RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SKIV2LQ15477 1246 aaKnown RBP8.7□□□□□ -1.02
SSR1-209ENST00000488834 PCMTD1Q96MG8 357 aaPredicted RBP8.7□□□□□ -1.02
SSR1-209ENST00000488834 NUTM2BA6NNL0 878 aaPredicted RBP8.69□□□□□ -1.02
SSR1-209ENST00000488834 NUTM2EB1AL46 878 aaPredicted RBP8.69□□□□□ -1.02
SSR1-209ENST00000488834 PPEF1O14829 653 aaPredicted RBP8.69□□□□□ -1.02
SSR1-209ENST00000488834 SPTLC1O15269 473 aa8.69□□□□□ -1.02
SSR1-209ENST00000488834 GJA5P36382 358 aa8.69□□□□□ -1.02
SSR1-209ENST00000488834 NUTM2DQ5VT03 806 aaPredicted RBP8.69□□□□□ -1.02
SSR1-209ENST00000488834 NUTM2AQ8IVF1 878 aaPredicted RBP8.69□□□□□ -1.02
SSR1-209ENST00000488834 SPSB2Q99619 263 aa8.69□□□□□ -1.02
SSR1-209ENST00000488834 LIMD1Q9UGP4 676 aa8.68□□□□□ -1.02
SSR1-209ENST00000488834 S1PR4O95977 384 aa8.67□□□□□ -1.02
SSR1-209ENST00000488834 ADH1BP00325 375 aa8.67□□□□□ -1.02
SSR1-209ENST00000488834 MTMR2Q13614 643 aa8.67□□□□□ -1.02
SSR1-209ENST00000488834 RNF19BQ6ZMZ0 732 aa8.67□□□□□ -1.02
SSR1-209ENST00000488834 THAP11Q96EK4 314 aa8.67□□□□□ -1.02
SSR1-209ENST00000488834 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
SSR1-209ENST00000488834 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
SSR1-209ENST00000488834 PLA2G2CQ5R387 149 aa8.66□□□□□ -1.02
SSR1-209ENST00000488834 BRICD5Q6PL45 260 aa8.66□□□□□ -1.02
SSR1-209ENST00000488834 GOPCQ9HD26 462 aa8.66□□□□□ -1.02
SSR1-209ENST00000488834 PRDM9Q9NQV7 894 aa8.66□□□□□ -1.02
SSR1-209ENST00000488834 PCDHGC3Q9UN70 934 aa8.66□□□□□ -1.02
SSR1-209ENST00000488834 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
SSR1-209ENST00000488834 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
SSR1-209ENST00000488834 SPDYE5A6NIY4 337 aa8.65□□□□□ -1.02
SSR1-209ENST00000488834 GGCXP38435 758 aa8.65□□□□□ -1.02
SSR1-209ENST00000488834 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.02
SSR1-209ENST00000488834 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
SSR1-209ENST00000488834 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.65□□□□□ -1.02
SSR1-209ENST00000488834 TMEM132AQ24JP5 1023 aa8.64□□□□□ -1.03
SSR1-209ENST00000488834 PRPF38BQ5VTL8 546 aaKnown RBP8.64□□□□□ -1.03
SSR1-209ENST00000488834 RETREG3Q86VR2 466 aa8.64□□□□□ -1.03
SSR1-209ENST00000488834 FAM160A2Q8N612 972 aaPredicted RBP8.64□□□□□ -1.03
SSR1-209ENST00000488834 PROCA1Q8NCQ7 364 aaPredicted RBP8.64□□□□□ -1.03
SSR1-209ENST00000488834 CABLES1Q8TDN4 633 aa8.64□□□□□ -1.03
SSR1-209ENST00000488834 TSC1Q92574 1164 aa8.64□□□□□ -1.03
SSR1-209ENST00000488834 SLC6A16Q9GZN6 736 aa8.64□□□□□ -1.03
SSR1-209ENST00000488834 HRCP23327 699 aa8.63□□□□□ -1.03
SSR1-209ENST00000488834 TUSC1Q2TAM9 212 aa8.63□□□□□ -1.03
SSR1-209ENST00000488834 LCE2BO14633 110 aa8.62□□□□□ -1.03
SSR1-209ENST00000488834 QPCTQ16769 361 aa8.62□□□□□ -1.03
SSR1-209ENST00000488834 PRKD2Q9BZL6 878 aa8.62□□□□□ -1.03
SSR1-209ENST00000488834 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
SSR1-209ENST00000488834 LILRB3O75022 631 aa8.6□□□□□ -1.03
SSR1-209ENST00000488834 MSS51Q4VC12 460 aa8.6□□□□□ -1.03
SSR1-209ENST00000488834 RGS20O76081 388 aa8.59□□□□□ -1.03
SSR1-209ENST00000488834 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
SSR1-209ENST00000488834 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
SSR1-209ENST00000488834 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
SSR1-209ENST00000488834 RTL5Q5HYW3 569 aaPredicted RBP8.58□□□□□ -1.04
SSR1-209ENST00000488834 JUNDP17535 347 aa8.57□□□□□ -1.04
SSR1-209ENST00000488834 TRIM67Q6ZTA4 783 aa8.57□□□□□ -1.04
SSR1-209ENST00000488834 CFAP99D6REC4 459 aa8.56□□□□□ -1.04
SSR1-209ENST00000488834 AP1G2O75843 785 aa8.56□□□□□ -1.04
SSR1-209ENST00000488834 RFC5P40937 340 aa8.55□□□□□ -1.04
SSR1-209ENST00000488834 CCDC24Q8N4L8 307 aa8.55□□□□□ -1.04
SSR1-209ENST00000488834 PPP2R2DQ66LE6 453 aa8.54□□□□□ -1.04
SSR1-209ENST00000488834 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
SSR1-209ENST00000488834 DXOO77932 396 aaKnown RBP8.53□□□□□ -1.04
SSR1-209ENST00000488834 MMP16P51512 607 aa8.53□□□□□ -1.04
SSR1-209ENST00000488834 DESI1Q6ICB0 168 aa8.53□□□□□ -1.04
SSR1-209ENST00000488834 IRX2Q9BZI1 471 aaPredicted RBP8.53□□□□□ -1.04
SSR1-209ENST00000488834 TMEM259Q4ZIN3 620 aa8.52□□□□□ -1.05
SSR1-209ENST00000488834 ANKLE1Q8NAG6 615 aa8.52□□□□□ -1.05
SSR1-209ENST00000488834 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
SSR1-209ENST00000488834 ZBTB24O43167 697 aaPredicted RBP8.51□□□□□ -1.05
SSR1-209ENST00000488834 CCNYL3P0C7X3 344 aa8.51□□□□□ -1.05
SSR1-209ENST00000488834 CTHP32929 405 aa8.51□□□□□ -1.05
SSR1-209ENST00000488834 PTPRNQ16849 979 aa8.51□□□□□ -1.05
SSR1-209ENST00000488834 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
SSR1-209ENST00000488834 SLC19A1P41440 591 aa8.5□□□□□ -1.05
SSR1-209ENST00000488834 CTDSPL2Q05D32 466 aa8.5□□□□□ -1.05
SSR1-209ENST00000488834 FBXO31Q5XUX0 539 aaPredicted RBP8.5□□□□□ -1.05
SSR1-209ENST00000488834 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
SSR1-209ENST00000488834 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
SSR1-209ENST00000488834 SPRYD7Q5W111 196 aa8.48□□□□□ -1.05
SSR1-209ENST00000488834 USP17L8P0C7I0 530 aa8.47□□□□□ -1.05
SSR1-209ENST00000488834 GFRA3O60609 400 aa8.46□□□□□ -1.06
SSR1-209ENST00000488834 LRRN4Q8WUT4 740 aa8.46□□□□□ -1.06
SSR1-209ENST00000488834 APBB1O00213 710 aa8.45□□□□□ -1.06
SSR1-209ENST00000488834 BANK1Q8NDB2 785 aa8.45□□□□□ -1.06
SSR1-209ENST00000488834 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
SSR1-209ENST00000488834 PKD2L1Q9P0L9 805 aa8.45□□□□□ -1.06
SSR1-209ENST00000488834 TNFRSF10AO00220 468 aa8.44□□□□□ -1.06
SSR1-209ENST00000488834 KCNH2Q12809 1159 aa8.44□□□□□ -1.06
SSR1-209ENST00000488834 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
SSR1-209ENST00000488834 MAP10Q9P2G4 905 aa8.44□□□□□ -1.06
SSR1-209ENST00000488834 GDF9O60383 454 aa8.43□□□□□ -1.06
SSR1-209ENST00000488834 CD2BP2O95400 341 aaKnown RBP8.43□□□□□ -1.06
SSR1-209ENST00000488834 PTCRAQ6ISU1 281 aaPredicted RBP8.43□□□□□ -1.06
SSR1-209ENST00000488834 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
SSR1-209ENST00000488834 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
SSR1-209ENST00000488834 RPIAP49247 311 aa8.42□□□□□ -1.06
SSR1-209ENST00000488834 ZNF598Q86UK7 904 aaKnown RBP8.42□□□□□ -1.06
SSR1-209ENST00000488834 UNC93B1Q9H1C4 597 aa8.42□□□□□ -1.06
SSR1-209ENST00000488834 F12P00748 615 aaPredicted RBP8.41□□□□□ -1.06
SSR1-209ENST00000488834 TRIM32Q13049 653 aa8.41□□□□□ -1.06
SSR1-209ENST00000488834 NR6A1Q15406 480 aa8.41□□□□□ -1.06
SSR1-209ENST00000488834 ARMC2Q8NEN0 867 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms