RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 NRXN3Q9Y4C0 1643 aa15.9■□□□□ 0.14
NUP98-212ENST00000488828 C14orf93Q9H972 538 aaKnown RBP15.9■□□□□ 0.14
NUP98-212ENST00000488828 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
NUP98-212ENST00000488828 C19orf44Q9H6X5 657 aa15.89■□□□□ 0.13
NUP98-212ENST00000488828 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
NUP98-212ENST00000488828 NWD1Q149M9 1564 aa15.87■□□□□ 0.13
NUP98-212ENST00000488828 L3MBTL2Q969R5 705 aa15.87■□□□□ 0.13
NUP98-212ENST00000488828 SLAIN2Q9P270 581 aa15.87■□□□□ 0.13
NUP98-212ENST00000488828 PIK3C2GO75747 1445 aa15.86■□□□□ 0.13
NUP98-212ENST00000488828 CADPS2Q86UW7 1296 aa15.86■□□□□ 0.13
NUP98-212ENST00000488828 MYOM2P54296 1465 aa15.85■□□□□ 0.13
NUP98-212ENST00000488828 NCOA3Q9Y6Q9 1424 aa15.85■□□□□ 0.13
NUP98-212ENST00000488828 WAPLQ7Z5K2 1190 aa15.84■□□□□ 0.13
NUP98-212ENST00000488828 IFT172Q9UG01 1749 aa15.84■□□□□ 0.13
NUP98-212ENST00000488828 POGKQ9P215 609 aa15.83■□□□□ 0.12
NUP98-212ENST00000488828 ROBO2Q9HCK4 1378 aa15.83■□□□□ 0.12
NUP98-212ENST00000488828 HSPA1LP34931 641 aa15.82■□□□□ 0.12
NUP98-212ENST00000488828 SAFB2Q14151 953 aaKnown RBP eCLIP15.82■□□□□ 0.12
NUP98-212ENST00000488828 TRAK1Q9UPV9 953 aa15.82■□□□□ 0.12
NUP98-212ENST00000488828 LRPPRCP42704 1394 aaKnown RBP15.82■□□□□ 0.12
NUP98-212ENST00000488828 XIRP1Q702N8 1843 aaKnown RBP15.82■□□□□ 0.12
NUP98-212ENST00000488828 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
NUP98-212ENST00000488828 YTHDC2Q9H6S0 1430 aaKnown RBP15.81■□□□□ 0.12
NUP98-212ENST00000488828 NRXN1Q9ULB1 1477 aa15.81■□□□□ 0.12
NUP98-212ENST00000488828 TONSLQ96HA7 1378 aa15.8■□□□□ 0.12
NUP98-212ENST00000488828 ABCC11Q96J66 1382 aa15.8■□□□□ 0.12
NUP98-212ENST00000488828 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
NUP98-212ENST00000488828 XRN1Q8IZH2 1706 aaKnown RBP15.8■□□□□ 0.12
NUP98-212ENST00000488828 REM2Q8IYK8 340 aaPredicted RBP15.79■□□□□ 0.12
NUP98-212ENST00000488828 PRAM1Q96QH2 718 aa15.79■□□□□ 0.12
NUP98-212ENST00000488828 PTCH1Q13635 1447 aa15.77■□□□□ 0.12
NUP98-212ENST00000488828 SETD1AO15047 1707 aaKnown RBP15.77■□□□□ 0.12
NUP98-212ENST00000488828 NBPF1Q3BBV0 1214 aa15.77■□□□□ 0.12
NUP98-212ENST00000488828 SIRT1Q96EB6 747 aa15.77■□□□□ 0.12
NUP98-212ENST00000488828 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
NUP98-212ENST00000488828 FAM135BQ49AJ0 1406 aa15.76■□□□□ 0.11
NUP98-212ENST00000488828 ADGRL3Q9HAR2 1447 aa15.76■□□□□ 0.11
NUP98-212ENST00000488828 PLEKHH1Q9ULM0 1364 aa15.75■□□□□ 0.11
NUP98-212ENST00000488828 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.75■□□□□ 0.11
NUP98-212ENST00000488828 LAMC1P11047 1609 aa15.75■□□□□ 0.11
NUP98-212ENST00000488828 PRAG1Q86YV5 1406 aa15.74■□□□□ 0.11
NUP98-212ENST00000488828 ASXL1Q8IXJ9 1541 aa15.73■□□□□ 0.11
NUP98-212ENST00000488828 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
NUP98-212ENST00000488828 TECPR2O15040 1411 aa15.73■□□□□ 0.11
NUP98-212ENST00000488828 MINK1Q8N4C8 1332 aaPredicted RBP15.72■□□□□ 0.11
NUP98-212ENST00000488828 DCCP43146 1447 aa15.72■□□□□ 0.11
NUP98-212ENST00000488828 ESCO1Q5FWF5 840 aa15.72■□□□□ 0.11
NUP98-212ENST00000488828 BRINP3Q76B58 766 aa15.71■□□□□ 0.11
NUP98-212ENST00000488828 ORAI2Q96SN7 254 aa15.7■□□□□ 0.1
NUP98-212ENST00000488828 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
NUP98-212ENST00000488828 ROCK2O75116 1388 aaKnown RBP15.69■□□□□ 0.1
NUP98-212ENST00000488828 ADGRB1O14514 1584 aa15.69■□□□□ 0.1
NUP98-212ENST00000488828 ROBO1Q9Y6N7 1651 aa15.69■□□□□ 0.1
NUP98-212ENST00000488828 MST1RQ04912 1400 aa15.68■□□□□ 0.1
NUP98-212ENST00000488828 NALCNQ8IZF0 1738 aa15.68■□□□□ 0.1
NUP98-212ENST00000488828 CLSPNQ9HAW4 1339 aa15.68■□□□□ 0.1
NUP98-212ENST00000488828 DDX17Q92841 729 aaKnown RBP15.67■□□□□ 0.1
NUP98-212ENST00000488828 C1orf167Q5SNV9 1468 aa15.66■□□□□ 0.1
NUP98-212ENST00000488828 CARD11Q9BXL7 1154 aa15.66■□□□□ 0.1
NUP98-212ENST00000488828 KNDC1Q76NI1 1749 aa15.65■□□□□ 0.1
NUP98-212ENST00000488828 DLC1Q96QB1 1528 aa15.65■□□□□ 0.1
NUP98-212ENST00000488828 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
NUP98-212ENST00000488828 WASLO00401 505 aaPredicted RBP15.64■□□□□ 0.09
NUP98-212ENST00000488828 FOXO3O43524 673 aa15.64■□□□□ 0.09
NUP98-212ENST00000488828 CENPJQ9HC77 1338 aaPredicted RBP15.64■□□□□ 0.09
NUP98-212ENST00000488828 PITPNM1O00562 1244 aa15.63■□□□□ 0.09
NUP98-212ENST00000488828 TIMELESSQ9UNS1 1208 aa15.63■□□□□ 0.09
NUP98-212ENST00000488828 KIAA1210Q9ULL0 1709 aa15.63■□□□□ 0.09
NUP98-212ENST00000488828 XPCQ01831 940 aaPredicted RBP15.62■□□□□ 0.09
NUP98-212ENST00000488828 LRRC59Q96AG4 307 aaKnown RBP15.62■□□□□ 0.09
NUP98-212ENST00000488828 CDK19Q9BWU1 502 aa15.62■□□□□ 0.09
NUP98-212ENST00000488828 PHF8Q9UPP1 1060 aa15.62■□□□□ 0.09
NUP98-212ENST00000488828 PHLPP1O60346 1717 aa15.61■□□□□ 0.09
NUP98-212ENST00000488828 SRPK2P78362 688 aaKnown RBP15.61■□□□□ 0.09
NUP98-212ENST00000488828 PMFBP1Q8TBY8 1022 aa15.61■□□□□ 0.09
NUP98-212ENST00000488828 CDC42BPGQ6DT37 1551 aa15.61■□□□□ 0.09
NUP98-212ENST00000488828 PSME1Q06323 249 aa15.6■□□□□ 0.09
NUP98-212ENST00000488828 SPDYE1Q8NFV5 336 aaPredicted RBP15.6■□□□□ 0.09
NUP98-212ENST00000488828 NPHP3Q7Z494 1330 aa15.6■□□□□ 0.09
NUP98-212ENST00000488828 DISP3Q9P2K9 1392 aa15.6■□□□□ 0.09
NUP98-212ENST00000488828 NUTM2BA6NNL0 878 aaPredicted RBP15.59■□□□□ 0.09
NUP98-212ENST00000488828 NUTM2EB1AL46 878 aaPredicted RBP15.59■□□□□ 0.09
NUP98-212ENST00000488828 NUTM2AQ8IVF1 878 aaPredicted RBP15.59■□□□□ 0.09
NUP98-212ENST00000488828 PROM2Q8N271 834 aa15.59■□□□□ 0.09
NUP98-212ENST00000488828 EIF3AQ14152 1382 aaKnown RBP15.59■□□□□ 0.09
NUP98-212ENST00000488828 JCADQ9P266 1359 aa15.59■□□□□ 0.09
NUP98-212ENST00000488828 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
NUP98-212ENST00000488828 NGDNQ8NEJ9 315 aaKnown RBP15.58■□□□□ 0.08
NUP98-212ENST00000488828 NUDT16Q96DE0 195 aaKnown RBP15.58■□□□□ 0.08
NUP98-212ENST00000488828 TRPM1Q7Z4N2 1603 aa15.57■□□□□ 0.08
NUP98-212ENST00000488828 MEX3CQ5U5Q3 659 aaKnown RBP15.57■□□□□ 0.08
NUP98-212ENST00000488828 LMOD2Q6P5Q4 547 aa15.57■□□□□ 0.08
NUP98-212ENST00000488828 KRT28Q7Z3Y7 464 aa15.57■□□□□ 0.08
NUP98-212ENST00000488828 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
NUP98-212ENST00000488828 CABP2Q9NPB3 220 aa15.56■□□□□ 0.08
NUP98-212ENST00000488828 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
NUP98-212ENST00000488828 ARHGEF28Q8N1W1 1705 aaKnown RBP15.56■□□□□ 0.08
NUP98-212ENST00000488828 EVC2Q86UK5 1308 aa15.55■□□□□ 0.08
NUP98-212ENST00000488828 FMN2Q9NZ56 1722 aa15.54■□□□□ 0.08
NUP98-212ENST00000488828 AHDC1Q5TGY3 1603 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms