RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
TRIM56-204ENST00000487252 PXDNQ92626 1479 aa18.59■□□□□ 0.57
TRIM56-204ENST00000487252 CHGAP10645 457 aaKnown RBP18.59■□□□□ 0.57
TRIM56-204ENST00000487252 IQGAP3Q86VI3 1631 aa18.58■□□□□ 0.56
TRIM56-204ENST00000487252 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
TRIM56-204ENST00000487252 KANK4Q5T7N3 995 aaPredicted RBP18.56■□□□□ 0.56
TRIM56-204ENST00000487252 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
TRIM56-204ENST00000487252 E9PCH4 1651 aa18.56■□□□□ 0.56
TRIM56-204ENST00000487252 DISP2A7MBM2 1401 aa18.55■□□□□ 0.56
TRIM56-204ENST00000487252 ADGRL2O95490 1459 aa18.54■□□□□ 0.56
TRIM56-204ENST00000487252 NPHP3Q7Z494 1330 aa18.53■□□□□ 0.56
TRIM56-204ENST00000487252 RGPD1P0DJD0 1748 aa18.52■□□□□ 0.56
TRIM56-204ENST00000487252 EN1Q05925 392 aaPredicted RBP18.52■□□□□ 0.56
TRIM56-204ENST00000487252 VPS72Q15906 364 aa18.52■□□□□ 0.56
TRIM56-204ENST00000487252 CHIC2Q9UKJ5 165 aa18.51■□□□□ 0.55
TRIM56-204ENST00000487252 PRAG1Q86YV5 1406 aa18.5■□□□□ 0.55
TRIM56-204ENST00000487252 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
TRIM56-204ENST00000487252 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
TRIM56-204ENST00000487252 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
TRIM56-204ENST00000487252 TNS1Q9HBL0 1735 aaKnown RBP18.48■□□□□ 0.55
TRIM56-204ENST00000487252 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
TRIM56-204ENST00000487252 PLCH1Q4KWH8 1693 aa18.45■□□□□ 0.54
TRIM56-204ENST00000487252 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
TRIM56-204ENST00000487252 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
TRIM56-204ENST00000487252 FOXO3O43524 673 aa18.43■□□□□ 0.54
TRIM56-204ENST00000487252 ZNF784Q8NCA9 323 aaPredicted RBP18.43■□□□□ 0.54
TRIM56-204ENST00000487252 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
TRIM56-204ENST00000487252 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
TRIM56-204ENST00000487252 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
TRIM56-204ENST00000487252 UTRNP46939 3433 aa18.42■□□□□ 0.54
TRIM56-204ENST00000487252 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
TRIM56-204ENST00000487252 NEXMIFQ5QGS0 1516 aa18.41■□□□□ 0.54
TRIM56-204ENST00000487252 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
TRIM56-204ENST00000487252 SPATA31A3Q5VYP0 1347 aa18.41■□□□□ 0.54
TRIM56-204ENST00000487252 LRPPRCP42704 1394 aaKnown RBP18.41■□□□□ 0.54
TRIM56-204ENST00000487252 EZH2Q15910 746 aaKnown RBP18.4■□□□□ 0.54
TRIM56-204ENST00000487252 HFM1A2PYH4 1435 aa18.4■□□□□ 0.54
TRIM56-204ENST00000487252 C1QTNF8P60827 252 aa18.38■□□□□ 0.53
TRIM56-204ENST00000487252 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
TRIM56-204ENST00000487252 CEP350Q5VT06 3117 aa18.37■□□□□ 0.53
TRIM56-204ENST00000487252 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
TRIM56-204ENST00000487252 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
TRIM56-204ENST00000487252 RREB1Q92766 1687 aa18.37■□□□□ 0.53
TRIM56-204ENST00000487252 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
TRIM56-204ENST00000487252 NRAPQ86VF7 1730 aa18.36■□□□□ 0.53
TRIM56-204ENST00000487252 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
TRIM56-204ENST00000487252 ABCA3Q99758 1704 aa18.35■□□□□ 0.53
TRIM56-204ENST00000487252 FAM98CQ17RN3 349 aaKnown RBP18.34■□□□□ 0.53
TRIM56-204ENST00000487252 NUP188Q5SRE5 1749 aa18.33■□□□□ 0.52
TRIM56-204ENST00000487252 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
TRIM56-204ENST00000487252 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.52
TRIM56-204ENST00000487252 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
TRIM56-204ENST00000487252 SPON1Q9HCB6 807 aa18.32■□□□□ 0.52
TRIM56-204ENST00000487252 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
TRIM56-204ENST00000487252 KCNQ2O43526 872 aa18.3■□□□□ 0.52
TRIM56-204ENST00000487252 KIF1AQ12756 1690 aa18.3■□□□□ 0.52
TRIM56-204ENST00000487252 A0A0G2JS52 829 aa18.29■□□□□ 0.52
TRIM56-204ENST00000487252 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
TRIM56-204ENST00000487252 MYT1Q01538 1121 aa18.29■□□□□ 0.52
TRIM56-204ENST00000487252 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
TRIM56-204ENST00000487252 CABLES1Q8TDN4 633 aa18.28■□□□□ 0.52
TRIM56-204ENST00000487252 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
TRIM56-204ENST00000487252 NAIPQ13075 1403 aa18.27■□□□□ 0.52
TRIM56-204ENST00000487252 CHD4Q14839 1912 aa18.25■□□□□ 0.51
TRIM56-204ENST00000487252 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
TRIM56-204ENST00000487252 SPATA31A5Q5VU36 1347 aa18.24■□□□□ 0.51
TRIM56-204ENST00000487252 SPATA31A7Q8IWB4 1347 aa18.24■□□□□ 0.51
TRIM56-204ENST00000487252 CLTCL1P53675 1640 aa18.24■□□□□ 0.51
TRIM56-204ENST00000487252 TRIM37O94972 964 aa18.24■□□□□ 0.51
TRIM56-204ENST00000487252 FMN2Q9NZ56 1722 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 NUP155O75694 1391 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
TRIM56-204ENST00000487252 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 FAM196AQ6ZSG2 479 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
TRIM56-204ENST00000487252 APBA3O96018 575 aa18.22■□□□□ 0.51
TRIM56-204ENST00000487252 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
TRIM56-204ENST00000487252 COL14A1Q05707 1796 aaKnown RBP18.21■□□□□ 0.51
TRIM56-204ENST00000487252 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
TRIM56-204ENST00000487252 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
TRIM56-204ENST00000487252 TECPR2O15040 1411 aa18.2■□□□□ 0.5
TRIM56-204ENST00000487252 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
TRIM56-204ENST00000487252 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
TRIM56-204ENST00000487252 KIF1BO60333 1816 aa18.19■□□□□ 0.5
TRIM56-204ENST00000487252 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
TRIM56-204ENST00000487252 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
TRIM56-204ENST00000487252 PSME1Q06323 249 aa18.17■□□□□ 0.5
TRIM56-204ENST00000487252 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
TRIM56-204ENST00000487252 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
TRIM56-204ENST00000487252 RGPD8O14715 1765 aaPredicted RBP18.15■□□□□ 0.5
TRIM56-204ENST00000487252 MYOM1P52179 1685 aa18.15■□□□□ 0.5
TRIM56-204ENST00000487252 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
TRIM56-204ENST00000487252 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
TRIM56-204ENST00000487252 SPATA31A1Q5TZJ5 1347 aa18.12■□□□□ 0.49
TRIM56-204ENST00000487252 PPLO60437 1756 aa18.12■□□□□ 0.49
TRIM56-204ENST00000487252 PTGER2P43116 358 aa18.11■□□□□ 0.49
TRIM56-204ENST00000487252 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
TRIM56-204ENST00000487252 RPGRIP1LQ68CZ1 1315 aa18.11■□□□□ 0.49
TRIM56-204ENST00000487252 PLEKHH1Q9ULM0 1364 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms