RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 TULP4Q9NRJ4 1543 aa11□□□□□ -0.65
ZNF541-204ENST00000487275 CABP2Q9NPB3 220 aa11□□□□□ -0.65
ZNF541-204ENST00000487275 NCKAP5LQ9HCH0 1330 aa11□□□□□ -0.65
ZNF541-204ENST00000487275 ROBO2Q9HCK4 1378 aa11□□□□□ -0.65
ZNF541-204ENST00000487275 PTPRUQ92729 1446 aa11□□□□□ -0.65
ZNF541-204ENST00000487275 CCER2I3L3R5 266 aa10.99□□□□□ -0.65
ZNF541-204ENST00000487275 CNGB1Q14028 1251 aaPredicted RBP10.99□□□□□ -0.65
ZNF541-204ENST00000487275 TMC1Q8TDI8 760 aa10.99□□□□□ -0.65
ZNF541-204ENST00000487275 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
ZNF541-204ENST00000487275 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
ZNF541-204ENST00000487275 CDK19Q9BWU1 502 aa10.98□□□□□ -0.65
ZNF541-204ENST00000487275 PTCH1Q13635 1447 aa10.98□□□□□ -0.65
ZNF541-204ENST00000487275 KNSTRNQ9Y448 316 aa10.97□□□□□ -0.65
ZNF541-204ENST00000487275 MYOM1P52179 1685 aa10.96□□□□□ -0.65
ZNF541-204ENST00000487275 KTN1Q86UP2 1357 aaKnown RBP10.96□□□□□ -0.65
ZNF541-204ENST00000487275 NINLQ9Y2I6 1382 aa10.96□□□□□ -0.65
ZNF541-204ENST00000487275 WASLO00401 505 aaPredicted RBP10.96□□□□□ -0.65
ZNF541-204ENST00000487275 PER1O15534 1290 aaPredicted RBP10.96□□□□□ -0.65
ZNF541-204ENST00000487275 KCNA6P17658 529 aa10.95□□□□□ -0.66
ZNF541-204ENST00000487275 HSPA2P54652 639 aa10.95□□□□□ -0.66
ZNF541-204ENST00000487275 RALBP1Q15311 655 aa10.95□□□□□ -0.66
ZNF541-204ENST00000487275 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
ZNF541-204ENST00000487275 XRN1Q8IZH2 1706 aaKnown RBP10.95□□□□□ -0.66
ZNF541-204ENST00000487275 LMTK3Q96Q04 1460 aa10.94□□□□□ -0.66
ZNF541-204ENST00000487275 CC2D1BQ5T0F9 858 aaKnown RBP10.94□□□□□ -0.66
ZNF541-204ENST00000487275 ANKRD36BQ8N2N9 1353 aa10.93□□□□□ -0.66
ZNF541-204ENST00000487275 ADGRB2O60241 1585 aa10.92□□□□□ -0.66
ZNF541-204ENST00000487275 HDGFL2Q7Z4V5 671 aaPredicted RBP10.92□□□□□ -0.66
ZNF541-204ENST00000487275 TERF2IPQ9NYB0 399 aa10.92□□□□□ -0.66
ZNF541-204ENST00000487275 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
ZNF541-204ENST00000487275 CHD2O14647 1828 aaKnown RBP10.91□□□□□ -0.66
ZNF541-204ENST00000487275 MYBBP1AQ9BQG0 1328 aaKnown RBP10.91□□□□□ -0.66
ZNF541-204ENST00000487275 AMER1Q5JTC6 1135 aaPredicted RBP10.91□□□□□ -0.66
ZNF541-204ENST00000487275 NUDT16Q96DE0 195 aaKnown RBP10.91□□□□□ -0.66
ZNF541-204ENST00000487275 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
ZNF541-204ENST00000487275 CARD14Q9BXL6 1004 aa10.91□□□□□ -0.66
ZNF541-204ENST00000487275 CABP1Q9NZU7 370 aa10.91□□□□□ -0.66
ZNF541-204ENST00000487275 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.91□□□□□ -0.66
ZNF541-204ENST00000487275 PARD3Q8TEW0 1356 aa10.9□□□□□ -0.66
ZNF541-204ENST00000487275 NPC1L1Q9UHC9 1359 aa10.9□□□□□ -0.66
ZNF541-204ENST00000487275 MRS2Q9HD23 443 aa10.9□□□□□ -0.66
ZNF541-204ENST00000487275 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
ZNF541-204ENST00000487275 A0A1W2PP64 1363 aa10.9□□□□□ -0.67
ZNF541-204ENST00000487275 PPIP5K1Q6PFW1 1433 aa10.89□□□□□ -0.67
ZNF541-204ENST00000487275 NWD1Q149M9 1564 aa10.89□□□□□ -0.67
ZNF541-204ENST00000487275 CGNL1Q0VF96 1302 aa10.88□□□□□ -0.67
ZNF541-204ENST00000487275 ATP7BP35670 1465 aa10.88□□□□□ -0.67
ZNF541-204ENST00000487275 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
ZNF541-204ENST00000487275 PROSER2Q86WR7 435 aaPredicted RBP10.88□□□□□ -0.67
ZNF541-204ENST00000487275 PRR36Q9H6K5 1346 aa10.87□□□□□ -0.67
ZNF541-204ENST00000487275 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
ZNF541-204ENST00000487275 CCDC184Q52MB2 194 aa10.87□□□□□ -0.67
ZNF541-204ENST00000487275 NLRP13Q86W25 1043 aa10.87□□□□□ -0.67
ZNF541-204ENST00000487275 BRD4O60885 1362 aaPredicted RBP10.87□□□□□ -0.67
ZNF541-204ENST00000487275 NKTRP30414 1462 aaKnown RBP10.87□□□□□ -0.67
ZNF541-204ENST00000487275 CD163L1Q9NR16 1453 aa10.87□□□□□ -0.67
ZNF541-204ENST00000487275 RBM33Q96EV2 1170 aaKnown RBP10.86□□□□□ -0.67
ZNF541-204ENST00000487275 NSD2O96028 1365 aa10.86□□□□□ -0.67
ZNF541-204ENST00000487275 ANKARQ7Z5J8 1434 aa10.85□□□□□ -0.67
ZNF541-204ENST00000487275 ADGRL3Q9HAR2 1447 aa10.85□□□□□ -0.67
ZNF541-204ENST00000487275 USP32Q8NFA0 1604 aa10.85□□□□□ -0.67
ZNF541-204ENST00000487275 MORC1Q86VD1 984 aa10.85□□□□□ -0.67
ZNF541-204ENST00000487275 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
ZNF541-204ENST00000487275 CDC42BPGQ6DT37 1551 aa10.85□□□□□ -0.67
ZNF541-204ENST00000487275 PLEKHG3A1L390 1219 aa10.84□□□□□ -0.67
ZNF541-204ENST00000487275 PPP2R1AP30153 589 aa10.84□□□□□ -0.67
ZNF541-204ENST00000487275 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
ZNF541-204ENST00000487275 STRCQ7RTU9 1775 aa10.83□□□□□ -0.68
ZNF541-204ENST00000487275 CENPBP07199 599 aaPredicted RBP10.83□□□□□ -0.68
ZNF541-204ENST00000487275 FAM9BQ8IZU0 186 aa10.83□□□□□ -0.68
ZNF541-204ENST00000487275 DMRT2Q9Y5R5 561 aa10.83□□□□□ -0.68
ZNF541-204ENST00000487275 NALCNQ8IZF0 1738 aa10.83□□□□□ -0.68
ZNF541-204ENST00000487275 EDC4Q6P2E9 1401 aaKnown RBP10.83□□□□□ -0.68
ZNF541-204ENST00000487275 TOPAZ1Q8N9V7 1692 aa10.82□□□□□ -0.68
ZNF541-204ENST00000487275 FMN2Q9NZ56 1722 aa10.82□□□□□ -0.68
ZNF541-204ENST00000487275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.82□□□□□ -0.68
ZNF541-204ENST00000487275 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
ZNF541-204ENST00000487275 ACEP12821 1306 aa10.82□□□□□ -0.68
ZNF541-204ENST00000487275 ITSN1Q15811 1721 aa10.81□□□□□ -0.68
ZNF541-204ENST00000487275 TMEM94Q12767 1356 aa10.81□□□□□ -0.68
ZNF541-204ENST00000487275 PMFBP1Q8TBY8 1022 aa10.81□□□□□ -0.68
ZNF541-204ENST00000487275 GGNBP2Q9H3C7 697 aa10.81□□□□□ -0.68
ZNF541-204ENST00000487275 C19orf44Q9H6X5 657 aa10.81□□□□□ -0.68
ZNF541-204ENST00000487275 NCOA3Q9Y6Q9 1424 aa10.81□□□□□ -0.68
ZNF541-204ENST00000487275 FYB1O15117 783 aa10.8□□□□□ -0.68
ZNF541-204ENST00000487275 TNNT2P45379 298 aaPredicted RBP10.8□□□□□ -0.68
ZNF541-204ENST00000487275 USP6P35125 1406 aa10.79□□□□□ -0.68
ZNF541-204ENST00000487275 ATF3P18847 181 aa10.79□□□□□ -0.68
ZNF541-204ENST00000487275 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
ZNF541-204ENST00000487275 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
ZNF541-204ENST00000487275 AKAP12Q02952 1782 aa10.79□□□□□ -0.68
ZNF541-204ENST00000487275 TTC21BQ7Z4L5 1316 aa10.79□□□□□ -0.68
ZNF541-204ENST00000487275 ZNF335Q9H4Z2 1342 aaPredicted RBP10.79□□□□□ -0.68
ZNF541-204ENST00000487275 POLR3AO14802 1390 aaPredicted RBP10.78□□□□□ -0.68
ZNF541-204ENST00000487275 MON2Q7Z3U7 1717 aa10.78□□□□□ -0.68
ZNF541-204ENST00000487275 STRCP1A6NGW2 1772 aa10.78□□□□□ -0.68
ZNF541-204ENST00000487275 ESCO1Q5FWF5 840 aa10.78□□□□□ -0.68
ZNF541-204ENST00000487275 MSH6P52701 1360 aa10.77□□□□□ -0.68
ZNF541-204ENST00000487275 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.68
ZNF541-204ENST00000487275 DCCP43146 1447 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms