RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 ESCO1Q5FWF5 840 aa23.7■■□□□ 1.38
ERGIC3-217ENST00000488935 UPF1Q92900 1129 aaKnown RBP eCLIP23.7■■□□□ 1.38
ERGIC3-217ENST00000488935 QTRT2Q9H974 415 aaKnown RBP23.69■■□□□ 1.38
ERGIC3-217ENST00000488935 IFT172Q9UG01 1749 aa23.68■■□□□ 1.38
ERGIC3-217ENST00000488935 SOS2Q07890 1332 aaPredicted RBP23.68■■□□□ 1.38
ERGIC3-217ENST00000488935 NGLY1Q96IV0 654 aa23.68■■□□□ 1.38
ERGIC3-217ENST00000488935 FOXO3O43524 673 aa23.65■■□□□ 1.38
ERGIC3-217ENST00000488935 PRAG1Q86YV5 1406 aa23.64■■□□□ 1.37
ERGIC3-217ENST00000488935 LAMC1P11047 1609 aa23.63■■□□□ 1.37
ERGIC3-217ENST00000488935 LRPPRCP42704 1394 aaKnown RBP23.63■■□□□ 1.37
ERGIC3-217ENST00000488935 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
ERGIC3-217ENST00000488935 CFAP70Q5T0N1 1121 aa23.61■■□□□ 1.37
ERGIC3-217ENST00000488935 RGS12O14924 1447 aa23.6■■□□□ 1.37
ERGIC3-217ENST00000488935 SAFB2Q14151 953 aaKnown RBP eCLIP23.6■■□□□ 1.37
ERGIC3-217ENST00000488935 CDC42BPGQ6DT37 1551 aa23.6■■□□□ 1.37
ERGIC3-217ENST00000488935 PIK3C2GO75747 1445 aa23.59■■□□□ 1.37
ERGIC3-217ENST00000488935 PLEKHG5O94827 1062 aa23.59■■□□□ 1.37
ERGIC3-217ENST00000488935 RBM6P78332 1123 aaKnown RBP23.59■■□□□ 1.37
ERGIC3-217ENST00000488935 USP21Q9UK80 565 aa23.58■■□□□ 1.37
ERGIC3-217ENST00000488935 YTHDC2Q9H6S0 1430 aaKnown RBP23.58■■□□□ 1.36
ERGIC3-217ENST00000488935 ABCC11Q96J66 1382 aa23.57■■□□□ 1.36
ERGIC3-217ENST00000488935 TECPR2O15040 1411 aa23.57■■□□□ 1.36
ERGIC3-217ENST00000488935 NPHP3Q7Z494 1330 aa23.57■■□□□ 1.36
ERGIC3-217ENST00000488935 PXDNQ92626 1479 aa23.56■■□□□ 1.36
ERGIC3-217ENST00000488935 RAB3GAP2Q9H2M9 1393 aa23.56■■□□□ 1.36
ERGIC3-217ENST00000488935 RGPD8O14715 1765 aaPredicted RBP23.56■■□□□ 1.36
ERGIC3-217ENST00000488935 C14orf93Q9H972 538 aaKnown RBP23.55■■□□□ 1.36
ERGIC3-217ENST00000488935 KNDC1Q76NI1 1749 aa23.55■■□□□ 1.36
ERGIC3-217ENST00000488935 CDK12Q9NYV4 1490 aaPredicted RBP23.54■■□□□ 1.36
ERGIC3-217ENST00000488935 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
ERGIC3-217ENST00000488935 COL22A1Q8NFW1 1626 aaPredicted RBP23.51■■□□□ 1.35
ERGIC3-217ENST00000488935 KDM2AQ9Y2K7 1162 aa23.51■■□□□ 1.35
ERGIC3-217ENST00000488935 MYOM2P54296 1465 aa23.5■■□□□ 1.35
ERGIC3-217ENST00000488935 FNBP4Q8N3X1 1017 aaPredicted RBP23.5■■□□□ 1.35
ERGIC3-217ENST00000488935 PRAM1Q96QH2 718 aa23.5■■□□□ 1.35
ERGIC3-217ENST00000488935 KRT28Q7Z3Y7 464 aa23.49■■□□□ 1.35
ERGIC3-217ENST00000488935 TRPC5Q9UL62 973 aaPredicted RBP23.49■■□□□ 1.35
ERGIC3-217ENST00000488935 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
ERGIC3-217ENST00000488935 NRXN1Q9ULB1 1477 aa23.47■■□□□ 1.35
ERGIC3-217ENST00000488935 CABLES1Q8TDN4 633 aa23.46■■□□□ 1.35
ERGIC3-217ENST00000488935 MARF1Q9Y4F3 1742 aaKnown RBP23.46■■□□□ 1.35
ERGIC3-217ENST00000488935 ATRNO75882 1429 aa23.45■■□□□ 1.34
ERGIC3-217ENST00000488935 SPATA31A3Q5VYP0 1347 aa23.45■■□□□ 1.34
ERGIC3-217ENST00000488935 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
ERGIC3-217ENST00000488935 TRAK1Q9UPV9 953 aa23.45■■□□□ 1.34
ERGIC3-217ENST00000488935 BCL9LQ86UU0 1499 aa23.44■■□□□ 1.34
ERGIC3-217ENST00000488935 PMFBP1Q8TBY8 1022 aa23.44■■□□□ 1.34
ERGIC3-217ENST00000488935 POGKQ9P215 609 aa23.44■■□□□ 1.34
ERGIC3-217ENST00000488935 PHF8Q9UPP1 1060 aa23.44■■□□□ 1.34
ERGIC3-217ENST00000488935 LMOD2Q6P5Q4 547 aa23.43■■□□□ 1.34
ERGIC3-217ENST00000488935 DCAF11Q8TEB1 546 aa23.42■■□□□ 1.34
ERGIC3-217ENST00000488935 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
ERGIC3-217ENST00000488935 KIF1AQ12756 1690 aa23.4■■□□□ 1.34
ERGIC3-217ENST00000488935 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.34
ERGIC3-217ENST00000488935 HAP1P54257 671 aaPredicted RBP23.38■■□□□ 1.33
ERGIC3-217ENST00000488935 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
ERGIC3-217ENST00000488935 PSME1Q06323 249 aa23.37■■□□□ 1.33
ERGIC3-217ENST00000488935 GJD4Q96KN9 370 aaPredicted RBP23.37■■□□□ 1.33
ERGIC3-217ENST00000488935 ADGRB1O14514 1584 aa23.35■■□□□ 1.33
ERGIC3-217ENST00000488935 UNC5CLQ8IV45 518 aa23.35■■□□□ 1.33
ERGIC3-217ENST00000488935 ATAD2Q6PL18 1390 aa23.35■■□□□ 1.33
ERGIC3-217ENST00000488935 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
ERGIC3-217ENST00000488935 TNS3Q68CZ2 1445 aa23.34■■□□□ 1.33
ERGIC3-217ENST00000488935 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.32
ERGIC3-217ENST00000488935 SLIT2O94813 1529 aa23.32■■□□□ 1.32
ERGIC3-217ENST00000488935 DLC1Q96QB1 1528 aa23.32■■□□□ 1.32
ERGIC3-217ENST00000488935 GLI3P10071 1580 aa23.31■■□□□ 1.32
ERGIC3-217ENST00000488935 RALGAPBQ86X10 1494 aa23.31■■□□□ 1.32
ERGIC3-217ENST00000488935 EP400Q96L91 3159 aa23.3■■□□□ 1.32
ERGIC3-217ENST00000488935 CCDC9Q9Y3X0 531 aaKnown RBP23.29■■□□□ 1.32
ERGIC3-217ENST00000488935 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
ERGIC3-217ENST00000488935 ABCA3Q99758 1704 aa23.28■■□□□ 1.32
ERGIC3-217ENST00000488935 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.28■■□□□ 1.32
ERGIC3-217ENST00000488935 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
ERGIC3-217ENST00000488935 SBNO1A3KN83 1393 aa23.27■■□□□ 1.31
ERGIC3-217ENST00000488935 PLCH1Q4KWH8 1693 aa23.26■■□□□ 1.31
ERGIC3-217ENST00000488935 WASLO00401 505 aaPredicted RBP23.26■■□□□ 1.31
ERGIC3-217ENST00000488935 ADGRB2O60241 1585 aa23.25■■□□□ 1.31
ERGIC3-217ENST00000488935 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
ERGIC3-217ENST00000488935 SEPT12Q8IYM1 358 aa23.24■■□□□ 1.31
ERGIC3-217ENST00000488935 TRPM3Q9HCF6 1732 aaPredicted RBP23.24■■□□□ 1.31
ERGIC3-217ENST00000488935 PAK3O75914 559 aaPredicted RBP23.23■■□□□ 1.31
ERGIC3-217ENST00000488935 NGDNQ8NEJ9 315 aaKnown RBP23.22■■□□□ 1.31
ERGIC3-217ENST00000488935 ARHGEF10O15013 1369 aa23.22■■□□□ 1.31
ERGIC3-217ENST00000488935 VPS72Q15906 364 aa23.21■■□□□ 1.31
ERGIC3-217ENST00000488935 ARHGEF28Q8N1W1 1705 aaKnown RBP23.21■■□□□ 1.31
ERGIC3-217ENST00000488935 TULP4Q9NRJ4 1543 aa23.2■■□□□ 1.3
ERGIC3-217ENST00000488935 GPRASP1Q5JY77 1395 aa23.19■■□□□ 1.3
ERGIC3-217ENST00000488935 HRCP23327 699 aa23.19■■□□□ 1.3
ERGIC3-217ENST00000488935 DEFB132Q7Z7B7 95 aa23.19■■□□□ 1.3
ERGIC3-217ENST00000488935 BTG4Q9NY30 223 aa23.19■■□□□ 1.3
ERGIC3-217ENST00000488935 ALS2Q96Q42 1657 aa23.19■■□□□ 1.3
ERGIC3-217ENST00000488935 A0A0G2JS52 829 aa23.18■■□□□ 1.3
ERGIC3-217ENST00000488935 MYT1Q01538 1121 aa23.18■■□□□ 1.3
ERGIC3-217ENST00000488935 NBPF1Q3BBV0 1214 aa23.18■■□□□ 1.3
ERGIC3-217ENST00000488935 NUTM2GQ5VZR2 741 aa23.18■■□□□ 1.3
ERGIC3-217ENST00000488935 NUDT16Q96DE0 195 aaKnown RBP23.18■■□□□ 1.3
ERGIC3-217ENST00000488935 NWD2Q9ULI1 1742 aa23.17■■□□□ 1.3
ERGIC3-217ENST00000488935 SRCAPQ6ZRS2 3230 aa23.16■■□□□ 1.3
ERGIC3-217ENST00000488935 CDK19Q9BWU1 502 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms