RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 CLK2P49760 499 aaKnown RBP13.29□□□□□ -0.28
USP34-216ENST00000487547 PRPF38BQ5VTL8 546 aaKnown RBP13.29□□□□□ -0.28
USP34-216ENST00000487547 THAP11Q96EK4 314 aa13.29□□□□□ -0.28
USP34-216ENST00000487547 POLR3EQ9NVU0 708 aa13.28□□□□□ -0.28
USP34-216ENST00000487547 GGCXP38435 758 aa13.27□□□□□ -0.29
USP34-216ENST00000487547 HLA-CQ95604 372 aa13.27□□□□□ -0.29
USP34-216ENST00000487547 PCDHGC3Q9UN70 934 aa13.27□□□□□ -0.29
USP34-216ENST00000487547 C6orf229H3BNL8 230 aa13.26□□□□□ -0.29
USP34-216ENST00000487547 GUCA2AQ02747 115 aa13.26□□□□□ -0.29
USP34-216ENST00000487547 NKX2-3Q8TAU0 364 aa13.26□□□□□ -0.29
USP34-216ENST00000487547 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
USP34-216ENST00000487547 USB1Q9BQ65 265 aaKnown RBP13.26□□□□□ -0.29
USP34-216ENST00000487547 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
USP34-216ENST00000487547 MTMR2Q13614 643 aa13.25□□□□□ -0.29
USP34-216ENST00000487547 ZBTB3Q9H5J0 574 aa13.25□□□□□ -0.29
USP34-216ENST00000487547 RETREG3Q86VR2 466 aa13.24□□□□□ -0.29
USP34-216ENST00000487547 LIMD1Q9UGP4 676 aa13.24□□□□□ -0.29
USP34-216ENST00000487547 MSS51Q4VC12 460 aa13.23□□□□□ -0.29
USP34-216ENST00000487547 PPP1R18Q6NYC8 613 aa13.23□□□□□ -0.29
USP34-216ENST00000487547 RNF19BQ6ZMZ0 732 aa13.23□□□□□ -0.29
USP34-216ENST00000487547 SLC6A16Q9GZN6 736 aa13.23□□□□□ -0.29
USP34-216ENST00000487547 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
USP34-216ENST00000487547 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.29
USP34-216ENST00000487547 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.29
USP34-216ENST00000487547 TLL1O43897 1013 aa13.21□□□□□ -0.29
USP34-216ENST00000487547 NUTM2DQ5VT03 806 aaPredicted RBP13.21□□□□□ -0.29
USP34-216ENST00000487547 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.29
USP34-216ENST00000487547 LILRB3O75022 631 aa13.2□□□□□ -0.3
USP34-216ENST00000487547 CSPP1Q1MSJ5 1256 aa13.2□□□□□ -0.3
USP34-216ENST00000487547 HRCP23327 699 aa13.19□□□□□ -0.3
USP34-216ENST00000487547 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
USP34-216ENST00000487547 TMEM132AQ24JP5 1023 aa13.18□□□□□ -0.3
USP34-216ENST00000487547 FAM160A2Q8N612 972 aaPredicted RBP13.18□□□□□ -0.3
USP34-216ENST00000487547 SYMPKQ92797 1274 aaKnown RBP13.18□□□□□ -0.3
USP34-216ENST00000487547 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.18□□□□□ -0.3
USP34-216ENST00000487547 PROCA1Q8NCQ7 364 aaPredicted RBP13.17□□□□□ -0.3
USP34-216ENST00000487547 DESI1Q6ICB0 168 aa13.16□□□□□ -0.3
USP34-216ENST00000487547 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
USP34-216ENST00000487547 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
USP34-216ENST00000487547 S1PR4O95977 384 aa13.14□□□□□ -0.31
USP34-216ENST00000487547 MMP16P51512 607 aa13.14□□□□□ -0.31
USP34-216ENST00000487547 QPCTQ16769 361 aa13.14□□□□□ -0.31
USP34-216ENST00000487547 IRX2Q9BZI1 471 aaPredicted RBP13.14□□□□□ -0.31
USP34-216ENST00000487547 JUNDP17535 347 aa13.13□□□□□ -0.31
USP34-216ENST00000487547 CABLES1Q8TDN4 633 aa13.13□□□□□ -0.31
USP34-216ENST00000487547 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
USP34-216ENST00000487547 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
USP34-216ENST00000487547 HELBQ8NG08 1087 aaPredicted RBP13.11□□□□□ -0.31
USP34-216ENST00000487547 PRKD2Q9BZL6 878 aa13.11□□□□□ -0.31
USP34-216ENST00000487547 RNF223E7ERA6 249 aa13.09□□□□□ -0.31
USP34-216ENST00000487547 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
USP34-216ENST00000487547 V9GY48 417 aaPredicted RBP13.09□□□□□ -0.31
USP34-216ENST00000487547 CFAP99D6REC4 459 aa13.07□□□□□ -0.32
USP34-216ENST00000487547 TMEM259Q4ZIN3 620 aa13.07□□□□□ -0.32
USP34-216ENST00000487547 PTPRNQ16849 979 aa13.06□□□□□ -0.32
USP34-216ENST00000487547 PRDM9Q9NQV7 894 aa13.06□□□□□ -0.32
USP34-216ENST00000487547 LYPD8Q6UX82 237 aa13.05□□□□□ -0.32
USP34-216ENST00000487547 TSC1Q92574 1164 aa13.05□□□□□ -0.32
USP34-216ENST00000487547 RFC5P40937 340 aa13.04□□□□□ -0.32
USP34-216ENST00000487547 FCF1Q9Y324 198 aaKnown RBP13.03□□□□□ -0.32
USP34-216ENST00000487547 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
USP34-216ENST00000487547 NUDT12Q9BQG2 462 aa13.02□□□□□ -0.33
USP34-216ENST00000487547 CCNYL3P0C7X3 344 aa13.01□□□□□ -0.33
USP34-216ENST00000487547 EMID1Q96A84 441 aaPredicted RBP13.01□□□□□ -0.33
USP34-216ENST00000487547 ZBTB24O43167 697 aaPredicted RBP13□□□□□ -0.33
USP34-216ENST00000487547 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
USP34-216ENST00000487547 EVA1BQ9NVM1 165 aa13□□□□□ -0.33
USP34-216ENST00000487547 AP1G2O75843 785 aa12.99□□□□□ -0.33
USP34-216ENST00000487547 RPIAP49247 311 aa12.99□□□□□ -0.33
USP34-216ENST00000487547 BANK1Q8NDB2 785 aa12.99□□□□□ -0.33
USP34-216ENST00000487547 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
USP34-216ENST00000487547 FBXO31Q5XUX0 539 aaPredicted RBP12.97□□□□□ -0.33
USP34-216ENST00000487547 CD2BP2O95400 341 aaKnown RBP12.96□□□□□ -0.33
USP34-216ENST00000487547 SLC19A1P41440 591 aa12.96□□□□□ -0.33
USP34-216ENST00000487547 KCNH2Q12809 1159 aa12.96□□□□□ -0.33
USP34-216ENST00000487547 LAPTM4AQ15012 233 aa12.96□□□□□ -0.33
USP34-216ENST00000487547 CTHP32929 405 aa12.93□□□□□ -0.34
USP34-216ENST00000487547 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
USP34-216ENST00000487547 GFRA3O60609 400 aa12.92□□□□□ -0.34
USP34-216ENST00000487547 PLA2G2CQ5R387 149 aa12.92□□□□□ -0.34
USP34-216ENST00000487547 APBB1O00213 710 aa12.91□□□□□ -0.34
USP34-216ENST00000487547 USP17L8P0C7I0 530 aa12.91□□□□□ -0.34
USP34-216ENST00000487547 LIAT1Q6ZQX7 453 aa12.91□□□□□ -0.34
USP34-216ENST00000487547 ARMC2Q8NEN0 867 aa12.91□□□□□ -0.34
USP34-216ENST00000487547 SOCS7O14512 581 aa12.9□□□□□ -0.34
USP34-216ENST00000487547 F12P00748 615 aaPredicted RBP12.9□□□□□ -0.34
USP34-216ENST00000487547 SPRYD7Q5W111 196 aa12.9□□□□□ -0.34
USP34-216ENST00000487547 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
USP34-216ENST00000487547 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
USP34-216ENST00000487547 Q6ZNB5 142 aa12.89□□□□□ -0.35
USP34-216ENST00000487547 UNC93B1Q9H1C4 597 aa12.88□□□□□ -0.35
USP34-216ENST00000487547 PTCRAQ6ISU1 281 aaPredicted RBP12.87□□□□□ -0.35
USP34-216ENST00000487547 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
USP34-216ENST00000487547 LRRN4Q8WUT4 740 aa12.87□□□□□ -0.35
USP34-216ENST00000487547 TRIM32Q13049 653 aa12.86□□□□□ -0.35
USP34-216ENST00000487547 ZNF598Q86UK7 904 aaKnown RBP12.86□□□□□ -0.35
USP34-216ENST00000487547 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
USP34-216ENST00000487547 MAP10Q9P2G4 905 aa12.85□□□□□ -0.35
USP34-216ENST00000487547 WNT7BP56706 349 aa12.84□□□□□ -0.35
USP34-216ENST00000487547 PRM3Q9NNZ6 103 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms