RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 RCCD1A6NED2 376 aa8.45□□□□□ -1.06
SF3A3-207ENST00000488934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.45□□□□□ -1.06
SF3A3-207ENST00000488934 TMEM134Q9H6X4 195 aa8.45□□□□□ -1.06
SF3A3-207ENST00000488934 RSPH4AQ5TD94 716 aa8.44□□□□□ -1.06
SF3A3-207ENST00000488934 LMOD2Q6P5Q4 547 aa8.44□□□□□ -1.06
SF3A3-207ENST00000488934 PXYLP1Q8TE99 480 aa8.44□□□□□ -1.06
SF3A3-207ENST00000488934 PTPRGP23470 1445 aa8.44□□□□□ -1.06
SF3A3-207ENST00000488934 ADCY10Q96PN6 1610 aa8.43□□□□□ -1.06
SF3A3-207ENST00000488934 METTL3Q86U44 580 aaKnown RBP8.43□□□□□ -1.06
SF3A3-207ENST00000488934 FAM9AQ8IZU1 332 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-207ENST00000488934 DISP1Q96F81 1524 aa8.43□□□□□ -1.06
SF3A3-207ENST00000488934 MAP2K5Q13163 448 aa8.42□□□□□ -1.06
SF3A3-207ENST00000488934 FAM161AQ3B820 660 aa8.42□□□□□ -1.06
SF3A3-207ENST00000488934 MAPKBP1O60336 1514 aa8.42□□□□□ -1.06
SF3A3-207ENST00000488934 FECHP22830 423 aa8.41□□□□□ -1.06
SF3A3-207ENST00000488934 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
SF3A3-207ENST00000488934 UHRF1BP1LA0JNW5 1464 aa8.4□□□□□ -1.06
SF3A3-207ENST00000488934 MINK1Q8N4C8 1332 aaPredicted RBP8.4□□□□□ -1.06
SF3A3-207ENST00000488934 ITGBL1O95965 494 aaPredicted RBP8.4□□□□□ -1.06
SF3A3-207ENST00000488934 ABCC2Q92887 1545 aa8.39□□□□□ -1.07
SF3A3-207ENST00000488934 UACAQ9BZF9 1416 aa8.39□□□□□ -1.07
SF3A3-207ENST00000488934 KCNC4Q03721 635 aa8.39□□□□□ -1.07
SF3A3-207ENST00000488934 KMT5BQ4FZB7 885 aa8.39□□□□□ -1.07
SF3A3-207ENST00000488934 SAMD9Q5K651 1589 aa8.39□□□□□ -1.07
SF3A3-207ENST00000488934 KIF13AQ9H1H9 1805 aa8.38□□□□□ -1.07
SF3A3-207ENST00000488934 BCANQ96GW7 911 aa8.38□□□□□ -1.07
SF3A3-207ENST00000488934 EFCAB5A4FU69 1503 aa8.38□□□□□ -1.07
SF3A3-207ENST00000488934 SULF1Q8IWU6 871 aa8.37□□□□□ -1.07
SF3A3-207ENST00000488934 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
SF3A3-207ENST00000488934 IRF6O14896 467 aa8.36□□□□□ -1.07
SF3A3-207ENST00000488934 KRI1Q8N9T8 703 aaKnown RBP8.36□□□□□ -1.07
SF3A3-207ENST00000488934 DIP2BQ9P265 1576 aa8.35□□□□□ -1.07
SF3A3-207ENST00000488934 TTBK1Q5TCY1 1321 aaPredicted RBP8.35□□□□□ -1.07
SF3A3-207ENST00000488934 KDM5BQ9UGL1 1544 aa8.35□□□□□ -1.07
SF3A3-207ENST00000488934 ABCC10Q5T3U5 1492 aa8.35□□□□□ -1.07
SF3A3-207ENST00000488934 PLB1Q6P1J6 1458 aa8.35□□□□□ -1.07
SF3A3-207ENST00000488934 APLP1P51693 650 aa8.35□□□□□ -1.07
SF3A3-207ENST00000488934 IL21Q9HBE4 155 aa8.35□□□□□ -1.07
SF3A3-207ENST00000488934 ZCCHC11Q5TAX3 1644 aaKnown RBP8.35□□□□□ -1.07
SF3A3-207ENST00000488934 CFHP08603 1231 aa8.34□□□□□ -1.07
SF3A3-207ENST00000488934 RDH13Q8NBN7 331 aa8.34□□□□□ -1.07
SF3A3-207ENST00000488934 PCDHB3Q9Y5E6 796 aa8.34□□□□□ -1.07
SF3A3-207ENST00000488934 ABCA8O94911 1581 aa8.34□□□□□ -1.07
SF3A3-207ENST00000488934 CCDC102AQ96A19 550 aa8.33□□□□□ -1.08
SF3A3-207ENST00000488934 ASXL2Q76L83 1435 aa8.32□□□□□ -1.08
SF3A3-207ENST00000488934 UBTFP17480 764 aaKnown RBP8.32□□□□□ -1.08
SF3A3-207ENST00000488934 ZC3H15Q8WU90 426 aaKnown RBP8.32□□□□□ -1.08
SF3A3-207ENST00000488934 MTRQ99707 1265 aa8.32□□□□□ -1.08
SF3A3-207ENST00000488934 RAPGEF6Q8TEU7 1601 aa8.32□□□□□ -1.08
SF3A3-207ENST00000488934 GLI2P10070 1586 aa8.31□□□□□ -1.08
SF3A3-207ENST00000488934 A0A0G2JS52 829 aa8.31□□□□□ -1.08
SF3A3-207ENST00000488934 DDX11L8A8MPP1 907 aa8.31□□□□□ -1.08
SF3A3-207ENST00000488934 ACTN4O43707 911 aaKnown RBP8.31□□□□□ -1.08
SF3A3-207ENST00000488934 ZMYND10O75800 440 aa8.31□□□□□ -1.08
SF3A3-207ENST00000488934 BARGINQ6ZT62 677 aa8.31□□□□□ -1.08
SF3A3-207ENST00000488934 RGS20O76081 388 aa8.3□□□□□ -1.08
SF3A3-207ENST00000488934 FAM69CQ0P6D2 419 aa8.3□□□□□ -1.08
SF3A3-207ENST00000488934 TJAP1Q5JTD0 557 aa8.3□□□□□ -1.08
SF3A3-207ENST00000488934 WDR7Q9Y4E6 1490 aa8.3□□□□□ -1.08
SF3A3-207ENST00000488934 SLC10A3P09131 477 aa8.29□□□□□ -1.08
SF3A3-207ENST00000488934 CLCN1P35523 988 aa8.29□□□□□ -1.08
SF3A3-207ENST00000488934 PHOX2BQ99453 314 aa8.29□□□□□ -1.08
SF3A3-207ENST00000488934 TSPOAP1O95153 1857 aa8.29□□□□□ -1.08
SF3A3-207ENST00000488934 FMN1Q68DA7 1419 aa8.29□□□□□ -1.08
SF3A3-207ENST00000488934 CFAP43Q8NDM7 1665 aa8.28□□□□□ -1.08
SF3A3-207ENST00000488934 NR1I2O75469 434 aa8.28□□□□□ -1.08
SF3A3-207ENST00000488934 COPS2P61201 443 aa8.28□□□□□ -1.08
SF3A3-207ENST00000488934 FHOD3Q2V2M9 1422 aa8.28□□□□□ -1.08
SF3A3-207ENST00000488934 GGCXP38435 758 aa8.27□□□□□ -1.09
SF3A3-207ENST00000488934 MDM2Q00987 491 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-207ENST00000488934 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
SF3A3-207ENST00000488934 NLRP7Q8WX94 980 aa8.27□□□□□ -1.09
SF3A3-207ENST00000488934 GPCPD1Q9NPB8 672 aa8.27□□□□□ -1.09
SF3A3-207ENST00000488934 HECW1Q76N89 1606 aa8.27□□□□□ -1.09
SF3A3-207ENST00000488934 MAP3K4Q9Y6R4 1608 aa8.27□□□□□ -1.09
SF3A3-207ENST00000488934 EPRSP07814 1512 aaKnown RBP8.27□□□□□ -1.09
SF3A3-207ENST00000488934 TEX14Q8IWB6 1497 aa8.26□□□□□ -1.09
SF3A3-207ENST00000488934 ZPR1O75312 459 aa8.26□□□□□ -1.09
SF3A3-207ENST00000488934 RANGAP1P46060 587 aaPredicted RBP8.26□□□□□ -1.09
SF3A3-207ENST00000488934 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
SF3A3-207ENST00000488934 ARHGAP35Q9NRY4 1499 aa8.25□□□□□ -1.09
SF3A3-207ENST00000488934 KDM6BO15054 1643 aa8.25□□□□□ -1.09
SF3A3-207ENST00000488934 GCGRP47871 477 aa8.24□□□□□ -1.09
SF3A3-207ENST00000488934 TTLL12Q14166 644 aaPredicted RBP8.24□□□□□ -1.09
SF3A3-207ENST00000488934 ATP10BO94823 1461 aa8.24□□□□□ -1.09
SF3A3-207ENST00000488934 NUP153P49790 1475 aaKnown RBP8.24□□□□□ -1.09
SF3A3-207ENST00000488934 PPRC1Q5VV67 1664 aaKnown RBP8.24□□□□□ -1.09
SF3A3-207ENST00000488934 AK7Q96M32 723 aa8.23□□□□□ -1.09
SF3A3-207ENST00000488934 ABCA9Q8IUA7 1624 aa8.22□□□□□ -1.09
SF3A3-207ENST00000488934 CD46P15529 392 aa8.22□□□□□ -1.09
SF3A3-207ENST00000488934 ATP6V1AP38606 617 aa8.22□□□□□ -1.09
SF3A3-207ENST00000488934 AMHR2Q16671 573 aa8.22□□□□□ -1.09
SF3A3-207ENST00000488934 ZNF516Q92618 1163 aa8.22□□□□□ -1.09
SF3A3-207ENST00000488934 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.1
SF3A3-207ENST00000488934 USP46P62068 366 aa8.21□□□□□ -1.1
SF3A3-207ENST00000488934 PLEKHD1A6NEE1 506 aa8.2□□□□□ -1.1
SF3A3-207ENST00000488934 FUT2Q10981 343 aa8.2□□□□□ -1.1
SF3A3-207ENST00000488934 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
SF3A3-207ENST00000488934 FAM217BQ9NTX9 383 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-207ENST00000488934 CDK11AQ9UQ88 783 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms