RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 PKD2L1Q9P0L9 805 aa7.88□□□□□ -1.15
KDM3A-213ENST00000488971 MAP2K5Q13163 448 aa7.87□□□□□ -1.15
KDM3A-213ENST00000488971 RNF19BQ6ZMZ0 732 aa7.87□□□□□ -1.15
KDM3A-213ENST00000488971 CYP4X1Q8N118 509 aa7.87□□□□□ -1.15
KDM3A-213ENST00000488971 ARXQ96QS3 562 aa7.87□□□□□ -1.15
KDM3A-213ENST00000488971 ST8SIA5O15466 376 aa7.86□□□□□ -1.15
KDM3A-213ENST00000488971 Q3C1V9 767 aa7.86□□□□□ -1.15
KDM3A-213ENST00000488971 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
KDM3A-213ENST00000488971 POTECB2RU33 542 aa7.85□□□□□ -1.15
KDM3A-213ENST00000488971 CD46P15529 392 aa7.85□□□□□ -1.15
KDM3A-213ENST00000488971 IRF6O14896 467 aa7.84□□□□□ -1.15
KDM3A-213ENST00000488971 KDM4AO75164 1064 aa7.84□□□□□ -1.15
KDM3A-213ENST00000488971 MDM2Q00987 491 aaPredicted RBP7.84□□□□□ -1.15
KDM3A-213ENST00000488971 AAASQ9NRG9 546 aa7.84□□□□□ -1.15
KDM3A-213ENST00000488971 C14orf37Q86TY3 774 aa7.83□□□□□ -1.16
KDM3A-213ENST00000488971 TTC24A2A3L6 582 aaPredicted RBP7.82□□□□□ -1.16
KDM3A-213ENST00000488971 MINK1Q8N4C8 1332 aaPredicted RBP7.81□□□□□ -1.16
KDM3A-213ENST00000488971 USB1Q9BQ65 265 aaKnown RBP7.81□□□□□ -1.16
KDM3A-213ENST00000488971 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
KDM3A-213ENST00000488971 ZMYND10O75800 440 aa7.8□□□□□ -1.16
KDM3A-213ENST00000488971 USP46P62068 366 aa7.8□□□□□ -1.16
KDM3A-213ENST00000488971 KRI1Q8N9T8 703 aaKnown RBP7.8□□□□□ -1.16
KDM3A-213ENST00000488971 SLC24A3Q9HC58 644 aa7.8□□□□□ -1.16
KDM3A-213ENST00000488971 AXIN1O15169 862 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 MMP16P51512 607 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 NEUROD2Q15784 382 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 CCDC24Q8N4L8 307 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 CCDC102AQ96A19 550 aa7.79□□□□□ -1.16
KDM3A-213ENST00000488971 TRIM32Q13049 653 aa7.78□□□□□ -1.16
KDM3A-213ENST00000488971 HLA-CQ95604 372 aa7.78□□□□□ -1.16
KDM3A-213ENST00000488971 WNT7AO00755 349 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 AVPP01185 164 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 CLCN1P35523 988 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 CTC1Q2NKJ3 1217 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 NUTM1Q86Y26 1132 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 CRIPAKQ8N1N5 446 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 GPCPD1Q9NPB8 672 aa7.77□□□□□ -1.17
KDM3A-213ENST00000488971 HOXA2O43364 376 aa7.76□□□□□ -1.17
KDM3A-213ENST00000488971 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
KDM3A-213ENST00000488971 SNIP1Q8TAD8 396 aaKnown RBP7.76□□□□□ -1.17
KDM3A-213ENST00000488971 DACH1Q9UI36 760 aa7.76□□□□□ -1.17
KDM3A-213ENST00000488971 BARGINQ6ZT62 677 aa7.75□□□□□ -1.17
KDM3A-213ENST00000488971 C11orf95C9JLR9 678 aaPredicted RBP7.74□□□□□ -1.17
KDM3A-213ENST00000488971 GUCA2AQ02747 115 aa7.74□□□□□ -1.17
KDM3A-213ENST00000488971 MRGPRX2Q96LB1 330 aa7.74□□□□□ -1.17
KDM3A-213ENST00000488971 FAM217BQ9NTX9 383 aaPredicted RBP7.74□□□□□ -1.17
KDM3A-213ENST00000488971 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
KDM3A-213ENST00000488971 REPIN1Q9BWE0 567 aaKnown RBP7.73□□□□□ -1.17
KDM3A-213ENST00000488971 SMPD1P17405 629 aa7.72□□□□□ -1.17
KDM3A-213ENST00000488971 JUNDP17535 347 aa7.72□□□□□ -1.17
KDM3A-213ENST00000488971 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
KDM3A-213ENST00000488971 SYMPKQ92797 1274 aaKnown RBP7.72□□□□□ -1.17
KDM3A-213ENST00000488971 J3QL48 77 aa7.71□□□□□ -1.18
KDM3A-213ENST00000488971 RC3H1Q5TC82 1133 aaKnown RBP7.71□□□□□ -1.18
KDM3A-213ENST00000488971 TREML4Q6UXN2 200 aa7.71□□□□□ -1.18
KDM3A-213ENST00000488971 C6orf229H3BNL8 230 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 FDX1P10109 184 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 RETREG3Q86VR2 466 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 HOMEZQ8IX15 550 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 NUDT12Q9BQG2 462 aa7.69□□□□□ -1.18
KDM3A-213ENST00000488971 SSTR3P32745 418 aaPredicted RBP7.68□□□□□ -1.18
KDM3A-213ENST00000488971 WNT7BP56706 349 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 SKOR1P84550 965 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 HPS1Q92902 700 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 AK7Q96M32 723 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 ATP13A2Q9NQ11 1180 aa7.68□□□□□ -1.18
KDM3A-213ENST00000488971 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
KDM3A-213ENST00000488971 WFS1O76024 890 aa7.66□□□□□ -1.18
KDM3A-213ENST00000488971 ALDH1A1P00352 501 aa7.66□□□□□ -1.18
KDM3A-213ENST00000488971 MS4A1P11836 297 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 PTCRAQ6ISU1 281 aaPredicted RBP7.65□□□□□ -1.18
KDM3A-213ENST00000488971 EHBP1Q8NDI1 1231 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 SPIRE2Q8WWL2 714 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 PCDHGC3Q9UN70 934 aa7.65□□□□□ -1.18
KDM3A-213ENST00000488971 NDUFV2P19404 249 aa7.64□□□□□ -1.19
KDM3A-213ENST00000488971 CCNYL3P0C7X3 344 aa7.63□□□□□ -1.19
KDM3A-213ENST00000488971 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
KDM3A-213ENST00000488971 WASF2Q9Y6W5 498 aa7.63□□□□□ -1.19
KDM3A-213ENST00000488971 MOXD2PA6NHM9 499 aa7.62□□□□□ -1.19
KDM3A-213ENST00000488971 LCE2AQ5TA79 106 aaPredicted RBP7.62□□□□□ -1.19
KDM3A-213ENST00000488971 TRIM47Q96LD4 638 aa7.62□□□□□ -1.19
KDM3A-213ENST00000488971 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
KDM3A-213ENST00000488971 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
KDM3A-213ENST00000488971 GPBP1L1Q9HC44 474 aaPredicted RBP7.61□□□□□ -1.19
KDM3A-213ENST00000488971 PTPRNQ16849 979 aa7.6□□□□□ -1.19
KDM3A-213ENST00000488971 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
KDM3A-213ENST00000488971 GIGYF2Q6Y7W6 1299 aaKnown RBP7.6□□□□□ -1.19
KDM3A-213ENST00000488971 KDM4CQ9H3R0 1056 aa7.6□□□□□ -1.19
KDM3A-213ENST00000488971 TRIM66O15016 1216 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 SIAH2O43255 324 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 SH3BP2P78314 561 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
KDM3A-213ENST00000488971 MTMR2Q13614 643 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 AMHR2Q16671 573 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 BEGAINQ9BUH8 593 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 EVA1BQ9NVM1 165 aa7.59□□□□□ -1.19
KDM3A-213ENST00000488971 SPDYE5A6NIY4 337 aa7.58□□□□□ -1.2
KDM3A-213ENST00000488971 SUPT5HO00267 1087 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms