RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 KANK1Q14678 1352 aa25.05■■□□□ 1.6
HMG20B-213ENST00000488973 POGZQ7Z3K3 1410 aa25.04■■□□□ 1.6
HMG20B-213ENST00000488973 SBNO2Q9Y2G9 1366 aa25.03■■□□□ 1.6
HMG20B-213ENST00000488973 NEO1Q92859 1461 aa25.03■■□□□ 1.6
HMG20B-213ENST00000488973 BECN1Q14457 450 aa25.03■■□□□ 1.6
HMG20B-213ENST00000488973 ZMYM3Q14202 1370 aa25.03■■□□□ 1.6
HMG20B-213ENST00000488973 CANXP27824 592 aaKnown RBP25.03■■□□□ 1.6
HMG20B-213ENST00000488973 ZMYND15Q9H091 742 aa25.02■■□□□ 1.6
HMG20B-213ENST00000488973 COG6Q9Y2V7 657 aa25.02■■□□□ 1.6
HMG20B-213ENST00000488973 NLRP1Q9C000 1473 aa25.01■■□□□ 1.59
HMG20B-213ENST00000488973 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
HMG20B-213ENST00000488973 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
HMG20B-213ENST00000488973 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
HMG20B-213ENST00000488973 CFAP70Q5T0N1 1121 aa25.01■■□□□ 1.59
HMG20B-213ENST00000488973 PANK1Q8TE04 598 aa25.01■■□□□ 1.59
HMG20B-213ENST00000488973 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
HMG20B-213ENST00000488973 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
HMG20B-213ENST00000488973 MLH3Q9UHC1 1453 aa25■■□□□ 1.59
HMG20B-213ENST00000488973 PMFBP1Q8TBY8 1022 aa25■■□□□ 1.59
HMG20B-213ENST00000488973 SEC24BO95487 1268 aa24.98■■□□□ 1.59
HMG20B-213ENST00000488973 NRXN1Q9ULB1 1477 aa24.97■■□□□ 1.59
HMG20B-213ENST00000488973 IQSEC2Q5JU85 1478 aa24.96■■□□□ 1.59
HMG20B-213ENST00000488973 GLI2P10070 1586 aa24.96■■□□□ 1.59
HMG20B-213ENST00000488973 ADGRF5Q8IZF2 1346 aa24.96■■□□□ 1.59
HMG20B-213ENST00000488973 SETBP1Q9Y6X0 1596 aa24.95■■□□□ 1.59
HMG20B-213ENST00000488973 KIF3BO15066 747 aa24.95■■□□□ 1.59
HMG20B-213ENST00000488973 RARSP54136 660 aaKnown RBP24.95■■□□□ 1.59
HMG20B-213ENST00000488973 RUNDC1Q96C34 613 aa24.95■■□□□ 1.59
HMG20B-213ENST00000488973 MROH1Q8NDA8 1641 aa24.95■■□□□ 1.58
HMG20B-213ENST00000488973 ZC3H13Q5T200 1668 aaKnown RBP24.95■■□□□ 1.58
HMG20B-213ENST00000488973 MROH2AA6NES4 1674 aa24.95■■□□□ 1.58
HMG20B-213ENST00000488973 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
HMG20B-213ENST00000488973 UGGT1Q9NYU2 1555 aa24.94■■□□□ 1.58
HMG20B-213ENST00000488973 USP32Q8NFA0 1604 aa24.93■■□□□ 1.58
HMG20B-213ENST00000488973 WDR63Q8IWG1 891 aa24.93■■□□□ 1.58
HMG20B-213ENST00000488973 UPF2Q9HAU5 1272 aaKnown RBP24.91■■□□□ 1.58
HMG20B-213ENST00000488973 EFCAB6Q5THR3 1501 aa24.91■■□□□ 1.58
HMG20B-213ENST00000488973 NSD3Q9BZ95 1437 aa24.91■■□□□ 1.58
HMG20B-213ENST00000488973 HECW2Q9P2P5 1572 aa24.91■■□□□ 1.58
HMG20B-213ENST00000488973 MORC1Q86VD1 984 aa24.9■■□□□ 1.58
HMG20B-213ENST00000488973 FAM43AQ8N2R8 423 aa24.9■■□□□ 1.58
HMG20B-213ENST00000488973 CCDC27Q2M243 656 aa24.89■■□□□ 1.58
HMG20B-213ENST00000488973 QRICH2Q9H0J4 1663 aa24.89■■□□□ 1.57
HMG20B-213ENST00000488973 TCP11L2Q8N4U5 519 aa24.88■■□□□ 1.57
HMG20B-213ENST00000488973 PCDHB15Q9Y5E8 787 aa24.88■■□□□ 1.57
HMG20B-213ENST00000488973 NCBP3Q53F19 620 aaKnown RBP24.88■■□□□ 1.57
HMG20B-213ENST00000488973 TBC1D32Q96NH3 1257 aa24.88■■□□□ 1.57
HMG20B-213ENST00000488973 ANTXR1Q9H6X2 564 aa24.88■■□□□ 1.57
HMG20B-213ENST00000488973 VSIG10Q8N0Z9 540 aa24.87■■□□□ 1.57
HMG20B-213ENST00000488973 LMTK2Q8IWU2 1503 aa24.87■■□□□ 1.57
HMG20B-213ENST00000488973 RWDD1Q9H446 243 aaPredicted RBP24.86■■□□□ 1.57
HMG20B-213ENST00000488973 RLBP1P12271 317 aa24.85■■□□□ 1.57
HMG20B-213ENST00000488973 NEUROD2Q15784 382 aa24.85■■□□□ 1.57
HMG20B-213ENST00000488973 POGKQ9P215 609 aa24.85■■□□□ 1.57
HMG20B-213ENST00000488973 PDZRN3Q9UPQ7 1066 aa24.85■■□□□ 1.57
HMG20B-213ENST00000488973 PPRC1Q5VV67 1664 aaKnown RBP24.85■■□□□ 1.57
HMG20B-213ENST00000488973 FRMPD1Q5SYB0 1578 aa24.85■■□□□ 1.57
HMG20B-213ENST00000488973 ADGRB3O60242 1522 aa24.85■■□□□ 1.57
HMG20B-213ENST00000488973 SLKQ9H2G2 1235 aaPredicted RBP24.84■■□□□ 1.57
HMG20B-213ENST00000488973 RRP7AQ9Y3A4 280 aaKnown RBP24.84■■□□□ 1.57
HMG20B-213ENST00000488973 PPLO60437 1756 aa24.83■■□□□ 1.57
HMG20B-213ENST00000488973 L1TD1Q5T7N2 865 aaKnown RBP24.81■■□□□ 1.56
HMG20B-213ENST00000488973 MYH16Q9H6N6 1097 aa24.81■■□□□ 1.56
HMG20B-213ENST00000488973 NOS1P29475 1434 aa24.81■■□□□ 1.56
HMG20B-213ENST00000488973 RAPGEF3O95398 923 aa24.8■■□□□ 1.56
HMG20B-213ENST00000488973 CFAP53Q96M91 514 aa24.8■■□□□ 1.56
HMG20B-213ENST00000488973 TBC1D2Q9BYX2 928 aa24.8■■□□□ 1.56
HMG20B-213ENST00000488973 TNNQ9UQP3 1299 aa24.8■■□□□ 1.56
HMG20B-213ENST00000488973 SLC12A5Q9H2X9 1139 aa24.79■■□□□ 1.56
HMG20B-213ENST00000488973 DIP2BQ9P265 1576 aa24.79■■□□□ 1.56
HMG20B-213ENST00000488973 ADGRB2O60241 1585 aa24.78■■□□□ 1.56
HMG20B-213ENST00000488973 TNNT2P45379 298 aaPredicted RBP24.78■■□□□ 1.56
HMG20B-213ENST00000488973 ADGRB1O14514 1584 aa24.78■■□□□ 1.56
HMG20B-213ENST00000488973 MTHFSP49914 203 aa24.77■■□□□ 1.56
HMG20B-213ENST00000488973 MVPQ14764 893 aaKnown RBP24.77■■□□□ 1.56
HMG20B-213ENST00000488973 RICTORQ6R327 1708 aa24.77■■□□□ 1.56
HMG20B-213ENST00000488973 FAM69CQ0P6D2 419 aa24.76■■□□□ 1.55
HMG20B-213ENST00000488973 BCL2L13Q9BXK5 485 aa24.76■■□□□ 1.55
HMG20B-213ENST00000488973 CT47B1P0C2W7 299 aaPredicted RBP24.75■■□□□ 1.55
HMG20B-213ENST00000488973 C14orf93Q9H972 538 aaKnown RBP24.75■■□□□ 1.55
HMG20B-213ENST00000488973 TRAK1Q9UPV9 953 aa24.74■■□□□ 1.55
HMG20B-213ENST00000488973 NSD2O96028 1365 aa24.74■■□□□ 1.55
HMG20B-213ENST00000488973 DIP2CQ9Y2E4 1556 aa24.74■■□□□ 1.55
HMG20B-213ENST00000488973 ZKSCAN2Q63HK3 967 aa24.74■■□□□ 1.55
HMG20B-213ENST00000488973 PUS7Q96PZ0 661 aaKnown RBP24.73■■□□□ 1.55
HMG20B-213ENST00000488973 DZIP1LQ8IYY4 767 aaKnown RBP24.71■■□□□ 1.55
HMG20B-213ENST00000488973 FTSJ3Q8IY81 847 aaKnown RBP24.69■■□□□ 1.54
HMG20B-213ENST00000488973 CFAP65Q6ZU64 1925 aaKnown RBP24.68■■□□□ 1.54
HMG20B-213ENST00000488973 ANKRD36BQ8N2N9 1353 aa24.68■■□□□ 1.54
HMG20B-213ENST00000488973 HDAC1Q13547 482 aaPredicted RBP24.67■■□□□ 1.54
HMG20B-213ENST00000488973 ABCC3O15438 1527 aa24.67■■□□□ 1.54
HMG20B-213ENST00000488973 GGT6Q6P531 493 aa24.67■■□□□ 1.54
HMG20B-213ENST00000488973 C22orf23Q9BZE7 217 aa24.67■■□□□ 1.54
HMG20B-213ENST00000488973 ARHGEF28Q8N1W1 1705 aaKnown RBP24.67■■□□□ 1.54
HMG20B-213ENST00000488973 NPATQ14207 1427 aa24.66■■□□□ 1.54
HMG20B-213ENST00000488973 U2AF1L5P0DN76 240 aaPredicted RBP24.66■■□□□ 1.54
HMG20B-213ENST00000488973 U2AF1Q01081 240 aaKnown RBP eCLIP24.66■■□□□ 1.54
HMG20B-213ENST00000488973 RPGRIP1LQ68CZ1 1315 aa24.66■■□□□ 1.54
HMG20B-213ENST00000488973 MCM4P33991 863 aa24.66■■□□□ 1.54
HMG20B-213ENST00000488973 CHGAP10645 457 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms