RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 BCL9LQ86UU0 1499 aa17.43■□□□□ 0.38
HLA-DOB-209ENST00000488325 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
HLA-DOB-209ENST00000488325 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
HLA-DOB-209ENST00000488325 XRN1Q8IZH2 1706 aaKnown RBP17.41■□□□□ 0.38
HLA-DOB-209ENST00000488325 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
HLA-DOB-209ENST00000488325 YY1P25490 414 aa17.4■□□□□ 0.38
HLA-DOB-209ENST00000488325 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
HLA-DOB-209ENST00000488325 LAMC1P11047 1609 aa17.39■□□□□ 0.38
HLA-DOB-209ENST00000488325 ADGRL3Q9HAR2 1447 aa17.39■□□□□ 0.38
HLA-DOB-209ENST00000488325 C1orf167Q5SNV9 1468 aa17.37■□□□□ 0.37
HLA-DOB-209ENST00000488325 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
HLA-DOB-209ENST00000488325 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
HLA-DOB-209ENST00000488325 NEUROD1Q13562 356 aa17.36■□□□□ 0.37
HLA-DOB-209ENST00000488325 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
HLA-DOB-209ENST00000488325 MYOM2P54296 1465 aa17.36■□□□□ 0.37
HLA-DOB-209ENST00000488325 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
HLA-DOB-209ENST00000488325 NALCNQ8IZF0 1738 aa17.35■□□□□ 0.37
HLA-DOB-209ENST00000488325 GLI3P10071 1580 aa17.34■□□□□ 0.37
HLA-DOB-209ENST00000488325 RALGAPBQ86X10 1494 aa17.34■□□□□ 0.37
HLA-DOB-209ENST00000488325 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
HLA-DOB-209ENST00000488325 BRWD3Q6RI45 1802 aa17.33■□□□□ 0.37
HLA-DOB-209ENST00000488325 SPHKAPQ2M3C7 1700 aa17.33■□□□□ 0.37
HLA-DOB-209ENST00000488325 ORAI2Q96SN7 254 aa17.33■□□□□ 0.36
HLA-DOB-209ENST00000488325 NRXN3Q9Y4C0 1643 aa17.32■□□□□ 0.36
HLA-DOB-209ENST00000488325 MARF1Q9Y4F3 1742 aaKnown RBP17.31■□□□□ 0.36
HLA-DOB-209ENST00000488325 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.3■□□□□ 0.36
HLA-DOB-209ENST00000488325 METP08581 1390 aa17.3■□□□□ 0.36
HLA-DOB-209ENST00000488325 BAG6P46379 1132 aa17.29■□□□□ 0.36
HLA-DOB-209ENST00000488325 UNC5CLQ8IV45 518 aa17.29■□□□□ 0.36
HLA-DOB-209ENST00000488325 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
HLA-DOB-209ENST00000488325 R3HDM1Q15032 1099 aaKnown RBP17.27■□□□□ 0.36
HLA-DOB-209ENST00000488325 IFFO2Q5TF58 517 aa17.27■□□□□ 0.36
HLA-DOB-209ENST00000488325 SLIT2O94813 1529 aa17.26■□□□□ 0.35
HLA-DOB-209ENST00000488325 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
HLA-DOB-209ENST00000488325 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.35
HLA-DOB-209ENST00000488325 E9PCH4 1651 aa17.21■□□□□ 0.35
HLA-DOB-209ENST00000488325 PXDNQ92626 1479 aa17.21■□□□□ 0.35
HLA-DOB-209ENST00000488325 EN1Q05925 392 aaPredicted RBP17.21■□□□□ 0.35
HLA-DOB-209ENST00000488325 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
HLA-DOB-209ENST00000488325 ONECUT3O60422 494 aaPredicted RBP17.19■□□□□ 0.34
HLA-DOB-209ENST00000488325 XPCQ01831 940 aaPredicted RBP17.19■□□□□ 0.34
HLA-DOB-209ENST00000488325 VPS72Q15906 364 aa17.17■□□□□ 0.34
HLA-DOB-209ENST00000488325 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
HLA-DOB-209ENST00000488325 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
HLA-DOB-209ENST00000488325 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
HLA-DOB-209ENST00000488325 FOXO3O43524 673 aa17.15■□□□□ 0.34
HLA-DOB-209ENST00000488325 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
HLA-DOB-209ENST00000488325 ZNF326Q5BKZ1 582 aaKnown RBP17.14■□□□□ 0.33
HLA-DOB-209ENST00000488325 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
HLA-DOB-209ENST00000488325 SENP3-EIF4A1A0A087X0R7 540 aa17.13■□□□□ 0.33
HLA-DOB-209ENST00000488325 A0A0G2JS52 829 aa17.13■□□□□ 0.33
HLA-DOB-209ENST00000488325 MYT1Q01538 1121 aa17.13■□□□□ 0.33
HLA-DOB-209ENST00000488325 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
HLA-DOB-209ENST00000488325 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
HLA-DOB-209ENST00000488325 DISP2A7MBM2 1401 aa17.12■□□□□ 0.33
HLA-DOB-209ENST00000488325 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
HLA-DOB-209ENST00000488325 EZH2Q15910 746 aaKnown RBP17.1■□□□□ 0.33
HLA-DOB-209ENST00000488325 LRPPRCP42704 1394 aaKnown RBP17.1■□□□□ 0.33
HLA-DOB-209ENST00000488325 SPATA31A3Q5VYP0 1347 aa17.09■□□□□ 0.33
HLA-DOB-209ENST00000488325 NWD2Q9ULI1 1742 aa17.08■□□□□ 0.32
HLA-DOB-209ENST00000488325 PLCH1Q4KWH8 1693 aa17.08■□□□□ 0.32
HLA-DOB-209ENST00000488325 FAM182BQ5T319 152 aa17.08■□□□□ 0.32
HLA-DOB-209ENST00000488325 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
HLA-DOB-209ENST00000488325 FAM98CQ17RN3 349 aaKnown RBP17.07■□□□□ 0.32
HLA-DOB-209ENST00000488325 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
HLA-DOB-209ENST00000488325 TNS1Q9HBL0 1735 aaKnown RBP17.07■□□□□ 0.32
HLA-DOB-209ENST00000488325 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
HLA-DOB-209ENST00000488325 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
HLA-DOB-209ENST00000488325 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
HLA-DOB-209ENST00000488325 PPP1R1BQ9UD71 204 aaPredicted RBP17.06■□□□□ 0.32
HLA-DOB-209ENST00000488325 CAMKK2Q96RR4 588 aa17.05■□□□□ 0.32
HLA-DOB-209ENST00000488325 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
HLA-DOB-209ENST00000488325 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
HLA-DOB-209ENST00000488325 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
HLA-DOB-209ENST00000488325 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
HLA-DOB-209ENST00000488325 SPATA31E1Q6ZUB1 1445 aa17.03■□□□□ 0.32
HLA-DOB-209ENST00000488325 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
HLA-DOB-209ENST00000488325 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
HLA-DOB-209ENST00000488325 ADGRB2O60241 1585 aa17.02■□□□□ 0.31
HLA-DOB-209ENST00000488325 CAMTA1Q9Y6Y1 1673 aa17.01■□□□□ 0.31
HLA-DOB-209ENST00000488325 C1QTNF8P60827 252 aa17.01■□□□□ 0.31
HLA-DOB-209ENST00000488325 SPON1Q9HCB6 807 aa17.01■□□□□ 0.31
HLA-DOB-209ENST00000488325 RGL3Q3MIN7 710 aa17■□□□□ 0.31
HLA-DOB-209ENST00000488325 DCAF11Q8TEB1 546 aa17■□□□□ 0.31
HLA-DOB-209ENST00000488325 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
HLA-DOB-209ENST00000488325 KRT28Q7Z3Y7 464 aa16.99■□□□□ 0.31
HLA-DOB-209ENST00000488325 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
HLA-DOB-209ENST00000488325 KIF1BO60333 1816 aa16.98■□□□□ 0.31
HLA-DOB-209ENST00000488325 TNS3Q68CZ2 1445 aa16.98■□□□□ 0.31
HLA-DOB-209ENST00000488325 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
HLA-DOB-209ENST00000488325 TRIM37O94972 964 aa16.98■□□□□ 0.31
HLA-DOB-209ENST00000488325 NRAPQ86VF7 1730 aa16.98■□□□□ 0.31
HLA-DOB-209ENST00000488325 KCNQ2O43526 872 aa16.97■□□□□ 0.31
HLA-DOB-209ENST00000488325 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
HLA-DOB-209ENST00000488325 ABCA3Q99758 1704 aa16.96■□□□□ 0.31
HLA-DOB-209ENST00000488325 APBA3O96018 575 aa16.96■□□□□ 0.31
HLA-DOB-209ENST00000488325 KIF1AQ12756 1690 aa16.96■□□□□ 0.31
HLA-DOB-209ENST00000488325 RREB1Q92766 1687 aa16.95■□□□□ 0.3
HLA-DOB-209ENST00000488325 NBPF14Q5TI25 921 aa16.95■□□□□ 0.3
HLA-DOB-209ENST00000488325 NUP188Q5SRE5 1749 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms