 1.65
CHL1-215ENST00000489224 CEP170BQ9Y4F5 1589 aaPredicted RBP25.32■■□□□ 1.64
CHL1-215ENST00000489224 CCDC61Q9Y6R9 512 aa25.31■■□□□ 1.64
CHL1-215ENST00000489224 ZRANB1Q9UGI0 708 aa25.3■■□□□ 1.64
CHL1-215ENST00000489224 ATP7BP35670 1465 aa25.3■■□□□ 1.64
CHL1-215ENST00000489224 CPSF1Q10570 1443 aaKnown RBP25.3■■□□□ 1.64
CHL1-215ENST00000489224 RCAN3Q9UKA8 241 aa25.29■■□□□ 1.64
CHL1-215ENST00000489224 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
CHL1-215ENST00000489224 ADAMTSL3P82987 1691 aa25.29■■□□□ 1.64
CHL1-215ENST00000489224 SPINK5Q9NQ38 1064 aaPredicted RBP25.28■■□□□ 1.64
CHL1-215ENST00000489224 ANO8Q9HCE9 1232 aaPredicted RBP25.28■■□□□ 1.64
CHL1-215ENST00000489224 DMRT2Q9Y5R5 561 aa25.28■■□□□ 1.64
CHL1-215ENST00000489224 NME9Q86XW9 330 aa25.27■■□□□ 1.64
CHL1-215ENST00000489224 CFAP53Q96M91 514 aa25.27■■□□□ 1.64
CHL1-215ENST00000489224 RRP7AQ9Y3A4 280 aaKnown RBP25.25■■□□□ 1.63
CHL1-215ENST00000489224 DUSP27Q5VZP5 1158 aa25.24■■□□□ 1.63
CHL1-215ENST00000489224 KCNA6P17658 529 aa25.24■■□□□ 1.63
CHL1-215ENST00000489224 NEUROD2Q15784 382 aa25.24■■□□□ 1.63
CHL1-215ENST00000489224 GOLGA2Q08379 1002 aa25.23■■□□□ 1.63
CHL1-215ENST00000489224 U2AF1L5P0DN76 240 aaPredicted RBP25.22■■□□□ 1.63
CHL1-215ENST00000489224 U2AF1Q01081 240 aaKnown RBP eCLIP25.22■■□□□ 1.63
CHL1-215ENST00000489224 B4GALNT3Q6L9W6 998 aa25.22■■□□□ 1.63
CHL1-215ENST00000489224 PPP4R2Q9NY27 417 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms