RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 GGCXP38435 758 aa10.89□□□□□ -0.67
VPS8-224ENST00000488255 IL27Q8NEV9 243 aa10.89□□□□□ -0.67
VPS8-224ENST00000488255 POLR3EQ9NVU0 708 aa10.89□□□□□ -0.67
VPS8-224ENST00000488255 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
VPS8-224ENST00000488255 RIC3Q7Z5B4 369 aa10.88□□□□□ -0.67
VPS8-224ENST00000488255 DDRGK1Q96HY6 314 aa10.88□□□□□ -0.67
VPS8-224ENST00000488255 RSBN1LQ6PCB5 846 aaPredicted RBP10.87□□□□□ -0.67
VPS8-224ENST00000488255 FAM160A2Q8N612 972 aaPredicted RBP10.87□□□□□ -0.67
VPS8-224ENST00000488255 PRDM9Q9NQV7 894 aa10.87□□□□□ -0.67
VPS8-224ENST00000488255 PCDHB15Q9Y5E8 787 aa10.87□□□□□ -0.67
VPS8-224ENST00000488255 USB1Q9BQ65 265 aaKnown RBP10.86□□□□□ -0.67
VPS8-224ENST00000488255 SALL2Q9Y467 1007 aaPredicted RBP10.86□□□□□ -0.67
VPS8-224ENST00000488255 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
VPS8-224ENST00000488255 LIMD1Q9UGP4 676 aa10.85□□□□□ -0.67
VPS8-224ENST00000488255 RNF223E7ERA6 249 aa10.84□□□□□ -0.67
VPS8-224ENST00000488255 SPTLC1O15269 473 aa10.84□□□□□ -0.67
VPS8-224ENST00000488255 RSPH6AQ9H0K4 717 aa10.84□□□□□ -0.67
VPS8-224ENST00000488255 CLK2P49760 499 aaKnown RBP10.82□□□□□ -0.68
VPS8-224ENST00000488255 CABLES1Q8TDN4 633 aa10.82□□□□□ -0.68
VPS8-224ENST00000488255 MTMR2Q13614 643 aa10.81□□□□□ -0.68
VPS8-224ENST00000488255 RETREG3Q86VR2 466 aa10.81□□□□□ -0.68
VPS8-224ENST00000488255 NUTM2BA6NNL0 878 aaPredicted RBP10.8□□□□□ -0.68
VPS8-224ENST00000488255 NUTM2EB1AL46 878 aaPredicted RBP10.8□□□□□ -0.68
VPS8-224ENST00000488255 MSS51Q4VC12 460 aa10.8□□□□□ -0.68
VPS8-224ENST00000488255 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
VPS8-224ENST00000488255 NUTM2AQ8IVF1 878 aaPredicted RBP10.8□□□□□ -0.68
VPS8-224ENST00000488255 HRCP23327 699 aa10.79□□□□□ -0.68
VPS8-224ENST00000488255 QPCTQ16769 361 aa10.79□□□□□ -0.68
VPS8-224ENST00000488255 PROCA1Q8NCQ7 364 aaPredicted RBP10.79□□□□□ -0.68
VPS8-224ENST00000488255 FCF1Q9Y324 198 aaKnown RBP10.79□□□□□ -0.68
VPS8-224ENST00000488255 GJA5P36382 358 aa10.78□□□□□ -0.68
VPS8-224ENST00000488255 PRR7Q8TB68 274 aa10.78□□□□□ -0.68
VPS8-224ENST00000488255 TSC1Q92574 1164 aa10.78□□□□□ -0.68
VPS8-224ENST00000488255 PRKD2Q9BZL6 878 aa10.78□□□□□ -0.68
VPS8-224ENST00000488255 ZBTB3Q9H5J0 574 aa10.78□□□□□ -0.68
VPS8-224ENST00000488255 SKIV2LQ15477 1246 aaKnown RBP10.77□□□□□ -0.69
VPS8-224ENST00000488255 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
VPS8-224ENST00000488255 CCDC24Q8N4L8 307 aa10.77□□□□□ -0.69
VPS8-224ENST00000488255 ANKLE1Q8NAG6 615 aa10.77□□□□□ -0.69
VPS8-224ENST00000488255 JUNDP17535 347 aa10.75□□□□□ -0.69
VPS8-224ENST00000488255 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
VPS8-224ENST00000488255 SPDYE5A6NIY4 337 aa10.74□□□□□ -0.69
VPS8-224ENST00000488255 DXOO77932 396 aaKnown RBP10.74□□□□□ -0.69
VPS8-224ENST00000488255 RTL5Q5HYW3 569 aaPredicted RBP10.74□□□□□ -0.69
VPS8-224ENST00000488255 CFAP99D6REC4 459 aa10.73□□□□□ -0.69
VPS8-224ENST00000488255 MMP16P51512 607 aa10.73□□□□□ -0.69
VPS8-224ENST00000488255 PRPF38BQ5VTL8 546 aaKnown RBP10.73□□□□□ -0.69
VPS8-224ENST00000488255 LILRB3O75022 631 aa10.72□□□□□ -0.69
VPS8-224ENST00000488255 SLC19A1P41440 591 aa10.72□□□□□ -0.69
VPS8-224ENST00000488255 LIAT1Q6ZQX7 453 aa10.71□□□□□ -0.69
VPS8-224ENST00000488255 PCMTD1Q96MG8 357 aaPredicted RBP10.71□□□□□ -0.69
VPS8-224ENST00000488255 RGS20O76081 388 aa10.7□□□□□ -0.7
VPS8-224ENST00000488255 TUSC1Q2TAM9 212 aa10.7□□□□□ -0.7
VPS8-224ENST00000488255 EMID1Q96A84 441 aaPredicted RBP10.7□□□□□ -0.7
VPS8-224ENST00000488255 FBXO31Q5XUX0 539 aaPredicted RBP10.69□□□□□ -0.7
VPS8-224ENST00000488255 NUDT12Q9BQG2 462 aa10.69□□□□□ -0.7
VPS8-224ENST00000488255 ZBTB24O43167 697 aaPredicted RBP10.68□□□□□ -0.7
VPS8-224ENST00000488255 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
VPS8-224ENST00000488255 V9GY48 417 aaPredicted RBP10.67□□□□□ -0.7
VPS8-224ENST00000488255 CCNYL3P0C7X3 344 aa10.65□□□□□ -0.7
VPS8-224ENST00000488255 CTHP32929 405 aa10.65□□□□□ -0.7
VPS8-224ENST00000488255 SPRYD7Q5W111 196 aa10.65□□□□□ -0.7
VPS8-224ENST00000488255 HELBQ8NG08 1087 aaPredicted RBP10.65□□□□□ -0.7
VPS8-224ENST00000488255 PER1O15534 1290 aaPredicted RBP10.64□□□□□ -0.71
VPS8-224ENST00000488255 PTPRNQ16849 979 aa10.64□□□□□ -0.71
VPS8-224ENST00000488255 DESI1Q6ICB0 168 aa10.64□□□□□ -0.71
VPS8-224ENST00000488255 GOPCQ9HD26 462 aa10.64□□□□□ -0.71
VPS8-224ENST00000488255 AP1G2O75843 785 aa10.63□□□□□ -0.71
VPS8-224ENST00000488255 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
VPS8-224ENST00000488255 LYPD8Q6UX82 237 aa10.63□□□□□ -0.71
VPS8-224ENST00000488255 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
VPS8-224ENST00000488255 CTDSPL2Q05D32 466 aa10.62□□□□□ -0.71
VPS8-224ENST00000488255 ZNF697Q5TEC3 545 aa10.62□□□□□ -0.71
VPS8-224ENST00000488255 RPIAP49247 311 aa10.61□□□□□ -0.71
VPS8-224ENST00000488255 EVA1BQ9NVM1 165 aa10.61□□□□□ -0.71
VPS8-224ENST00000488255 RFC5P40937 340 aa10.6□□□□□ -0.71
VPS8-224ENST00000488255 FOXC1Q12948 553 aa10.6□□□□□ -0.71
VPS8-224ENST00000488255 TRIM32Q13049 653 aa10.6□□□□□ -0.71
VPS8-224ENST00000488255 PPP2R2DQ66LE6 453 aa10.6□□□□□ -0.71
VPS8-224ENST00000488255 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
VPS8-224ENST00000488255 MAP10Q9P2G4 905 aa10.6□□□□□ -0.71
VPS8-224ENST00000488255 KCNH2Q12809 1159 aa10.59□□□□□ -0.71
VPS8-224ENST00000488255 LRRN4Q8WUT4 740 aa10.58□□□□□ -0.72
VPS8-224ENST00000488255 IRX2Q9BZI1 471 aaPredicted RBP10.58□□□□□ -0.72
VPS8-224ENST00000488255 UNC93B1Q9H1C4 597 aa10.58□□□□□ -0.72
VPS8-224ENST00000488255 TNFRSF10AO00220 468 aa10.57□□□□□ -0.72
VPS8-224ENST00000488255 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
VPS8-224ENST00000488255 PDZRN3Q9UPQ7 1066 aa10.56□□□□□ -0.72
VPS8-224ENST00000488255 GFRA3O60609 400 aa10.55□□□□□ -0.72
VPS8-224ENST00000488255 F12P00748 615 aaPredicted RBP10.54□□□□□ -0.72
VPS8-224ENST00000488255 BAP1Q92560 729 aa10.54□□□□□ -0.72
VPS8-224ENST00000488255 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
VPS8-224ENST00000488255 SKOR1P84550 965 aa10.52□□□□□ -0.73
VPS8-224ENST00000488255 NR6A1Q15406 480 aa10.51□□□□□ -0.73
VPS8-224ENST00000488255 TRIM67Q6ZTA4 783 aa10.51□□□□□ -0.73
VPS8-224ENST00000488255 PKD2L1Q9P0L9 805 aa10.51□□□□□ -0.73
VPS8-224ENST00000488255 GDF9O60383 454 aa10.5□□□□□ -0.73
VPS8-224ENST00000488255 SH3BP2P78314 561 aa10.5□□□□□ -0.73
VPS8-224ENST00000488255 TMEM259Q4ZIN3 620 aa10.5□□□□□ -0.73
VPS8-224ENST00000488255 RC3H1Q5TC82 1133 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms