RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 CDC42BPGQ6DT37 1551 aa9.52□□□□□ -0.89
PTPRD-212ENST00000488774 DLC1Q96QB1 1528 aa9.51□□□□□ -0.89
PTPRD-212ENST00000488774 ABCC11Q96J66 1382 aa9.51□□□□□ -0.89
PTPRD-212ENST00000488774 SCAF1Q9H7N4 1312 aaKnown RBP9.51□□□□□ -0.89
PTPRD-212ENST00000488774 ADGRB2O60241 1585 aa9.5□□□□□ -0.89
PTPRD-212ENST00000488774 SAFB2Q14151 953 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTPRD-212ENST00000488774 TRAK1Q9UPV9 953 aa9.5□□□□□ -0.89
PTPRD-212ENST00000488774 MSH6P52701 1360 aa9.5□□□□□ -0.89
PTPRD-212ENST00000488774 AHDC1Q5TGY3 1603 aaPredicted RBP9.49□□□□□ -0.89
PTPRD-212ENST00000488774 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
PTPRD-212ENST00000488774 TOPAZ1Q8N9V7 1692 aa9.49□□□□□ -0.89
PTPRD-212ENST00000488774 C1orf167Q5SNV9 1468 aa9.49□□□□□ -0.89
PTPRD-212ENST00000488774 SLAIN2Q9P270 581 aa9.49□□□□□ -0.89
PTPRD-212ENST00000488774 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
PTPRD-212ENST00000488774 NUTM2FA1L443 756 aa9.48□□□□□ -0.89
PTPRD-212ENST00000488774 TOM1O60784 492 aa9.48□□□□□ -0.89
PTPRD-212ENST00000488774 BRINP3Q76B58 766 aa9.48□□□□□ -0.89
PTPRD-212ENST00000488774 PRAM1Q96QH2 718 aa9.48□□□□□ -0.89
PTPRD-212ENST00000488774 ORAI2Q96SN7 254 aa9.48□□□□□ -0.89
PTPRD-212ENST00000488774 C19orf44Q9H6X5 657 aa9.48□□□□□ -0.89
PTPRD-212ENST00000488774 DCCP43146 1447 aa9.48□□□□□ -0.89
PTPRD-212ENST00000488774 MED1Q15648 1581 aaPredicted RBP9.47□□□□□ -0.89
PTPRD-212ENST00000488774 HIRIP3Q9BW71 556 aaPredicted RBP9.47□□□□□ -0.89
PTPRD-212ENST00000488774 SHPRHQ149N8 1683 aa9.47□□□□□ -0.89
PTPRD-212ENST00000488774 TRPM3Q9HCF6 1732 aaPredicted RBP9.47□□□□□ -0.89
PTPRD-212ENST00000488774 TULP4Q9NRJ4 1543 aa9.46□□□□□ -0.89
PTPRD-212ENST00000488774 C14orf37Q86TY3 774 aa9.46□□□□□ -0.9
PTPRD-212ENST00000488774 PRR36Q9H6K5 1346 aa9.46□□□□□ -0.9
PTPRD-212ENST00000488774 LRP6O75581 1613 aa9.45□□□□□ -0.9
PTPRD-212ENST00000488774 ABCA3Q99758 1704 aa9.45□□□□□ -0.9
PTPRD-212ENST00000488774 MINK1Q8N4C8 1332 aaPredicted RBP9.45□□□□□ -0.9
PTPRD-212ENST00000488774 RALGAPBQ86X10 1494 aa9.45□□□□□ -0.9
PTPRD-212ENST00000488774 CRYBG1Q9Y4K1 1723 aa9.45□□□□□ -0.9
PTPRD-212ENST00000488774 PXDNQ92626 1479 aa9.44□□□□□ -0.9
PTPRD-212ENST00000488774 ITSN1Q15811 1721 aa9.44□□□□□ -0.9
PTPRD-212ENST00000488774 MARF1Q9Y4F3 1742 aaKnown RBP9.44□□□□□ -0.9
PTPRD-212ENST00000488774 ALS2Q96Q42 1657 aa9.43□□□□□ -0.9
PTPRD-212ENST00000488774 ATP7BP35670 1465 aa9.43□□□□□ -0.9
PTPRD-212ENST00000488774 GPRASP1Q5JY77 1395 aa9.43□□□□□ -0.9
PTPRD-212ENST00000488774 ATF3P18847 181 aa9.43□□□□□ -0.9
PTPRD-212ENST00000488774 AKAP12Q02952 1782 aa9.42□□□□□ -0.9
PTPRD-212ENST00000488774 KIF1AQ12756 1690 aa9.42□□□□□ -0.9
PTPRD-212ENST00000488774 XPCQ01831 940 aaPredicted RBP9.42□□□□□ -0.9
PTPRD-212ENST00000488774 CADPS2Q86UW7 1296 aa9.42□□□□□ -0.9
PTPRD-212ENST00000488774 SIRT1Q96EB6 747 aa9.42□□□□□ -0.9
PTPRD-212ENST00000488774 TONSLQ96HA7 1378 aa9.41□□□□□ -0.9
PTPRD-212ENST00000488774 COL22A1Q8NFW1 1626 aaPredicted RBP9.41□□□□□ -0.9
PTPRD-212ENST00000488774 ROCK2O75116 1388 aaKnown RBP9.39□□□□□ -0.91
PTPRD-212ENST00000488774 POGKQ9P215 609 aa9.39□□□□□ -0.91
PTPRD-212ENST00000488774 RGS17Q9UGC6 210 aaPredicted RBP9.39□□□□□ -0.91
PTPRD-212ENST00000488774 MYOM1P52179 1685 aa9.39□□□□□ -0.91
PTPRD-212ENST00000488774 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
PTPRD-212ENST00000488774 FOXO3O43524 673 aa9.38□□□□□ -0.91
PTPRD-212ENST00000488774 ESCO1Q5FWF5 840 aa9.38□□□□□ -0.91
PTPRD-212ENST00000488774 PMFBP1Q8TBY8 1022 aa9.38□□□□□ -0.91
PTPRD-212ENST00000488774 STAC3Q96MF2 364 aa9.38□□□□□ -0.91
PTPRD-212ENST00000488774 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
PTPRD-212ENST00000488774 NRKQ7Z2Y5 1582 aa9.37□□□□□ -0.91
PTPRD-212ENST00000488774 SOS2Q07890 1332 aaPredicted RBP9.37□□□□□ -0.91
PTPRD-212ENST00000488774 MON2Q7Z3U7 1717 aa9.37□□□□□ -0.91
PTPRD-212ENST00000488774 ILDR2Q71H61 639 aa9.37□□□□□ -0.91
PTPRD-212ENST00000488774 CCER1Q8TC90 406 aaPredicted RBP9.37□□□□□ -0.91
PTPRD-212ENST00000488774 CDK19Q9BWU1 502 aa9.37□□□□□ -0.91
PTPRD-212ENST00000488774 CENPJQ9HC77 1338 aaPredicted RBP9.36□□□□□ -0.91
PTPRD-212ENST00000488774 PHRF1Q9P1Y6 1649 aaKnown RBP9.36□□□□□ -0.91
PTPRD-212ENST00000488774 CABP2Q9NPB3 220 aa9.36□□□□□ -0.91
PTPRD-212ENST00000488774 RGPD5Q99666 1765 aa9.36□□□□□ -0.91
PTPRD-212ENST00000488774 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
PTPRD-212ENST00000488774 ANKARQ7Z5J8 1434 aa9.35□□□□□ -0.91
PTPRD-212ENST00000488774 TESK2Q96S53 571 aa9.35□□□□□ -0.91
PTPRD-212ENST00000488774 CD163L1Q9NR16 1453 aa9.34□□□□□ -0.91
PTPRD-212ENST00000488774 NUDT16Q96DE0 195 aaKnown RBP9.34□□□□□ -0.91
PTPRD-212ENST00000488774 CARD11Q9BXL7 1154 aa9.34□□□□□ -0.91
PTPRD-212ENST00000488774 PHF8Q9UPP1 1060 aa9.34□□□□□ -0.91
PTPRD-212ENST00000488774 PLCH1Q4KWH8 1693 aa9.34□□□□□ -0.91
PTPRD-212ENST00000488774 JCADQ9P266 1359 aa9.34□□□□□ -0.91
PTPRD-212ENST00000488774 DISP3Q9P2K9 1392 aa9.34□□□□□ -0.91
PTPRD-212ENST00000488774 CLSPNQ9HAW4 1339 aa9.33□□□□□ -0.92
PTPRD-212ENST00000488774 EP400Q96L91 3159 aa9.32□□□□□ -0.92
PTPRD-212ENST00000488774 NRAPQ86VF7 1730 aa9.32□□□□□ -0.92
PTPRD-212ENST00000488774 ST20-MTHFSA0A0A6YYL1 179 aa9.32□□□□□ -0.92
PTPRD-212ENST00000488774 CABLES1Q8TDN4 633 aa9.32□□□□□ -0.92
PTPRD-212ENST00000488774 SPATA31A3Q5VYP0 1347 aa9.31□□□□□ -0.92
PTPRD-212ENST00000488774 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
PTPRD-212ENST00000488774 NUTM2BA6NNL0 878 aaPredicted RBP9.31□□□□□ -0.92
PTPRD-212ENST00000488774 NUTM2EB1AL46 878 aaPredicted RBP9.31□□□□□ -0.92
PTPRD-212ENST00000488774 PLEKHG5O94827 1062 aa9.31□□□□□ -0.92
PTPRD-212ENST00000488774 POTEAQ6S8J7 498 aa9.31□□□□□ -0.92
PTPRD-212ENST00000488774 KRT28Q7Z3Y7 464 aa9.31□□□□□ -0.92
PTPRD-212ENST00000488774 NUTM2AQ8IVF1 878 aaPredicted RBP9.31□□□□□ -0.92
PTPRD-212ENST00000488774 POLR3AO14802 1390 aaPredicted RBP9.31□□□□□ -0.92
PTPRD-212ENST00000488774 USP47Q96K76 1375 aa9.31□□□□□ -0.92
PTPRD-212ENST00000488774 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
PTPRD-212ENST00000488774 ACEP12821 1306 aa9.31□□□□□ -0.92
PTPRD-212ENST00000488774 COL18A1P39060 1754 aa9.3□□□□□ -0.92
PTPRD-212ENST00000488774 BRWD3Q6RI45 1802 aa9.3□□□□□ -0.92
PTPRD-212ENST00000488774 SSH2Q76I76 1423 aa9.3□□□□□ -0.92
PTPRD-212ENST00000488774 NPHP3Q7Z494 1330 aa9.3□□□□□ -0.92
PTPRD-212ENST00000488774 SBNO2Q9Y2G9 1366 aa9.29□□□□□ -0.92
PTPRD-212ENST00000488774 C11orf95C9JLR9 678 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms