RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SPIRE2Q8WWL2 714 aa9.41□□□□□ -0.9
ITGB1-214ENST00000488427 TBC1D2Q9BYX2 928 aa9.41□□□□□ -0.9
ITGB1-214ENST00000488427 HOXA2O43364 376 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 DGAT1O75907 488 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 PRR20EP86478 221 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 PRR20CP86479 221 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 PRR20DP86480 221 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 PRR20BP86481 221 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 PRR20AP86496 221 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 FAM117AQ9C073 453 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 GOPCQ9HD26 462 aa9.4□□□□□ -0.9
ITGB1-214ENST00000488427 ATP1B4Q9UN42 357 aaPredicted RBP9.4□□□□□ -0.9
ITGB1-214ENST00000488427 SH3D19Q5HYK7 790 aa9.39□□□□□ -0.91
ITGB1-214ENST00000488427 ZNF697Q5TEC3 545 aa9.39□□□□□ -0.91
ITGB1-214ENST00000488427 LIAT1Q6ZQX7 453 aa9.38□□□□□ -0.91
ITGB1-214ENST00000488427 SLC6A16Q9GZN6 736 aa9.38□□□□□ -0.91
ITGB1-214ENST00000488427 FDX1P10109 184 aa9.37□□□□□ -0.91
ITGB1-214ENST00000488427 MORN1Q5T089 497 aa9.37□□□□□ -0.91
ITGB1-214ENST00000488427 IL27Q8NEV9 243 aa9.37□□□□□ -0.91
ITGB1-214ENST00000488427 ZNF775Q96BV0 537 aaPredicted RBP9.37□□□□□ -0.91
ITGB1-214ENST00000488427 PCMTD1Q96MG8 357 aaPredicted RBP9.37□□□□□ -0.91
ITGB1-214ENST00000488427 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
ITGB1-214ENST00000488427 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
ITGB1-214ENST00000488427 FMNL1O95466 1100 aaPredicted RBP9.36□□□□□ -0.91
ITGB1-214ENST00000488427 CLK2P49760 499 aaKnown RBP9.36□□□□□ -0.91
ITGB1-214ENST00000488427 MYT1Q01538 1121 aa9.36□□□□□ -0.91
ITGB1-214ENST00000488427 SKIV2LQ15477 1246 aaKnown RBP9.36□□□□□ -0.91
ITGB1-214ENST00000488427 TUSC1Q2TAM9 212 aa9.36□□□□□ -0.91
ITGB1-214ENST00000488427 FAM187AA6NFU0 413 aa9.35□□□□□ -0.91
ITGB1-214ENST00000488427 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
ITGB1-214ENST00000488427 RIC3Q7Z5B4 369 aa9.35□□□□□ -0.91
ITGB1-214ENST00000488427 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
ITGB1-214ENST00000488427 TNFRSF10AO00220 468 aa9.34□□□□□ -0.91
ITGB1-214ENST00000488427 SPTLC1O15269 473 aa9.34□□□□□ -0.91
ITGB1-214ENST00000488427 PRPF38BQ5VTL8 546 aaKnown RBP9.34□□□□□ -0.91
ITGB1-214ENST00000488427 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
ITGB1-214ENST00000488427 MOXD2PA6NHM9 499 aa9.33□□□□□ -0.92
ITGB1-214ENST00000488427 GDF9O60383 454 aa9.33□□□□□ -0.92
ITGB1-214ENST00000488427 TMEM132AQ24JP5 1023 aa9.33□□□□□ -0.92
ITGB1-214ENST00000488427 PUS10Q3MIT2 529 aaKnown RBP9.33□□□□□ -0.92
ITGB1-214ENST00000488427 ZBTB3Q9H5J0 574 aa9.33□□□□□ -0.92
ITGB1-214ENST00000488427 PLEKHG3A1L390 1219 aa9.32□□□□□ -0.92
ITGB1-214ENST00000488427 SPSB2Q99619 263 aa9.32□□□□□ -0.92
ITGB1-214ENST00000488427 SLC27A5Q9Y2P5 690 aa9.32□□□□□ -0.92
ITGB1-214ENST00000488427 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
ITGB1-214ENST00000488427 MTMR2Q13614 643 aa9.31□□□□□ -0.92
ITGB1-214ENST00000488427 PLA2G2CQ5R387 149 aa9.31□□□□□ -0.92
ITGB1-214ENST00000488427 NUTM2BA6NNL0 878 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-214ENST00000488427 NUTM2EB1AL46 878 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-214ENST00000488427 NUTM2DQ5VT03 806 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-214ENST00000488427 NUTM2AQ8IVF1 878 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-214ENST00000488427 POLR3EQ9NVU0 708 aa9.3□□□□□ -0.92
ITGB1-214ENST00000488427 RETREG3Q86VR2 466 aa9.29□□□□□ -0.92
ITGB1-214ENST00000488427 USB1Q9BQ65 265 aaKnown RBP9.29□□□□□ -0.92
ITGB1-214ENST00000488427 NDUFV2P19404 249 aa9.28□□□□□ -0.92
ITGB1-214ENST00000488427 BRICD5Q6PL45 260 aa9.28□□□□□ -0.92
ITGB1-214ENST00000488427 FOXC1Q12948 553 aa9.27□□□□□ -0.93
ITGB1-214ENST00000488427 MSS51Q4VC12 460 aa9.27□□□□□ -0.93
ITGB1-214ENST00000488427 POTECB2RU33 542 aa9.26□□□□□ -0.93
ITGB1-214ENST00000488427 HELBQ8NG08 1087 aaPredicted RBP9.26□□□□□ -0.93
ITGB1-214ENST00000488427 RPIAP49247 311 aa9.25□□□□□ -0.93
ITGB1-214ENST00000488427 CSPP1Q1MSJ5 1256 aa9.25□□□□□ -0.93
ITGB1-214ENST00000488427 LIMD1Q9UGP4 676 aa9.25□□□□□ -0.93
ITGB1-214ENST00000488427 ST8SIA5O15466 376 aa9.24□□□□□ -0.93
ITGB1-214ENST00000488427 GUCA2AQ02747 115 aa9.24□□□□□ -0.93
ITGB1-214ENST00000488427 THAP11Q96EK4 314 aa9.24□□□□□ -0.93
ITGB1-214ENST00000488427 AAASQ9NRG9 546 aa9.24□□□□□ -0.93
ITGB1-214ENST00000488427 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
ITGB1-214ENST00000488427 FCF1Q9Y324 198 aaKnown RBP9.24□□□□□ -0.93
ITGB1-214ENST00000488427 CD2BP2O95400 341 aaKnown RBP9.23□□□□□ -0.93
ITGB1-214ENST00000488427 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
ITGB1-214ENST00000488427 HLA-CQ95604 372 aa9.23□□□□□ -0.93
ITGB1-214ENST00000488427 PCDHGC3Q9UN70 934 aa9.23□□□□□ -0.93
ITGB1-214ENST00000488427 LILRB3O75022 631 aa9.22□□□□□ -0.93
ITGB1-214ENST00000488427 HRCP23327 699 aa9.22□□□□□ -0.93
ITGB1-214ENST00000488427 RNF19BQ6ZMZ0 732 aa9.22□□□□□ -0.93
ITGB1-214ENST00000488427 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.22□□□□□ -0.93
ITGB1-214ENST00000488427 APBB1O00213 710 aa9.21□□□□□ -0.94
ITGB1-214ENST00000488427 TMEM259Q4ZIN3 620 aa9.21□□□□□ -0.94
ITGB1-214ENST00000488427 PPP2R2DQ66LE6 453 aa9.21□□□□□ -0.94
ITGB1-214ENST00000488427 PRR7Q8TB68 274 aa9.21□□□□□ -0.94
ITGB1-214ENST00000488427 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
ITGB1-214ENST00000488427 JUNDP17535 347 aa9.2□□□□□ -0.94
ITGB1-214ENST00000488427 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
ITGB1-214ENST00000488427 ZBTB24O43167 697 aaPredicted RBP9.18□□□□□ -0.94
ITGB1-214ENST00000488427 MMP16P51512 607 aa9.18□□□□□ -0.94
ITGB1-214ENST00000488427 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
ITGB1-214ENST00000488427 FAM160A2Q8N612 972 aaPredicted RBP9.18□□□□□ -0.94
ITGB1-214ENST00000488427 PROCA1Q8NCQ7 364 aaPredicted RBP9.18□□□□□ -0.94
ITGB1-214ENST00000488427 CABLES1Q8TDN4 633 aa9.18□□□□□ -0.94
ITGB1-214ENST00000488427 TSC1Q92574 1164 aa9.18□□□□□ -0.94
ITGB1-214ENST00000488427 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
ITGB1-214ENST00000488427 DXOO77932 396 aaKnown RBP9.17□□□□□ -0.94
ITGB1-214ENST00000488427 QPCTQ16769 361 aa9.17□□□□□ -0.94
ITGB1-214ENST00000488427 PTPRNQ16849 979 aa9.17□□□□□ -0.94
ITGB1-214ENST00000488427 PNMA1Q8ND90 353 aa9.17□□□□□ -0.94
ITGB1-214ENST00000488427 AXIN1O15169 862 aa9.16□□□□□ -0.94
ITGB1-214ENST00000488427 AVPP01185 164 aa9.16□□□□□ -0.94
ITGB1-214ENST00000488427 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
ITGB1-214ENST00000488427 PRDM9Q9NQV7 894 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms