RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
VTI1BP1-201ENST00000486325 QRICH2Q9H0J4 1663 aa18.29■□□□□ 0.52
VTI1BP1-201ENST00000486325 PTCH1Q13635 1447 aa18.29■□□□□ 0.52
VTI1BP1-201ENST00000486325 ROBO2Q9HCK4 1378 aa18.29■□□□□ 0.52
VTI1BP1-201ENST00000486325 CDK19Q9BWU1 502 aa18.26■□□□□ 0.51
VTI1BP1-201ENST00000486325 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
VTI1BP1-201ENST00000486325 CHD2O14647 1828 aaKnown RBP18.26■□□□□ 0.51
VTI1BP1-201ENST00000486325 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
VTI1BP1-201ENST00000486325 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
VTI1BP1-201ENST00000486325 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
VTI1BP1-201ENST00000486325 ANP32CO43423 234 aa18.22■□□□□ 0.51
VTI1BP1-201ENST00000486325 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
VTI1BP1-201ENST00000486325 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
VTI1BP1-201ENST00000486325 NINLQ9Y2I6 1382 aa18.21■□□□□ 0.51
VTI1BP1-201ENST00000486325 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
VTI1BP1-201ENST00000486325 PANK3Q9H999 370 aa18.21■□□□□ 0.51
VTI1BP1-201ENST00000486325 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
VTI1BP1-201ENST00000486325 TULP4Q9NRJ4 1543 aa18.19■□□□□ 0.5
VTI1BP1-201ENST00000486325 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
VTI1BP1-201ENST00000486325 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
VTI1BP1-201ENST00000486325 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
VTI1BP1-201ENST00000486325 NWD1Q149M9 1564 aa18.17■□□□□ 0.5
VTI1BP1-201ENST00000486325 NCOA3Q9Y6Q9 1424 aa18.16■□□□□ 0.5
VTI1BP1-201ENST00000486325 NKTRP30414 1462 aaKnown RBP18.16■□□□□ 0.5
VTI1BP1-201ENST00000486325 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
VTI1BP1-201ENST00000486325 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
VTI1BP1-201ENST00000486325 SLC12A5Q9H2X9 1139 aa18.16■□□□□ 0.5
VTI1BP1-201ENST00000486325 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
VTI1BP1-201ENST00000486325 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
VTI1BP1-201ENST00000486325 MIER1Q8N108 512 aa18.15■□□□□ 0.5
VTI1BP1-201ENST00000486325 ADGRB2O60241 1585 aa18.15■□□□□ 0.5
VTI1BP1-201ENST00000486325 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
VTI1BP1-201ENST00000486325 HDGFL2Q7Z4V5 671 aaPredicted RBP18.13■□□□□ 0.49
VTI1BP1-201ENST00000486325 CABP1Q9NZU7 370 aa18.13■□□□□ 0.49
VTI1BP1-201ENST00000486325 C19orf44Q9H6X5 657 aa18.12■□□□□ 0.49
VTI1BP1-201ENST00000486325 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
VTI1BP1-201ENST00000486325 KTN1Q86UP2 1357 aaKnown RBP18.11■□□□□ 0.49
VTI1BP1-201ENST00000486325 ANKRD36BQ8N2N9 1353 aa18.11■□□□□ 0.49
VTI1BP1-201ENST00000486325 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
VTI1BP1-201ENST00000486325 PRKRIP1Q9H875 184 aaPredicted RBP18.1■□□□□ 0.49
VTI1BP1-201ENST00000486325 PLEKHG3A1L390 1219 aa18.09■□□□□ 0.49
VTI1BP1-201ENST00000486325 RALBP1Q15311 655 aa18.09■□□□□ 0.49
VTI1BP1-201ENST00000486325 ANKARQ7Z5J8 1434 aa18.08■□□□□ 0.49
VTI1BP1-201ENST00000486325 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.49
VTI1BP1-201ENST00000486325 TMEM94Q12767 1356 aa18.07■□□□□ 0.48
VTI1BP1-201ENST00000486325 MYOM1P52179 1685 aa18.07■□□□□ 0.48
VTI1BP1-201ENST00000486325 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
VTI1BP1-201ENST00000486325 RBM33Q96EV2 1170 aaKnown RBP18.07■□□□□ 0.48
VTI1BP1-201ENST00000486325 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
VTI1BP1-201ENST00000486325 PPIP5K1Q6PFW1 1433 aa18.06■□□□□ 0.48
VTI1BP1-201ENST00000486325 PRR36Q9H6K5 1346 aa18.06■□□□□ 0.48
VTI1BP1-201ENST00000486325 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
VTI1BP1-201ENST00000486325 ZNF335Q9H4Z2 1342 aaPredicted RBP18.05■□□□□ 0.48
VTI1BP1-201ENST00000486325 ATF3P18847 181 aa18.05■□□□□ 0.48
VTI1BP1-201ENST00000486325 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
VTI1BP1-201ENST00000486325 ATP7BP35670 1465 aa18.05■□□□□ 0.48
VTI1BP1-201ENST00000486325 CDC42BPGQ6DT37 1551 aa18.04■□□□□ 0.48
VTI1BP1-201ENST00000486325 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
VTI1BP1-201ENST00000486325 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
VTI1BP1-201ENST00000486325 A0A1W2PP64 1363 aa18.03■□□□□ 0.48
VTI1BP1-201ENST00000486325 DCCP43146 1447 aa18.02■□□□□ 0.48
VTI1BP1-201ENST00000486325 CPSF1Q10570 1443 aaKnown RBP18.02■□□□□ 0.48
VTI1BP1-201ENST00000486325 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
VTI1BP1-201ENST00000486325 MSH6P52701 1360 aa18.02■□□□□ 0.47
VTI1BP1-201ENST00000486325 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.47
VTI1BP1-201ENST00000486325 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
VTI1BP1-201ENST00000486325 NGDNQ8NEJ9 315 aaKnown RBP18.01■□□□□ 0.47
VTI1BP1-201ENST00000486325 ACEP12821 1306 aa18■□□□□ 0.47
VTI1BP1-201ENST00000486325 NSD2O96028 1365 aa18■□□□□ 0.47
VTI1BP1-201ENST00000486325 NALCNQ8IZF0 1738 aa18■□□□□ 0.47
VTI1BP1-201ENST00000486325 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
VTI1BP1-201ENST00000486325 CD163L1Q9NR16 1453 aa18■□□□□ 0.47
VTI1BP1-201ENST00000486325 LRRC7Q96NW7 1537 aa17.99■□□□□ 0.47
VTI1BP1-201ENST00000486325 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
VTI1BP1-201ENST00000486325 PHF8Q9UPP1 1060 aa17.99■□□□□ 0.47
VTI1BP1-201ENST00000486325 ESCO1Q5FWF5 840 aa17.98■□□□□ 0.47
VTI1BP1-201ENST00000486325 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
VTI1BP1-201ENST00000486325 ITSN1Q15811 1721 aa17.98■□□□□ 0.47
VTI1BP1-201ENST00000486325 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
VTI1BP1-201ENST00000486325 POLR3AO14802 1390 aaPredicted RBP17.97■□□□□ 0.47
VTI1BP1-201ENST00000486325 PMFBP1Q8TBY8 1022 aa17.97■□□□□ 0.47
VTI1BP1-201ENST00000486325 EDC4Q6P2E9 1401 aaKnown RBP17.97■□□□□ 0.47
VTI1BP1-201ENST00000486325 BRD4O60885 1362 aaPredicted RBP17.96■□□□□ 0.47
VTI1BP1-201ENST00000486325 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
VTI1BP1-201ENST00000486325 USP32Q8NFA0 1604 aa17.95■□□□□ 0.46
VTI1BP1-201ENST00000486325 FYB1O15117 783 aa17.95■□□□□ 0.46
VTI1BP1-201ENST00000486325 TOPAZ1Q8N9V7 1692 aa17.95■□□□□ 0.46
VTI1BP1-201ENST00000486325 NLRP13Q86W25 1043 aa17.94■□□□□ 0.46
VTI1BP1-201ENST00000486325 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
VTI1BP1-201ENST00000486325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.46
VTI1BP1-201ENST00000486325 C1orf167Q5SNV9 1468 aa17.93■□□□□ 0.46
VTI1BP1-201ENST00000486325 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
VTI1BP1-201ENST00000486325 PSME1Q06323 249 aa17.92■□□□□ 0.46
VTI1BP1-201ENST00000486325 RGPD8O14715 1765 aaPredicted RBP17.91■□□□□ 0.46
VTI1BP1-201ENST00000486325 USP6P35125 1406 aa17.91■□□□□ 0.46
VTI1BP1-201ENST00000486325 ORAI2Q96SN7 254 aa17.91■□□□□ 0.46
VTI1BP1-201ENST00000486325 SLAIN2Q9P270 581 aa17.91■□□□□ 0.46
VTI1BP1-201ENST00000486325 MST1RQ04912 1400 aa17.9■□□□□ 0.46
VTI1BP1-201ENST00000486325 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
VTI1BP1-201ENST00000486325 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms