RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
PRDM2-208ENST00000487453 CDC42BPGQ6DT37 1551 aa18.1■□□□□ 0.49
PRDM2-208ENST00000487453 ADGRB2O60241 1585 aa18.08■□□□□ 0.49
PRDM2-208ENST00000487453 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
PRDM2-208ENST00000487453 DCCP43146 1447 aa18.06■□□□□ 0.48
PRDM2-208ENST00000487453 CENPJQ9HC77 1338 aaPredicted RBP18.06■□□□□ 0.48
PRDM2-208ENST00000487453 USP47Q96K76 1375 aa18.05■□□□□ 0.48
PRDM2-208ENST00000487453 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
PRDM2-208ENST00000487453 C19orf44Q9H6X5 657 aa18.05■□□□□ 0.48
PRDM2-208ENST00000487453 FMN2Q9NZ56 1722 aa18.05■□□□□ 0.48
PRDM2-208ENST00000487453 ATF3P18847 181 aa18.04■□□□□ 0.48
PRDM2-208ENST00000487453 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
PRDM2-208ENST00000487453 UBAP1LF5GYI3 381 aa18.02■□□□□ 0.48
PRDM2-208ENST00000487453 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
PRDM2-208ENST00000487453 TOM1O60784 492 aa18■□□□□ 0.47
PRDM2-208ENST00000487453 SCAF1Q9H7N4 1312 aaKnown RBP17.99■□□□□ 0.47
PRDM2-208ENST00000487453 MST1RQ04912 1400 aa17.99■□□□□ 0.47
PRDM2-208ENST00000487453 TULP4Q9NRJ4 1543 aa17.99■□□□□ 0.47
PRDM2-208ENST00000487453 ROBO1Q9Y6N7 1651 aa17.99■□□□□ 0.47
PRDM2-208ENST00000487453 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
PRDM2-208ENST00000487453 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
PRDM2-208ENST00000487453 PIP4K2BP78356 416 aa17.97■□□□□ 0.47
PRDM2-208ENST00000487453 ITSN1Q15811 1721 aa17.97■□□□□ 0.47
PRDM2-208ENST00000487453 USP32Q8NFA0 1604 aa17.97■□□□□ 0.47
PRDM2-208ENST00000487453 SBNO2Q9Y2G9 1366 aa17.96■□□□□ 0.47
PRDM2-208ENST00000487453 ST20-MTHFSA0A0A6YYL1 179 aa17.96■□□□□ 0.47
PRDM2-208ENST00000487453 RGPD8O14715 1765 aaPredicted RBP17.96■□□□□ 0.47
PRDM2-208ENST00000487453 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.46
PRDM2-208ENST00000487453 C1orf167Q5SNV9 1468 aa17.95■□□□□ 0.46
PRDM2-208ENST00000487453 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
PRDM2-208ENST00000487453 SLAIN2Q9P270 581 aa17.94■□□□□ 0.46
PRDM2-208ENST00000487453 KIF1AQ12756 1690 aa17.93■□□□□ 0.46
PRDM2-208ENST00000487453 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
PRDM2-208ENST00000487453 ANKARQ7Z5J8 1434 aa17.93■□□□□ 0.46
PRDM2-208ENST00000487453 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
PRDM2-208ENST00000487453 ATP7BP35670 1465 aa17.93■□□□□ 0.46
PRDM2-208ENST00000487453 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
PRDM2-208ENST00000487453 HSPA5P11021 654 aaKnown RBP17.92■□□□□ 0.46
PRDM2-208ENST00000487453 CDK19Q9BWU1 502 aa17.91■□□□□ 0.46
PRDM2-208ENST00000487453 FBXO41Q8TF61 875 aa17.9■□□□□ 0.46
PRDM2-208ENST00000487453 ESCO1Q5FWF5 840 aa17.89■□□□□ 0.45
PRDM2-208ENST00000487453 TESK2Q96S53 571 aa17.89■□□□□ 0.45
PRDM2-208ENST00000487453 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
PRDM2-208ENST00000487453 NHSL1Q5SYE7 1610 aa17.89■□□□□ 0.45
PRDM2-208ENST00000487453 PHLPP1O60346 1717 aa17.88■□□□□ 0.45
PRDM2-208ENST00000487453 PRR36Q9H6K5 1346 aa17.88■□□□□ 0.45
PRDM2-208ENST00000487453 DISP3Q9P2K9 1392 aa17.88■□□□□ 0.45
PRDM2-208ENST00000487453 TMF1P82094 1093 aa17.87■□□□□ 0.45
PRDM2-208ENST00000487453 BRINP3Q76B58 766 aa17.87■□□□□ 0.45
PRDM2-208ENST00000487453 ORAI2Q96SN7 254 aa17.87■□□□□ 0.45
PRDM2-208ENST00000487453 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
PRDM2-208ENST00000487453 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
PRDM2-208ENST00000487453 AHDC1Q5TGY3 1603 aaPredicted RBP17.86■□□□□ 0.45
PRDM2-208ENST00000487453 PPIP5K1Q6PFW1 1433 aa17.85■□□□□ 0.45
PRDM2-208ENST00000487453 ATAD2Q6PL18 1390 aa17.84■□□□□ 0.45
PRDM2-208ENST00000487453 PHF8Q9UPP1 1060 aa17.83■□□□□ 0.44
PRDM2-208ENST00000487453 PMFBP1Q8TBY8 1022 aa17.82■□□□□ 0.44
PRDM2-208ENST00000487453 MYOM1P52179 1685 aa17.82■□□□□ 0.44
PRDM2-208ENST00000487453 COL16A1Q07092 1604 aaPredicted RBP17.81■□□□□ 0.44
PRDM2-208ENST00000487453 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
PRDM2-208ENST00000487453 CDCA8Q53HL2 280 aa17.8■□□□□ 0.44
PRDM2-208ENST00000487453 DDX17Q92841 729 aaKnown RBP17.8■□□□□ 0.44
PRDM2-208ENST00000487453 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
PRDM2-208ENST00000487453 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
PRDM2-208ENST00000487453 FOXO3O43524 673 aa17.79■□□□□ 0.44
PRDM2-208ENST00000487453 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
PRDM2-208ENST00000487453 PXDNQ92626 1479 aa17.78■□□□□ 0.44
PRDM2-208ENST00000487453 NGDNQ8NEJ9 315 aaKnown RBP17.78■□□□□ 0.44
PRDM2-208ENST00000487453 XPCQ01831 940 aaPredicted RBP17.77■□□□□ 0.44
PRDM2-208ENST00000487453 TMC1Q8TDI8 760 aa17.77■□□□□ 0.44
PRDM2-208ENST00000487453 CABP1Q9NZU7 370 aa17.77■□□□□ 0.44
PRDM2-208ENST00000487453 MON2Q7Z3U7 1717 aa17.76■□□□□ 0.43
PRDM2-208ENST00000487453 HSPA1LP34931 641 aa17.76■□□□□ 0.43
PRDM2-208ENST00000487453 TRPM3Q9HCF6 1732 aaPredicted RBP17.75■□□□□ 0.43
PRDM2-208ENST00000487453 ACEP12821 1306 aa17.75■□□□□ 0.43
PRDM2-208ENST00000487453 PUS7Q96PZ0 661 aaKnown RBP17.75■□□□□ 0.43
PRDM2-208ENST00000487453 POLR3AO14802 1390 aaPredicted RBP17.75■□□□□ 0.43
PRDM2-208ENST00000487453 NINLQ9Y2I6 1382 aa17.75■□□□□ 0.43
PRDM2-208ENST00000487453 NRKQ7Z2Y5 1582 aa17.74■□□□□ 0.43
PRDM2-208ENST00000487453 PLEKHG3A1L390 1219 aa17.74■□□□□ 0.43
PRDM2-208ENST00000487453 PSME1Q06323 249 aa17.74■□□□□ 0.43
PRDM2-208ENST00000487453 ILDR1Q86SU0 546 aaPredicted RBP17.73■□□□□ 0.43
PRDM2-208ENST00000487453 SHPRHQ149N8 1683 aa17.72■□□□□ 0.43
PRDM2-208ENST00000487453 CD163L1Q9NR16 1453 aa17.72■□□□□ 0.43
PRDM2-208ENST00000487453 KRT28Q7Z3Y7 464 aa17.72■□□□□ 0.43
PRDM2-208ENST00000487453 USP6P35125 1406 aa17.72■□□□□ 0.43
PRDM2-208ENST00000487453 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
PRDM2-208ENST00000487453 KIF7Q2M1P5 1343 aa17.72■□□□□ 0.43
PRDM2-208ENST00000487453 C11orf95C9JLR9 678 aaPredicted RBP17.71■□□□□ 0.43
PRDM2-208ENST00000487453 SLC12A5Q9H2X9 1139 aa17.71■□□□□ 0.43
PRDM2-208ENST00000487453 TNS3Q68CZ2 1445 aa17.71■□□□□ 0.43
PRDM2-208ENST00000487453 ALS2Q96Q42 1657 aa17.71■□□□□ 0.42
PRDM2-208ENST00000487453 A0A1W2PP64 1363 aa17.7■□□□□ 0.42
PRDM2-208ENST00000487453 KTN1Q86UP2 1357 aaKnown RBP17.7■□□□□ 0.42
PRDM2-208ENST00000487453 HDGFL2Q7Z4V5 671 aaPredicted RBP17.7■□□□□ 0.42
PRDM2-208ENST00000487453 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
PRDM2-208ENST00000487453 CCDC7Q96M83 1385 aa17.69■□□□□ 0.42
PRDM2-208ENST00000487453 PAK3O75914 559 aaPredicted RBP17.69■□□□□ 0.42
PRDM2-208ENST00000487453 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
PRDM2-208ENST00000487453 ANKRD36BQ8N2N9 1353 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms