RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 B4GALNT3Q6L9W6 998 aa30.18■■■□□ 2.42
LRRC1-203ENST00000487251 YTHDC2Q9H6S0 1430 aaKnown RBP30.17■■■□□ 2.42
LRRC1-203ENST00000487251 TNNT2P45379 298 aaPredicted RBP30.15■■■□□ 2.42
LRRC1-203ENST00000487251 PRAM1Q96QH2 718 aa30.15■■■□□ 2.42
LRRC1-203ENST00000487251 MINK1Q8N4C8 1332 aaPredicted RBP30.15■■■□□ 2.42
LRRC1-203ENST00000487251 ZMYM3Q14202 1370 aa30.14■■■□□ 2.42
LRRC1-203ENST00000487251 PDE3BQ13370 1112 aa30.13■■■□□ 2.41
LRRC1-203ENST00000487251 RIMS2Q9UQ26 1411 aa30.13■■■□□ 2.41
LRRC1-203ENST00000487251 ESF1Q9H501 851 aaKnown RBP30.13■■■□□ 2.41
LRRC1-203ENST00000487251 CCDC146Q8IYE0 955 aa30.12■■■□□ 2.41
LRRC1-203ENST00000487251 PLEKHH1Q9ULM0 1364 aa30.11■■■□□ 2.41
LRRC1-203ENST00000487251 MORC1Q86VD1 984 aa30.1■■■□□ 2.41
LRRC1-203ENST00000487251 FANCIQ9NVI1 1328 aa30.1■■■□□ 2.41
LRRC1-203ENST00000487251 SRPK2P78362 688 aaKnown RBP30.1■■■□□ 2.41
LRRC1-203ENST00000487251 POGKQ9P215 609 aa30.1■■■□□ 2.41
LRRC1-203ENST00000487251 RCAN3Q9UKA8 241 aa30.09■■■□□ 2.41
LRRC1-203ENST00000487251 SETD1AO15047 1707 aaKnown RBP30.08■■■□□ 2.41
LRRC1-203ENST00000487251 USP32Q8NFA0 1604 aa30.07■■■□□ 2.41
LRRC1-203ENST00000487251 ANKRD36BQ8N2N9 1353 aa30.06■■■□□ 2.4
LRRC1-203ENST00000487251 PUS7Q96PZ0 661 aaKnown RBP30.05■■■□□ 2.4
LRRC1-203ENST00000487251 RRP1P56182 461 aaKnown RBP30.03■■■□□ 2.4
LRRC1-203ENST00000487251 CGNL1Q0VF96 1302 aa30.03■■■□□ 2.4
LRRC1-203ENST00000487251 NRXN3Q9Y4C0 1643 aa30.02■■■□□ 2.4
LRRC1-203ENST00000487251 A0A1W2PP64 1363 aa30.02■■■□□ 2.4
LRRC1-203ENST00000487251 SHPRHQ149N8 1683 aa30.01■■■□□ 2.39
LRRC1-203ENST00000487251 WAPLQ7Z5K2 1190 aa30.01■■■□□ 2.39
LRRC1-203ENST00000487251 POLR3AO14802 1390 aaPredicted RBP29.99■■■□□ 2.39
LRRC1-203ENST00000487251 APAF1O14727 1248 aa29.98■■■□□ 2.39
LRRC1-203ENST00000487251 ZNF521Q96K83 1311 aa29.97■■■□□ 2.39
LRRC1-203ENST00000487251 TNRQ92752 1358 aa29.97■■■□□ 2.39
LRRC1-203ENST00000487251 CDK19Q9BWU1 502 aa29.96■■■□□ 2.39
LRRC1-203ENST00000487251 MTHFSP49914 203 aa29.94■■■□□ 2.38
LRRC1-203ENST00000487251 CD163L1Q9NR16 1453 aa29.94■■■□□ 2.38
LRRC1-203ENST00000487251 METP08581 1390 aa29.93■■■□□ 2.38
LRRC1-203ENST00000487251 ATAD2Q6PL18 1390 aa29.93■■■□□ 2.38
LRRC1-203ENST00000487251 UBR1Q8IWV7 1749 aa29.93■■■□□ 2.38
LRRC1-203ENST00000487251 PLIN1O60240 522 aa29.92■■■□□ 2.38
LRRC1-203ENST00000487251 CEBPAP49715 358 aaPredicted RBP29.91■■■□□ 2.38
LRRC1-203ENST00000487251 DUSP27Q5VZP5 1158 aa29.91■■■□□ 2.38
LRRC1-203ENST00000487251 GGNBP2Q9H3C7 697 aa29.91■■■□□ 2.38
LRRC1-203ENST00000487251 EXOC6Q8TAG9 804 aa29.9■■■□□ 2.38
LRRC1-203ENST00000487251 ABCC11Q96J66 1382 aa29.9■■■□□ 2.38
LRRC1-203ENST00000487251 DLC1Q96QB1 1528 aa29.9■■■□□ 2.38
LRRC1-203ENST00000487251 GOLGA2Q08379 1002 aa29.9■■■□□ 2.38
LRRC1-203ENST00000487251 ERICH6Q7L0X2 663 aa29.9■■■□□ 2.38
LRRC1-203ENST00000487251 CCDC136Q96JN2 1154 aa29.9■■■□□ 2.38
LRRC1-203ENST00000487251 NINLQ9Y2I6 1382 aa29.9■■■□□ 2.38
LRRC1-203ENST00000487251 SPINK5Q9NQ38 1064 aaPredicted RBP29.89■■■□□ 2.38
LRRC1-203ENST00000487251 PLPPR3Q6T4P5 718 aa29.88■■■□□ 2.37
LRRC1-203ENST00000487251 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.88■■■□□ 2.37
LRRC1-203ENST00000487251 CABP1Q9NZU7 370 aa29.88■■■□□ 2.37
LRRC1-203ENST00000487251 NSD2O96028 1365 aa29.87■■■□□ 2.37
LRRC1-203ENST00000487251 TXNDC2Q86VQ3 553 aa29.86■■■□□ 2.37
LRRC1-203ENST00000487251 DMRT2Q9Y5R5 561 aa29.86■■■□□ 2.37
LRRC1-203ENST00000487251 TERF2IPQ9NYB0 399 aa29.85■■■□□ 2.37
LRRC1-203ENST00000487251 SLFN5Q08AF3 891 aa29.84■■■□□ 2.37
LRRC1-203ENST00000487251 ANKRD26Q9UPS8 1709 aa29.83■■■□□ 2.37
LRRC1-203ENST00000487251 FYB1O15117 783 aa29.83■■■□□ 2.37
LRRC1-203ENST00000487251 TMEM2Q9UHN6 1383 aa29.83■■■□□ 2.37
LRRC1-203ENST00000487251 NLRP1Q9C000 1473 aa29.8■■■□□ 2.36
LRRC1-203ENST00000487251 TRHP20396 242 aaPredicted RBP29.8■■■□□ 2.36
LRRC1-203ENST00000487251 RRP7AQ9Y3A4 280 aaKnown RBP29.8■■■□□ 2.36
LRRC1-203ENST00000487251 NEUROD2Q15784 382 aa29.79■■■□□ 2.36
LRRC1-203ENST00000487251 C3P01024 1663 aa29.79■■■□□ 2.36
LRRC1-203ENST00000487251 HDGFL2Q7Z4V5 671 aaPredicted RBP29.79■■■□□ 2.36
LRRC1-203ENST00000487251 CFAP53Q96M91 514 aa29.79■■■□□ 2.36
LRRC1-203ENST00000487251 KIF20BQ96Q89 1820 aa29.78■■■□□ 2.36
LRRC1-203ENST00000487251 LTKP29376 864 aa29.77■■■□□ 2.36
LRRC1-203ENST00000487251 TRMT2AQ8IZ69 625 aaKnown RBP29.77■■■□□ 2.36
LRRC1-203ENST00000487251 KNDC1Q76NI1 1749 aa29.76■■■□□ 2.36
LRRC1-203ENST00000487251 C20orf194Q5TEA3 1177 aa29.76■■■□□ 2.35
LRRC1-203ENST00000487251 HDGFP51858 240 aaKnown RBP29.75■■■□□ 2.35
LRRC1-203ENST00000487251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.75■■■□□ 2.351e-6■■□□□ 11.8
LRRC1-203ENST00000487251 RUNDC1Q96C34 613 aa29.75■■■□□ 2.35
LRRC1-203ENST00000487251 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
LRRC1-203ENST00000487251 NCKAP5LQ9HCH0 1330 aa29.74■■■□□ 2.35
LRRC1-203ENST00000487251 WASLO00401 505 aaPredicted RBP29.73■■■□□ 2.35
LRRC1-203ENST00000487251 WWC1Q8IX03 1113 aa29.73■■■□□ 2.35
LRRC1-203ENST00000487251 TCP11L2Q8N4U5 519 aa29.73■■■□□ 2.35
LRRC1-203ENST00000487251 IQSEC2Q5JU85 1478 aa29.73■■■□□ 2.35
LRRC1-203ENST00000487251 CRBNQ96SW2 442 aa29.73■■■□□ 2.35
LRRC1-203ENST00000487251 ADAMTS13Q76LX8 1427 aa29.72■■■□□ 2.35
LRRC1-203ENST00000487251 U2AF1L5P0DN76 240 aaPredicted RBP29.71■■■□□ 2.35
LRRC1-203ENST00000487251 U2AF1Q01081 240 aaKnown RBP eCLIP29.71■■■□□ 2.35
LRRC1-203ENST00000487251 FBLN1P23142 703 aa29.7■■■□□ 2.35
LRRC1-203ENST00000487251 CPS1P31327 1500 aa29.7■■■□□ 2.34
LRRC1-203ENST00000487251 MED14O60244 1454 aa29.69■■■□□ 2.34
LRRC1-203ENST00000487251 PPIP5K1Q6PFW1 1433 aa29.69■■■□□ 2.34
LRRC1-203ENST00000487251 E9PSI1 815 aa29.69■■■□□ 2.34
LRRC1-203ENST00000487251 NKTRP30414 1462 aaKnown RBP29.69■■■□□ 2.34
LRRC1-203ENST00000487251 TECPR2O15040 1411 aa29.68■■■□□ 2.34
LRRC1-203ENST00000487251 ATP7BP35670 1465 aa29.68■■■□□ 2.34
LRRC1-203ENST00000487251 COL3A1P02461 1466 aaPredicted RBP29.68■■■□□ 2.34
LRRC1-203ENST00000487251 ROBO2Q9HCK4 1378 aa29.68■■■□□ 2.34
LRRC1-203ENST00000487251 FAM135BQ49AJ0 1406 aa29.66■■■□□ 2.34
LRRC1-203ENST00000487251 U2SURPO15042 1029 aaKnown RBP29.66■■■□□ 2.34
LRRC1-203ENST00000487251 SLC26A8Q96RN1 970 aa29.66■■■□□ 2.34
LRRC1-203ENST00000487251 NUDT16Q96DE0 195 aaKnown RBP29.65■■■□□ 2.34
LRRC1-203ENST00000487251 NGEFQ8N5V2 710 aa29.64■■■□□ 2.34
LRRC1-203ENST00000487251 PLEKHG1Q9ULL1 1385 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms