RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 GZF1Q9H116 711 aaPredicted RBP7.9□□□□□ -1.14
SIK3-212ENST00000488337 WDR62O43379 1518 aa7.9□□□□□ -1.14
SIK3-212ENST00000488337 SEMA3FQ13275 785 aa7.9□□□□□ -1.14
SIK3-212ENST00000488337 JARID2Q92833 1246 aaPredicted RBP7.9□□□□□ -1.14
SIK3-212ENST00000488337 PRIMPOLQ96LW4 560 aa7.9□□□□□ -1.14
SIK3-212ENST00000488337 FAM53CQ9NYF3 392 aa7.9□□□□□ -1.14
SIK3-212ENST00000488337 DHX29Q7Z478 1369 aaKnown RBP7.9□□□□□ -1.14
SIK3-212ENST00000488337 CCDC66A2RUB6 948 aa7.9□□□□□ -1.15
SIK3-212ENST00000488337 BANK1Q8NDB2 785 aa7.9□□□□□ -1.15
SIK3-212ENST00000488337 MYCBPQ99417 103 aaPredicted RBP7.89□□□□□ -1.15
SIK3-212ENST00000488337 CCDC189A1A4V9 331 aa7.89□□□□□ -1.15
SIK3-212ENST00000488337 LMOD3Q0VAK6 560 aa7.89□□□□□ -1.15
SIK3-212ENST00000488337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.89□□□□□ -1.15
SIK3-212ENST00000488337 CCDC172P0C7W6 258 aa7.89□□□□□ -1.15
SIK3-212ENST00000488337 TSGA10IPQ3SY00 556 aa7.89□□□□□ -1.15
SIK3-212ENST00000488337 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
SIK3-212ENST00000488337 KIF7Q2M1P5 1343 aa7.89□□□□□ -1.15
SIK3-212ENST00000488337 OGFRQ9NZT2 677 aa7.89□□□□□ -1.15
SIK3-212ENST00000488337 NPC1L1Q9UHC9 1359 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 TERF2Q15554 542 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 CYB5RLQ6IPT4 315 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 RNF217Q8TC41 542 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 PUS7Q96PZ0 661 aaKnown RBP7.88□□□□□ -1.15
SIK3-212ENST00000488337 SMC4Q9NTJ3 1288 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 DDX11L8A8MPP1 907 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 SETQ01105 290 aaPredicted RBP7.88□□□□□ -1.15
SIK3-212ENST00000488337 CENPQQ7L2Z9 268 aaPredicted RBP7.88□□□□□ -1.15
SIK3-212ENST00000488337 TBC1D2Q9BYX2 928 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 IFT140Q96RY7 1462 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 RAD54L2Q9Y4B4 1467 aa7.88□□□□□ -1.15
SIK3-212ENST00000488337 EFCAB5A4FU69 1503 aa7.87□□□□□ -1.15
SIK3-212ENST00000488337 TDRD9Q8NDG6 1382 aaKnown RBP7.87□□□□□ -1.15
SIK3-212ENST00000488337 NBPF10Q6P3W6 841 aaKnown RBP7.87□□□□□ -1.15
SIK3-212ENST00000488337 AQRO60306 1485 aaKnown RBP eCLIP7.87□□□□□ -1.15
SIK3-212ENST00000488337 ZMYM3Q14202 1370 aa7.87□□□□□ -1.15
SIK3-212ENST00000488337 SLKQ9H2G2 1235 aaPredicted RBP7.87□□□□□ -1.15
SIK3-212ENST00000488337 CUL7Q14999 1698 aa7.87□□□□□ -1.15
SIK3-212ENST00000488337 CTIFO43310 598 aaKnown RBP7.87□□□□□ -1.15
SIK3-212ENST00000488337 DHX16O60231 1041 aaKnown RBP7.87□□□□□ -1.15
SIK3-212ENST00000488337 MAP2K1Q02750 393 aaPredicted RBP7.87□□□□□ -1.15
SIK3-212ENST00000488337 SGSM3Q96HU1 749 aa7.87□□□□□ -1.15
SIK3-212ENST00000488337 DONSONQ9NYP3 566 aa7.87□□□□□ -1.15
SIK3-212ENST00000488337 NBPF8Q3BBV2 869 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 ZNF771Q7L3S4 317 aaPredicted RBP7.86□□□□□ -1.15
SIK3-212ENST00000488337 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 CALCOCO1Q9P1Z2 691 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 SHROOM2Q13796 1616 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 GUCY2CP25092 1073 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 NASPP49321 788 aaPredicted RBP7.86□□□□□ -1.15
SIK3-212ENST00000488337 TPRNQ4KMQ1 711 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 NFATC2IPQ8NCF5 419 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
SIK3-212ENST00000488337 RCAN3Q9UKA8 241 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 SPATA31E1Q6ZUB1 1445 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 ZMYM4Q5VZL5 1548 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 TTC36A6NLP5 189 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 SPDYE4A6NLX3 237 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 BCL2L12Q9HB09 334 aa7.86□□□□□ -1.15
SIK3-212ENST00000488337 MORC2Q9Y6X9 1032 aaPredicted RBP7.86□□□□□ -1.15
SIK3-212ENST00000488337 SEC24BO95487 1268 aa7.85□□□□□ -1.15
SIK3-212ENST00000488337 PRDM16Q9HAZ2 1276 aa7.85□□□□□ -1.15
SIK3-212ENST00000488337 BSDC1Q9NW68 430 aaPredicted RBP7.85□□□□□ -1.15
SIK3-212ENST00000488337 HMGB1P09429 215 aaKnown RBP7.85□□□□□ -1.15
SIK3-212ENST00000488337 THOC2Q8NI27 1593 aaKnown RBP7.85□□□□□ -1.15
SIK3-212ENST00000488337 TSC1Q92574 1164 aa7.85□□□□□ -1.15
SIK3-212ENST00000488337 KDM2AQ9Y2K7 1162 aa7.85□□□□□ -1.15
SIK3-212ENST00000488337 ATXN8OSP0DMR3 200 aa7.85□□□□□ -1.15
SIK3-212ENST00000488337 CREBRFQ8IUR6 639 aa7.85□□□□□ -1.15
SIK3-212ENST00000488337 CARD11Q9BXL7 1154 aa7.85□□□□□ -1.15
SIK3-212ENST00000488337 STK26Q9P289 416 aa7.85□□□□□ -1.15
SIK3-212ENST00000488337 PTPN23Q9H3S7 1636 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 U2AF2P26368 475 aaKnown RBP eCLIP7.84□□□□□ -1.151e-6■■■□□ 15.3
SIK3-212ENST00000488337 GSCP56915 257 aaPredicted RBP7.84□□□□□ -1.15
SIK3-212ENST00000488337 C11orf91Q3C1V1 193 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 C20orf194Q5TEA3 1177 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 ICE2Q659A1 982 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 CLEC17AQ6ZS10 378 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 CHMP5Q9NZZ3 219 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 TARBP1Q13395 1621 aaKnown RBP7.84□□□□□ -1.15
SIK3-212ENST00000488337 CTR9Q6PD62 1173 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 TBC1D32Q96NH3 1257 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 ATG3Q9NT62 314 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 CTNNA3Q9UI47 895 aa7.84□□□□□ -1.15
SIK3-212ENST00000488337 DDX41Q9UJV9 622 aaKnown RBP7.84□□□□□ -1.15
SIK3-212ENST00000488337 ZNF445P59923 1031 aa7.83□□□□□ -1.16
SIK3-212ENST00000488337 PDCL2Q8N4E4 241 aa7.83□□□□□ -1.16
SIK3-212ENST00000488337 STAG3Q9UJ98 1225 aa7.83□□□□□ -1.16
SIK3-212ENST00000488337 TMEM132AQ24JP5 1023 aa7.83□□□□□ -1.16
SIK3-212ENST00000488337 SLC4A2P04920 1241 aa7.83□□□□□ -1.16
SIK3-212ENST00000488337 MED4Q9NPJ6 270 aa7.83□□□□□ -1.16
SIK3-212ENST00000488337 CFAP43Q8NDM7 1665 aa7.83□□□□□ -1.16
SIK3-212ENST00000488337 KIF1CO43896 1103 aaKnown RBP7.83□□□□□ -1.16
SIK3-212ENST00000488337 RAD51AP2Q09MP3 1159 aa7.83□□□□□ -1.16
SIK3-212ENST00000488337 CFDP1Q9UEE9 299 aaPredicted RBP7.83□□□□□ -1.16
SIK3-212ENST00000488337 SPTLC3Q9NUV7 552 aa7.82□□□□□ -1.16
SIK3-212ENST00000488337 ROCK2O75116 1388 aaKnown RBP7.82□□□□□ -1.16
SIK3-212ENST00000488337 GAPVD1Q14C86 1478 aa7.82□□□□□ -1.16
SIK3-212ENST00000488337 SKOR2Q2VWA4 1001 aaPredicted RBP7.82□□□□□ -1.16
SIK3-212ENST00000488337 CRBNQ96SW2 442 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms