RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 RNF40O75150 1001 aa6.68□□□□□ -1.34
CDC42BPA-213ENST00000488131 PRR20EP86478 221 aa6.68□□□□□ -1.34
CDC42BPA-213ENST00000488131 PRR20CP86479 221 aa6.68□□□□□ -1.34
CDC42BPA-213ENST00000488131 PRR20DP86480 221 aa6.68□□□□□ -1.34
CDC42BPA-213ENST00000488131 PRR20BP86481 221 aa6.68□□□□□ -1.34
CDC42BPA-213ENST00000488131 PRR20AP86496 221 aa6.68□□□□□ -1.34
CDC42BPA-213ENST00000488131 DAXXQ9UER7 740 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-213ENST00000488131 C3orf80F5H4A9 247 aa6.67□□□□□ -1.34
CDC42BPA-213ENST00000488131 PXYLP1Q8TE99 480 aa6.67□□□□□ -1.34
CDC42BPA-213ENST00000488131 EEA1Q15075 1411 aa6.67□□□□□ -1.34
CDC42BPA-213ENST00000488131 TRIM67Q6ZTA4 783 aa6.66□□□□□ -1.34
CDC42BPA-213ENST00000488131 NUDT18Q6ZVK8 323 aa6.66□□□□□ -1.34
CDC42BPA-213ENST00000488131 GPCPD1Q9NPB8 672 aa6.66□□□□□ -1.34
CDC42BPA-213ENST00000488131 SSTR3P32745 418 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-213ENST00000488131 CLCN1P35523 988 aa6.66□□□□□ -1.34
CDC42BPA-213ENST00000488131 FAM181BA6NEQ2 426 aa6.65□□□□□ -1.34
CDC42BPA-213ENST00000488131 OATP04181 439 aa6.64□□□□□ -1.35
CDC42BPA-213ENST00000488131 NEFLP07196 543 aa6.64□□□□□ -1.35
CDC42BPA-213ENST00000488131 ZNF516Q92618 1163 aa6.64□□□□□ -1.35
CDC42BPA-213ENST00000488131 FAM217BQ9NTX9 383 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-213ENST00000488131 DHX57Q6P158 1386 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-213ENST00000488131 APLP1P51693 650 aa6.64□□□□□ -1.35
CDC42BPA-213ENST00000488131 GOPCQ9HD26 462 aa6.64□□□□□ -1.35
CDC42BPA-213ENST00000488131 SALL2Q9Y467 1007 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-213ENST00000488131 CUX2O14529 1486 aa6.62□□□□□ -1.35
CDC42BPA-213ENST00000488131 SLC19A1P41440 591 aa6.62□□□□□ -1.35
CDC42BPA-213ENST00000488131 EYA1Q99502 592 aa6.62□□□□□ -1.35
CDC42BPA-213ENST00000488131 BEGAINQ9BUH8 593 aa6.62□□□□□ -1.35
CDC42BPA-213ENST00000488131 BAZ1AQ9NRL2 1556 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-213ENST00000488131 GOLGA3Q08378 1498 aa6.62□□□□□ -1.35
CDC42BPA-213ENST00000488131 SWT1Q5T5J6 900 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-213ENST00000488131 ZNF598Q86UK7 904 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-213ENST00000488131 FAM187AA6NFU0 413 aa6.61□□□□□ -1.35
CDC42BPA-213ENST00000488131 ZPR1O75312 459 aa6.61□□□□□ -1.35
CDC42BPA-213ENST00000488131 AAASQ9NRG9 546 aa6.61□□□□□ -1.35
CDC42BPA-213ENST00000488131 NACADO15069 1562 aa6.61□□□□□ -1.35
CDC42BPA-213ENST00000488131 COPS2P61201 443 aa6.6□□□□□ -1.35
CDC42BPA-213ENST00000488131 NFX1Q12986 1120 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-213ENST00000488131 SUZ12Q15022 739 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-213ENST00000488131 SH3D19Q5HYK7 790 aa6.6□□□□□ -1.35
CDC42BPA-213ENST00000488131 PROCA1Q8NCQ7 364 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-213ENST00000488131 NKX2-3Q8TAU0 364 aa6.6□□□□□ -1.35
CDC42BPA-213ENST00000488131 PCDHB3Q9Y5E6 796 aa6.6□□□□□ -1.35
CDC42BPA-213ENST00000488131 RCCD1A6NED2 376 aa6.59□□□□□ -1.35
CDC42BPA-213ENST00000488131 KIF21BO75037 1637 aa6.59□□□□□ -1.35
CDC42BPA-213ENST00000488131 SPRYD7Q5W111 196 aa6.59□□□□□ -1.35
CDC42BPA-213ENST00000488131 RBM46Q8TBY0 533 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-213ENST00000488131 ABCC8Q09428 1581 aa6.58□□□□□ -1.36
CDC42BPA-213ENST00000488131 VPS8Q8N3P4 1428 aa6.58□□□□□ -1.36
CDC42BPA-213ENST00000488131 CDK11AQ9UQ88 783 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-213ENST00000488131 CCER2I3L3R5 266 aa6.58□□□□□ -1.36
CDC42BPA-213ENST00000488131 SKIV2LQ15477 1246 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-213ENST00000488131 KMT5BQ4FZB7 885 aa6.58□□□□□ -1.36
CDC42BPA-213ENST00000488131 FBXO31Q5XUX0 539 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-213ENST00000488131 ZMYND15Q9H091 742 aa6.58□□□□□ -1.36
CDC42BPA-213ENST00000488131 CCDC88BA6NC98 1476 aa6.57□□□□□ -1.36
CDC42BPA-213ENST00000488131 MYSM1Q5VVJ2 828 aa6.57□□□□□ -1.36
CDC42BPA-213ENST00000488131 CRIPAKQ8N1N5 446 aa6.57□□□□□ -1.36
CDC42BPA-213ENST00000488131 PCMTD1Q96MG8 357 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-213ENST00000488131 POLR3EQ9NVU0 708 aa6.57□□□□□ -1.36
CDC42BPA-213ENST00000488131 SCRIBQ14160 1630 aa6.56□□□□□ -1.36
CDC42BPA-213ENST00000488131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-213ENST00000488131 ITGAEP38570 1179 aa6.56□□□□□ -1.36
CDC42BPA-213ENST00000488131 MROH2BQ7Z745 1585 aa6.56□□□□□ -1.36
CDC42BPA-213ENST00000488131 C11orf95C9JLR9 678 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-213ENST00000488131 NOP58Q9Y2X3 529 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-213ENST00000488131 CLIP1P30622 1438 aa6.55□□□□□ -1.36
CDC42BPA-213ENST00000488131 ST8SIA5O15466 376 aa6.55□□□□□ -1.36
CDC42BPA-213ENST00000488131 DNAJB2P25686 324 aa6.55□□□□□ -1.36
CDC42BPA-213ENST00000488131 ANKLE1Q8NAG6 615 aa6.55□□□□□ -1.36
CDC42BPA-213ENST00000488131 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDC42BPA-213ENST00000488131 TBC1D2Q9BYX2 928 aa6.55□□□□□ -1.36
CDC42BPA-213ENST00000488131 WIZO95785 1651 aa6.54□□□□□ -1.36
CDC42BPA-213ENST00000488131 BAZ1BQ9UIG0 1483 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-213ENST00000488131 CD46P15529 392 aa6.54□□□□□ -1.36
CDC42BPA-213ENST00000488131 RSPH6AQ9H0K4 717 aa6.54□□□□□ -1.36
CDC42BPA-213ENST00000488131 CEP164Q9UPV0 1460 aa6.54□□□□□ -1.36
CDC42BPA-213ENST00000488131 RNF223E7ERA6 249 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 GDF9O60383 454 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 SPIRE2Q8WWL2 714 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 TMEM134Q9H6X4 195 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 SOGA1O94964 1423 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 RRBP1Q9P2E9 1410 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 RSPH4AQ5TD94 716 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 ZNF697Q5TEC3 545 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 CCDC136Q96JN2 1154 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 LIMD1Q9UGP4 676 aa6.53□□□□□ -1.36
CDC42BPA-213ENST00000488131 WASHC2AQ641Q2 1341 aa6.52□□□□□ -1.37
CDC42BPA-213ENST00000488131 NR1I2O75469 434 aa6.52□□□□□ -1.37
CDC42BPA-213ENST00000488131 BLOC1S3Q6QNY0 202 aa6.52□□□□□ -1.37
CDC42BPA-213ENST00000488131 MAPKBP1O60336 1514 aa6.52□□□□□ -1.37
CDC42BPA-213ENST00000488131 DDX11L8A8MPP1 907 aa6.51□□□□□ -1.37
CDC42BPA-213ENST00000488131 ACTN4O43707 911 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-213ENST00000488131 SMARCA2P51531 1590 aa6.51□□□□□ -1.37
CDC42BPA-213ENST00000488131 EIF5BO60841 1220 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-213ENST00000488131 PPP1R15AO75807 674 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-213ENST00000488131 CLK2P49760 499 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-213ENST00000488131 FLIIQ13045 1269 aa6.51□□□□□ -1.37
CDC42BPA-213ENST00000488131 EMID1Q96A84 441 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-213ENST00000488131 C1orf115Q9H7X2 142 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms