RNA–Protein interactions for RNA: ENST00000487347.1

LPP-217, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-217ENST00000487347 KCNK17Q96T54 332 aa9.63□□□□□ -0.87
LPP-217ENST00000487347 ZBED2Q9BTP6 218 aa9.63□□□□□ -0.87
LPP-217ENST00000487347 USTQ9Y2C2 406 aa9.63□□□□□ -0.87
LPP-217ENST00000487347 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
LPP-217ENST00000487347 RFX1P22670 979 aa9.62□□□□□ -0.87
LPP-217ENST00000487347 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
LPP-217ENST00000487347 MFAP1P55081 439 aaKnown RBP9.61□□□□□ -0.87
LPP-217ENST00000487347 HELBQ8NG08 1087 aaPredicted RBP9.61□□□□□ -0.87
LPP-217ENST00000487347 UCN2Q96RP3 112 aa9.61□□□□□ -0.87
LPP-217ENST00000487347 MTMR7Q9Y216 660 aa9.61□□□□□ -0.87
LPP-217ENST00000487347 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
LPP-217ENST00000487347 BRD1O95696 1058 aa9.6□□□□□ -0.87
LPP-217ENST00000487347 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
LPP-217ENST00000487347 KCNA1Q09470 495 aa9.58□□□□□ -0.88
LPP-217ENST00000487347 PATL2C9JE40 543 aaKnown RBP9.57□□□□□ -0.88
LPP-217ENST00000487347 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
LPP-217ENST00000487347 FUT2Q10981 343 aa9.57□□□□□ -0.88
LPP-217ENST00000487347 RABGEF1Q9UJ41 708 aa9.57□□□□□ -0.88
LPP-217ENST00000487347 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
LPP-217ENST00000487347 TSC1Q92574 1164 aa9.56□□□□□ -0.88
LPP-217ENST00000487347 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
LPP-217ENST00000487347 C6orf229H3BNL8 230 aa9.55□□□□□ -0.88
LPP-217ENST00000487347 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
LPP-217ENST00000487347 SOX11P35716 441 aa9.55□□□□□ -0.88
LPP-217ENST00000487347 SYMPKQ92797 1274 aaKnown RBP9.55□□□□□ -0.88
LPP-217ENST00000487347 SEPT9Q9UHD8 586 aaPredicted RBP9.55□□□□□ -0.88
LPP-217ENST00000487347 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
LPP-217ENST00000487347 PSEN2P49810 448 aa9.54□□□□□ -0.88
LPP-217ENST00000487347 NR6A1Q15406 480 aa9.54□□□□□ -0.88
LPP-217ENST00000487347 SLF2Q8IX21 1173 aa9.54□□□□□ -0.88
LPP-217ENST00000487347 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
LPP-217ENST00000487347 SCUBE2Q9NQ36 999 aa9.54□□□□□ -0.88
LPP-217ENST00000487347 TMEM88BA6NKF7 163 aa9.53□□□□□ -0.88
LPP-217ENST00000487347 ATG7O95352 703 aa9.53□□□□□ -0.88
LPP-217ENST00000487347 MAFBQ9Y5Q3 323 aaPredicted RBP9.53□□□□□ -0.88
LPP-217ENST00000487347 CFHP08603 1231 aa9.52□□□□□ -0.89
LPP-217ENST00000487347 ATP6V1AP38606 617 aa9.52□□□□□ -0.89
LPP-217ENST00000487347 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.89
LPP-217ENST00000487347 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
LPP-217ENST00000487347 FAM98CQ17RN3 349 aaKnown RBP9.51□□□□□ -0.89
LPP-217ENST00000487347 FOXD4L5Q5VV16 416 aaPredicted RBP9.51□□□□□ -0.89
LPP-217ENST00000487347 MAMSTRQ6ZN01 415 aa9.51□□□□□ -0.89
LPP-217ENST00000487347 FOXD4L4Q8WXT5 416 aaPredicted RBP9.51□□□□□ -0.89
LPP-217ENST00000487347 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
LPP-217ENST00000487347 TBC1D9Q6ZT07 1266 aa9.5□□□□□ -0.89
LPP-217ENST00000487347 SNPHO15079 494 aa9.49□□□□□ -0.89
LPP-217ENST00000487347 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
LPP-217ENST00000487347 DESI1Q6ICB0 168 aa9.49□□□□□ -0.89
LPP-217ENST00000487347 SAMD7Q7Z3H4 446 aa9.49□□□□□ -0.89
LPP-217ENST00000487347 HDGFP51858 240 aaKnown RBP9.48□□□□□ -0.89
LPP-217ENST00000487347 CDCA8Q53HL2 280 aa9.48□□□□□ -0.89
LPP-217ENST00000487347 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
LPP-217ENST00000487347 RETREG3Q86VR2 466 aa9.48□□□□□ -0.89
LPP-217ENST00000487347 ZNF428Q96B54 188 aa9.48□□□□□ -0.89
LPP-217ENST00000487347 VRTNQ9H8Y1 702 aa9.48□□□□□ -0.89
LPP-217ENST00000487347 ARHGAP33O14559 1287 aa9.47□□□□□ -0.89
LPP-217ENST00000487347 MORN1Q5T089 497 aa9.47□□□□□ -0.89
LPP-217ENST00000487347 ATP9BO43861 1147 aa9.46□□□□□ -0.9
LPP-217ENST00000487347 IVNS1ABPQ9Y6Y0 642 aa9.46□□□□□ -0.9
LPP-217ENST00000487347 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
LPP-217ENST00000487347 NR1H3Q13133 447 aa9.45□□□□□ -0.9
LPP-217ENST00000487347 KANK4Q5T7N3 995 aaPredicted RBP9.45□□□□□ -0.9
LPP-217ENST00000487347 LYPD8Q6UX82 237 aa9.45□□□□□ -0.9
LPP-217ENST00000487347 LAPTM4BQ86VI4 370 aa9.45□□□□□ -0.9
LPP-217ENST00000487347 VPS9D1Q9Y2B5 631 aa9.45□□□□□ -0.9
LPP-217ENST00000487347 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
LPP-217ENST00000487347 SLC27A5Q9Y2P5 690 aa9.44□□□□□ -0.9
LPP-217ENST00000487347 FBXO45P0C2W1 286 aa9.43□□□□□ -0.9
LPP-217ENST00000487347 ELOAQ14241 798 aaKnown RBP9.43□□□□□ -0.9
LPP-217ENST00000487347 SND1Q7KZF4 910 aaKnown RBP eCLIP9.43□□□□□ -0.9
LPP-217ENST00000487347 PNMA1Q8ND90 353 aa9.43□□□□□ -0.9
LPP-217ENST00000487347 BHMG1C9JSJ3 638 aaPredicted RBP9.42□□□□□ -0.9
LPP-217ENST00000487347 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
LPP-217ENST00000487347 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
LPP-217ENST00000487347 GNEQ9Y223 722 aaKnown RBP9.42□□□□□ -0.9
LPP-217ENST00000487347 AXIN2Q9Y2T1 843 aa9.42□□□□□ -0.9
LPP-217ENST00000487347 RBM25P49756 843 aaKnown RBP9.41□□□□□ -0.9
LPP-217ENST00000487347 Q3C1V9 767 aa9.41□□□□□ -0.9
LPP-217ENST00000487347 PUS10Q3MIT2 529 aaKnown RBP9.41□□□□□ -0.9
LPP-217ENST00000487347 KMT5BQ4FZB7 885 aa9.41□□□□□ -0.9
LPP-217ENST00000487347 LHX8Q68G74 356 aa9.41□□□□□ -0.9
LPP-217ENST00000487347 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
LPP-217ENST00000487347 ZMIZ1Q9ULJ6 1067 aa9.41□□□□□ -0.9
LPP-217ENST00000487347 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
LPP-217ENST00000487347 ZBBXA8MT70 800 aa9.39□□□□□ -0.91
LPP-217ENST00000487347 F12P00748 615 aaPredicted RBP9.39□□□□□ -0.91
LPP-217ENST00000487347 CCDC27Q2M243 656 aa9.39□□□□□ -0.91
LPP-217ENST00000487347 BLOC1S3Q6QNY0 202 aa9.39□□□□□ -0.91
LPP-217ENST00000487347 ZFRQ96KR1 1074 aaKnown RBP9.39□□□□□ -0.91
LPP-217ENST00000487347 FKBPLQ9UIM3 349 aa9.39□□□□□ -0.91
LPP-217ENST00000487347 RNF40O75150 1001 aa9.38□□□□□ -0.91
LPP-217ENST00000487347 VARS2Q5ST30 1063 aaKnown RBP9.38□□□□□ -0.91
LPP-217ENST00000487347 STK32AQ8WU08 396 aa9.38□□□□□ -0.91
LPP-217ENST00000487347 PBX2P40425 430 aa9.37□□□□□ -0.91
LPP-217ENST00000487347 TMEM164Q5U3C3 297 aa9.37□□□□□ -0.91
LPP-217ENST00000487347 PHLDB3Q6NSJ2 640 aa9.37□□□□□ -0.91
LPP-217ENST00000487347 BRICD5Q6PL45 260 aa9.37□□□□□ -0.91
LPP-217ENST00000487347 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
LPP-217ENST00000487347 AMOTL2Q9Y2J4 779 aa9.37□□□□□ -0.91
LPP-217ENST00000487347 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms