RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 WNT7AO00755 349 aa7.35□□□□□ -1.23
HFM1-208ENST00000488023 P3H3Q8IVL6 736 aa7.35□□□□□ -1.23
HFM1-208ENST00000488023 KCTD17Q8N5Z5 321 aa7.35□□□□□ -1.23
HFM1-208ENST00000488023 FCHSD2O94868 740 aa7.33□□□□□ -1.24
HFM1-208ENST00000488023 TPRNQ4KMQ1 711 aa7.33□□□□□ -1.24
HFM1-208ENST00000488023 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
HFM1-208ENST00000488023 HPS1Q92902 700 aa7.33□□□□□ -1.24
HFM1-208ENST00000488023 PXYLP1Q8TE99 480 aa7.32□□□□□ -1.24
HFM1-208ENST00000488023 ERBB4Q15303 1308 aa7.31□□□□□ -1.24
HFM1-208ENST00000488023 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
HFM1-208ENST00000488023 H3BM21 787 aa7.31□□□□□ -1.24
HFM1-208ENST00000488023 OATP04181 439 aa7.31□□□□□ -1.24
HFM1-208ENST00000488023 VEGFBP49765 207 aa7.31□□□□□ -1.24
HFM1-208ENST00000488023 GSK3AP49840 483 aa7.31□□□□□ -1.24
HFM1-208ENST00000488023 FAM160A2Q8N612 972 aaPredicted RBP7.31□□□□□ -1.24
HFM1-208ENST00000488023 KCNMA1Q12791 1236 aa7.3□□□□□ -1.24
HFM1-208ENST00000488023 THAP11Q96EK4 314 aa7.3□□□□□ -1.24
HFM1-208ENST00000488023 MRGPRX2Q96LB1 330 aa7.3□□□□□ -1.24
HFM1-208ENST00000488023 RSPH4AQ5TD94 716 aa7.29□□□□□ -1.24
HFM1-208ENST00000488023 SEMA3EO15041 775 aa7.28□□□□□ -1.24
HFM1-208ENST00000488023 ZBTB24O43167 697 aaPredicted RBP7.28□□□□□ -1.24
HFM1-208ENST00000488023 METTL3Q86U44 580 aaKnown RBP7.27□□□□□ -1.25
HFM1-208ENST00000488023 PRDM9Q9NQV7 894 aa7.27□□□□□ -1.25
HFM1-208ENST00000488023 HIC1Q14526 733 aa7.26□□□□□ -1.25
HFM1-208ENST00000488023 MORN1Q5T089 497 aa7.26□□□□□ -1.25
HFM1-208ENST00000488023 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
HFM1-208ENST00000488023 TRIM32Q13049 653 aa7.25□□□□□ -1.25
HFM1-208ENST00000488023 DAXXQ9UER7 740 aaPredicted RBP7.24□□□□□ -1.25
HFM1-208ENST00000488023 KRTAP9-6A0A140TA67 174 aa7.23□□□□□ -1.25
HFM1-208ENST00000488023 FMNL1O95466 1100 aaPredicted RBP7.23□□□□□ -1.25
HFM1-208ENST00000488023 TRIM46Q7Z4K8 759 aa7.23□□□□□ -1.25
HFM1-208ENST00000488023 KRTAP1-3Q8IUG1 177 aa7.23□□□□□ -1.25
HFM1-208ENST00000488023 RDH13Q8NBN7 331 aa7.23□□□□□ -1.25
HFM1-208ENST00000488023 FECHP22830 423 aa7.22□□□□□ -1.25
HFM1-208ENST00000488023 RBM26Q5T8P6 1007 aaKnown RBP7.22□□□□□ -1.25
HFM1-208ENST00000488023 FUT2Q10981 343 aa7.22□□□□□ -1.25
HFM1-208ENST00000488023 TMEM151AQ8N4L1 468 aa7.22□□□□□ -1.25
HFM1-208ENST00000488023 DDX11L8A8MPP1 907 aa7.21□□□□□ -1.26
HFM1-208ENST00000488023 GNPATO15228 680 aa7.21□□□□□ -1.26
HFM1-208ENST00000488023 BMP1P13497 986 aa7.21□□□□□ -1.26
HFM1-208ENST00000488023 ATP6V1AP38606 617 aa7.21□□□□□ -1.26
HFM1-208ENST00000488023 REPIN1Q9BWE0 567 aaKnown RBP7.21□□□□□ -1.26
HFM1-208ENST00000488023 SLC27A5Q9Y2P5 690 aa7.21□□□□□ -1.26
HFM1-208ENST00000488023 TESPA1A2RU30 521 aaPredicted RBP7.2□□□□□ -1.26
HFM1-208ENST00000488023 BRICD5Q6PL45 260 aa7.2□□□□□ -1.26
HFM1-208ENST00000488023 SALL2Q9Y467 1007 aaPredicted RBP7.2□□□□□ -1.26
HFM1-208ENST00000488023 GCGRP47871 477 aa7.19□□□□□ -1.26
HFM1-208ENST00000488023 MSS51Q4VC12 460 aa7.19□□□□□ -1.26
HFM1-208ENST00000488023 NLRP7Q8WX94 980 aa7.19□□□□□ -1.26
HFM1-208ENST00000488023 GPR37O15354 613 aa7.19□□□□□ -1.26
HFM1-208ENST00000488023 GDF11O95390 407 aa7.19□□□□□ -1.26
HFM1-208ENST00000488023 RASSF7Q02833 373 aa7.19□□□□□ -1.26
HFM1-208ENST00000488023 RC3H1Q5TC82 1133 aaKnown RBP7.18□□□□□ -1.26
HFM1-208ENST00000488023 SMYD5Q6GMV2 418 aa7.18□□□□□ -1.26
HFM1-208ENST00000488023 XP32Q5T750 250 aa7.17□□□□□ -1.26
HFM1-208ENST00000488023 VSIG8P0DPA2 414 aa7.16□□□□□ -1.26
HFM1-208ENST00000488023 SULF1Q8IWU6 871 aa7.16□□□□□ -1.26
HFM1-208ENST00000488023 PHOX2BQ99453 314 aa7.16□□□□□ -1.26
HFM1-208ENST00000488023 SKOR1P84550 965 aa7.16□□□□□ -1.26
HFM1-208ENST00000488023 RNF19BQ6ZMZ0 732 aa7.16□□□□□ -1.26
HFM1-208ENST00000488023 TIMELESSQ9UNS1 1208 aa7.16□□□□□ -1.26
HFM1-208ENST00000488023 CAPN5O15484 640 aaPredicted RBP7.15□□□□□ -1.27
HFM1-208ENST00000488023 ALDH1A1P00352 501 aa7.15□□□□□ -1.27
HFM1-208ENST00000488023 MMP16P51512 607 aa7.14□□□□□ -1.27
HFM1-208ENST00000488023 GRIPAP1Q4V328 841 aa7.12□□□□□ -1.27
HFM1-208ENST00000488023 ZFP42Q96MM3 310 aa7.12□□□□□ -1.27
HFM1-208ENST00000488023 WNT7BP56706 349 aa7.12□□□□□ -1.27
HFM1-208ENST00000488023 TULP1O00294 542 aaPredicted RBP7.11□□□□□ -1.27
HFM1-208ENST00000488023 Q3C1V9 767 aa7.1□□□□□ -1.27
HFM1-208ENST00000488023 SIAH2O43255 324 aa7.09□□□□□ -1.27
HFM1-208ENST00000488023 DXOO77932 396 aaKnown RBP7.08□□□□□ -1.28
HFM1-208ENST00000488023 RNF225M0QZC1 329 aaPredicted RBP7.07□□□□□ -1.28
HFM1-208ENST00000488023 CD46P15529 392 aa7.07□□□□□ -1.28
HFM1-208ENST00000488023 GPAT2Q6NUI2 795 aa7.07□□□□□ -1.28
HFM1-208ENST00000488023 GPIHBP1Q8IV16 184 aa7.07□□□□□ -1.28
HFM1-208ENST00000488023 ADAMTS8Q9UP79 889 aa7.07□□□□□ -1.28
HFM1-208ENST00000488023 SOBPA7XYQ1 873 aa7.06□□□□□ -1.28
HFM1-208ENST00000488023 USB1Q9BQ65 265 aaKnown RBP7.06□□□□□ -1.28
HFM1-208ENST00000488023 WASF2Q9Y6W5 498 aa7.06□□□□□ -1.28
HFM1-208ENST00000488023 IGHA1P01876 353 aa7.06□□□□□ -1.28
HFM1-208ENST00000488023 CCDC24Q8N4L8 307 aa7.06□□□□□ -1.28
HFM1-208ENST00000488023 KDM4AO75164 1064 aa7.05□□□□□ -1.28
HFM1-208ENST00000488023 DNMT3AQ9Y6K1 912 aaPredicted RBP7.04□□□□□ -1.28
HFM1-208ENST00000488023 PSMG3-AS1Q96PY0 264 aa7.03□□□□□ -1.28
HFM1-208ENST00000488023 MRPL14Q6P1L8 145 aaKnown RBP7.03□□□□□ -1.28
HFM1-208ENST00000488023 HLA-CQ95604 372 aa7.03□□□□□ -1.28
HFM1-208ENST00000488023 USP46P62068 366 aa7.02□□□□□ -1.29
HFM1-208ENST00000488023 EHBP1Q8NDI1 1231 aa7.02□□□□□ -1.29
HFM1-208ENST00000488023 PURBQ96QR8 312 aaKnown RBP7.02□□□□□ -1.29
HFM1-208ENST00000488023 KRT76Q01546 638 aa7.01□□□□□ -1.29
HFM1-208ENST00000488023 MAP2K5Q13163 448 aa7.01□□□□□ -1.29
HFM1-208ENST00000488023 GTF3C3Q9Y5Q9 886 aa7.01□□□□□ -1.29
HFM1-208ENST00000488023 PPFIA3O75145 1194 aa7□□□□□ -1.29
HFM1-208ENST00000488023 SCARF1Q14162 830 aa7□□□□□ -1.29
HFM1-208ENST00000488023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7□□□□□ -1.292e-6■■■■■ 31.4
HFM1-208ENST00000488023 IRF6O14896 467 aa7□□□□□ -1.29
HFM1-208ENST00000488023 HOXA2O43364 376 aa7□□□□□ -1.29
HFM1-208ENST00000488023 MDM2Q00987 491 aaPredicted RBP7□□□□□ -1.29
HFM1-208ENST00000488023 JUNDP17535 347 aa6.99□□□□□ -1.29
HFM1-208ENST00000488023 IRS1P35568 1242 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms