RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, human

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LBR-208	ENST00000488632	TMEM132A	Q24JP5	1023 aa		4.2	□□□□□ -1.74
LBR-208	ENST00000488632	MSS51	Q4VC12	460 aa		4.2	□□□□□ -1.74
LBR-208	ENST00000488632	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
LBR-208	ENST00000488632	GPIHBP1	Q8IV16	184 aa		4.2	□□□□□ -1.74
LBR-208	ENST00000488632	AAAS	Q9NRG9	546 aa		4.2	□□□□□ -1.74
LBR-208	ENST00000488632	SLC27A5	Q9Y2P5	690 aa		4.2	□□□□□ -1.74
LBR-208	ENST00000488632	SALL2	Q9Y467	1007 aa	Predicted RBP	4.2	□□□□□ -1.74
LBR-208	ENST00000488632	POTEC	B2RU33	542 aa		4.19	□□□□□ -1.74
LBR-208	ENST00000488632	FOXC1	Q12948	553 aa		4.19	□□□□□ -1.74
LBR-208	ENST00000488632	FAM160A2	Q8N612	972 aa	Predicted RBP	4.19	□□□□□ -1.74
LBR-208	ENST00000488632	TOR4A	Q9NXH8	423 aa		4.19	□□□□□ -1.74
LBR-208	ENST00000488632	AVP	P01185	164 aa		4.18	□□□□□ -1.74
LBR-208	ENST00000488632	BRICD5	Q6PL45	260 aa		4.18	□□□□□ -1.74
LBR-208	ENST00000488632	RNF19B	Q6ZMZ0	732 aa		4.18	□□□□□ -1.74
LBR-208	ENST00000488632	GTF3C3	Q9Y5Q9	886 aa		4.18	□□□□□ -1.74
LBR-208	ENST00000488632	SMARCA4	P51532	1647 aa		4.17	□□□□□ -1.74
LBR-208	ENST00000488632	CD2BP2	O95400	341 aa	Known RBP	4.17	□□□□□ -1.74
LBR-208	ENST00000488632	GRIPAP1	Q4V328	841 aa		4.17	□□□□□ -1.74
LBR-208	ENST00000488632	CYP4X1	Q8N118	509 aa		4.17	□□□□□ -1.74
LBR-208	ENST00000488632	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.16	□□□□□ -1.74
LBR-208	ENST00000488632	CD46	P15529	392 aa		4.16	□□□□□ -1.74
LBR-208	ENST00000488632	SMCP	P49901	116 aa	Predicted RBP	4.16	□□□□□ -1.74
LBR-208	ENST00000488632	MMP16	P51512	607 aa		4.16	□□□□□ -1.74
LBR-208	ENST00000488632	MAP2K5	Q13163	448 aa		4.16	□□□□□ -1.74
LBR-208	ENST00000488632	CTC1	Q2NKJ3	1217 aa		4.16	□□□□□ -1.74
LBR-208	ENST00000488632		Q3C1V9	767 aa		4.16	□□□□□ -1.74
LBR-208	ENST00000488632	WNT7A	O00755	349 aa		4.15	□□□□□ -1.75
LBR-208	ENST00000488632	AXIN1	O15169	862 aa		4.15	□□□□□ -1.75
LBR-208	ENST00000488632	DXO	O77932	396 aa	Known RBP	4.15	□□□□□ -1.75
LBR-208	ENST00000488632	TRIM32	Q13049	653 aa		4.15	□□□□□ -1.75
LBR-208	ENST00000488632	LCE2A	Q5TA79	106 aa	Predicted RBP	4.15	□□□□□ -1.75
LBR-208	ENST00000488632	ZBTB24	O43167	697 aa	Predicted RBP	4.14	□□□□□ -1.75
LBR-208	ENST00000488632	KDM4A	O75164	1064 aa		4.14	□□□□□ -1.75
LBR-208	ENST00000488632	TREML4	Q6UXN2	200 aa		4.14	□□□□□ -1.75
LBR-208	ENST00000488632	GMPR2	Q9P2T1	348 aa	Known RBP	4.14	□□□□□ -1.75
LBR-208	ENST00000488632	DACH1	Q9UI36	760 aa		4.14	□□□□□ -1.75
LBR-208	ENST00000488632	WIZ	O95785	1651 aa		4.13	□□□□□ -1.75
LBR-208	ENST00000488632	TTC24	A2A3L6	582 aa	Predicted RBP	4.13	□□□□□ -1.75
LBR-208	ENST00000488632	HOXA2	O43364	376 aa		4.13	□□□□□ -1.75
LBR-208	ENST00000488632	USP46	P62068	366 aa		4.13	□□□□□ -1.75
LBR-208	ENST00000488632	SNIP1	Q8TAD8	396 aa	Known RBP	4.13	□□□□□ -1.75
LBR-208	ENST00000488632	ZC3H15	Q8WU90	426 aa	Known RBP	4.13	□□□□□ -1.75
LBR-208	ENST00000488632	USB1	Q9BQ65	265 aa	Known RBP	4.13	□□□□□ -1.75
LBR-208	ENST00000488632	REPIN1	Q9BWE0	567 aa	Known RBP	4.13	□□□□□ -1.75
LBR-208	ENST00000488632	SMPD1	P17405	629 aa		4.12	□□□□□ -1.75
LBR-208	ENST00000488632	MDM2	Q00987	491 aa	Predicted RBP	4.12	□□□□□ -1.75
LBR-208	ENST00000488632	HLA-C	Q95604	372 aa		4.12	□□□□□ -1.75
LBR-208	ENST00000488632	CCDC102A	Q96A19	550 aa		4.12	□□□□□ -1.75
LBR-208	ENST00000488632	MRGPRX2	Q96LB1	330 aa		4.12	□□□□□ -1.75
LBR-208	ENST00000488632	PRDM2	Q13029	1718 aa		4.12	□□□□□ -1.75
LBR-208	ENST00000488632	EIF4G1	Q04637	1599 aa	Known RBP	4.11	□□□□□ -1.75
LBR-208	ENST00000488632	MROH2B	Q7Z745	1585 aa		4.11	□□□□□ -1.75
LBR-208	ENST00000488632	C11orf95	C9JLR9	678 aa	Predicted RBP	4.11	□□□□□ -1.75
LBR-208	ENST00000488632	IRF6	O14896	467 aa		4.11	□□□□□ -1.75
LBR-208	ENST00000488632	WNT7B	P56706	349 aa		4.11	□□□□□ -1.75
LBR-208	ENST00000488632	CECR2	Q9BXF3	1484 aa		4.11	□□□□□ -1.75
LBR-208	ENST00000488632	SMARCA2	P51531	1590 aa		4.1	□□□□□ -1.75
LBR-208	ENST00000488632	PEG3	Q9GZU2	1588 aa		4.1	□□□□□ -1.75
LBR-208	ENST00000488632	JUND	P17535	347 aa		4.1	□□□□□ -1.75
LBR-208	ENST00000488632	BRPF1	P55201	1214 aa	Predicted RBP	4.1	□□□□□ -1.75
LBR-208	ENST00000488632	GPCPD1	Q9NPB8	672 aa		4.1	□□□□□ -1.75
LBR-208	ENST00000488632	ATP13A2	Q9NQ11	1180 aa		4.1	□□□□□ -1.75
LBR-208	ENST00000488632	TIMELESS	Q9UNS1	1208 aa		4.1	□□□□□ -1.75
LBR-208	ENST00000488632	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.1	□□□□□ -1.75
LBR-208	ENST00000488632		J3QL48	77 aa		4.09	□□□□□ -1.75
LBR-208	ENST00000488632	ZMYND10	O75800	440 aa		4.09	□□□□□ -1.75
LBR-208	ENST00000488632	WFS1	O76024	890 aa		4.09	□□□□□ -1.75
LBR-208	ENST00000488632	CLCN1	P35523	988 aa		4.09	□□□□□ -1.75
LBR-208	ENST00000488632	SKOR1	P84550	965 aa		4.09	□□□□□ -1.75
LBR-208	ENST00000488632	GUCA2A	Q02747	115 aa		4.09	□□□□□ -1.75
LBR-208	ENST00000488632	NFX1	Q12986	1120 aa	Known RBP	4.09	□□□□□ -1.75
LBR-208	ENST00000488632	CCDC24	Q8N4L8	307 aa		4.09	□□□□□ -1.75
LBR-208	ENST00000488632	TRIM47	Q96LD4	638 aa		4.09	□□□□□ -1.75
LBR-208	ENST00000488632	FAM217B	Q9NTX9	383 aa	Predicted RBP	4.09	□□□□□ -1.75
LBR-208	ENST00000488632	TOP2A	P11388	1531 aa	Known RBP	4.09	□□□□□ -1.75
LBR-208	ENST00000488632	WIPF1	O43516	503 aa		4.08	□□□□□ -1.76
LBR-208	ENST00000488632	NEUROD2	Q15784	382 aa		4.08	□□□□□ -1.76
LBR-208	ENST00000488632	RC3H1	Q5TC82	1133 aa	Known RBP	4.08	□□□□□ -1.76
LBR-208	ENST00000488632	RETREG3	Q86VR2	466 aa		4.08	□□□□□ -1.76
LBR-208	ENST00000488632	HPS1	Q92902	700 aa		4.08	□□□□□ -1.76
LBR-208	ENST00000488632	RSF1	Q96T23	1441 aa	Predicted RBP	4.08	□□□□□ -1.76
LBR-208	ENST00000488632	SLC24A3	Q9HC58	644 aa		4.08	□□□□□ -1.76
LBR-208	ENST00000488632	SENP2	Q9HC62	589 aa		4.08	□□□□□ -1.76
LBR-208	ENST00000488632	CC2D2A	Q9P2K1	1620 aa		4.07	□□□□□ -1.76
LBR-208	ENST00000488632	HMGXB3	Q12766	1538 aa		4.07	□□□□□ -1.76
LBR-208	ENST00000488632	SNRPB	P14678	240 aa	Known RBP	4.07	□□□□□ -1.76
LBR-208	ENST00000488632	BARGIN	Q6ZT62	677 aa		4.07	□□□□□ -1.76
LBR-208	ENST00000488632	KIFC2	Q96AC6	838 aa		4.07	□□□□□ -1.76
LBR-208	ENST00000488632	NUDT12	Q9BQG2	462 aa		4.07	□□□□□ -1.76
LBR-208	ENST00000488632	SUPT5H	O00267	1087 aa	Known RBP	4.06	□□□□□ -1.76
LBR-208	ENST00000488632	LCE2C	Q5TA81	110 aa		4.06	□□□□□ -1.76
LBR-208	ENST00000488632	C14orf37	Q86TY3	774 aa		4.06	□□□□□ -1.76
LBR-208	ENST00000488632	NUTM1	Q86Y26	1132 aa		4.06	□□□□□ -1.76
LBR-208	ENST00000488632	SYMPK	Q92797	1274 aa	Known RBP	4.06	□□□□□ -1.76
LBR-208	ENST00000488632	AK7	Q96M32	723 aa		4.06	□□□□□ -1.76
LBR-208	ENST00000488632	TERT	O14746	1132 aa	Known RBP	4.05	□□□□□ -1.76
LBR-208	ENST00000488632	ALDH1A1	P00352	501 aa		4.05	□□□□□ -1.76
LBR-208	ENST00000488632	CCNYL3	P0C7X3	344 aa		4.05	□□□□□ -1.76
LBR-208	ENST00000488632	FDX1	P10109	184 aa		4.05	□□□□□ -1.76
LBR-208	ENST00000488632	INSM1	Q01101	510 aa	Predicted RBP	4.05	□□□□□ -1.76

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