RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 SOS2Q07890 1332 aaPredicted RBP33.2■■■□□ 2.91
SREBF1-214ENST00000486311 TMEM132EQ6IEE7 984 aa33.19■■■□□ 2.9
SREBF1-214ENST00000486311 LAMC1P11047 1609 aa33.19■■■□□ 2.9
SREBF1-214ENST00000486311 CDC42BPGQ6DT37 1551 aa33.17■■■□□ 2.9
SREBF1-214ENST00000486311 WAPLQ7Z5K2 1190 aa33.17■■■□□ 2.9
SREBF1-214ENST00000486311 AFF2P51816 1311 aa33.13■■■□□ 2.89
SREBF1-214ENST00000486311 C14orf93Q9H972 538 aaKnown RBP33.13■■■□□ 2.89
SREBF1-214ENST00000486311 NRXN1Q9ULB1 1477 aa33.12■■■□□ 2.89
SREBF1-214ENST00000486311 YTHDC2Q9H6S0 1430 aaKnown RBP33.12■■■□□ 2.89
SREBF1-214ENST00000486311 PLEKHH1Q9ULM0 1364 aa33.11■■■□□ 2.89
SREBF1-214ENST00000486311 ESCO1Q5FWF5 840 aa33.11■■■□□ 2.89
SREBF1-214ENST00000486311 MYOM2P54296 1465 aa33.11■■■□□ 2.89
SREBF1-214ENST00000486311 SIRT1Q96EB6 747 aa33.1■■■□□ 2.89
SREBF1-214ENST00000486311 RXRBP28702 533 aa33.09■■■□□ 2.89
SREBF1-214ENST00000486311 C8orf37Q96NL8 207 aa33.08■■■□□ 2.89
SREBF1-214ENST00000486311 KNDC1Q76NI1 1749 aa33.08■■■□□ 2.89
SREBF1-214ENST00000486311 NPHP3Q7Z494 1330 aa33.07■■■□□ 2.88
SREBF1-214ENST00000486311 CFAP70Q5T0N1 1121 aa33.06■■■□□ 2.88
SREBF1-214ENST00000486311 HRCP23327 699 aa33.03■■■□□ 2.88
SREBF1-214ENST00000486311 DHX57Q6P158 1386 aaKnown RBP33.03■■■□□ 2.88
SREBF1-214ENST00000486311 ADAMTS2O95450 1211 aa33.02■■■□□ 2.88
SREBF1-214ENST00000486311 NUTM2FA1L443 756 aa33.01■■■□□ 2.87
SREBF1-214ENST00000486311 PXDNQ92626 1479 aa33■■■□□ 2.87
SREBF1-214ENST00000486311 CDK12Q9NYV4 1490 aaPredicted RBP33■■■□□ 2.87
SREBF1-214ENST00000486311 FOXO3O43524 673 aa33■■■□□ 2.87
SREBF1-214ENST00000486311 NGLY1Q96IV0 654 aa32.99■■■□□ 2.87
SREBF1-214ENST00000486311 QTRT2Q9H974 415 aaKnown RBP32.97■■■□□ 2.87
SREBF1-214ENST00000486311 XPCQ01831 940 aaPredicted RBP32.95■■■□□ 2.87
SREBF1-214ENST00000486311 UPF1Q92900 1129 aaKnown RBP eCLIP32.95■■■□□ 2.87
SREBF1-214ENST00000486311 COL22A1Q8NFW1 1626 aaPredicted RBP32.95■■■□□ 2.86
SREBF1-214ENST00000486311 RBM6P78332 1123 aaKnown RBP32.94■■■□□ 2.86
SREBF1-214ENST00000486311 PRAM1Q96QH2 718 aa32.93■■■□□ 2.86
SREBF1-214ENST00000486311 FMN2Q9NZ56 1722 aa32.92■■■□□ 2.86
SREBF1-214ENST00000486311 FNBP4Q8N3X1 1017 aaPredicted RBP32.9■■■□□ 2.86
SREBF1-214ENST00000486311 DLC1Q96QB1 1528 aa32.89■■■□□ 2.86
SREBF1-214ENST00000486311 STAC3Q96MF2 364 aa32.88■■■□□ 2.85
SREBF1-214ENST00000486311 USP21Q9UK80 565 aa32.88■■■□□ 2.85
SREBF1-214ENST00000486311 ADGRB1O14514 1584 aa32.87■■■□□ 2.85
SREBF1-214ENST00000486311 SAFB2Q14151 953 aaKnown RBP eCLIP32.87■■■□□ 2.85
SREBF1-214ENST00000486311 DCAF11Q8TEB1 546 aa32.87■■■□□ 2.85
SREBF1-214ENST00000486311 RGS12O14924 1447 aa32.86■■■□□ 2.85
SREBF1-214ENST00000486311 POGKQ9P215 609 aa32.86■■■□□ 2.85
SREBF1-214ENST00000486311 KDM2AQ9Y2K7 1162 aa32.86■■■□□ 2.85
SREBF1-214ENST00000486311 KIF1AQ12756 1690 aa32.85■■■□□ 2.85
SREBF1-214ENST00000486311 SPATA31A3Q5VYP0 1347 aa32.84■■■□□ 2.85
SREBF1-214ENST00000486311 PHF8Q9UPP1 1060 aa32.84■■■□□ 2.85
SREBF1-214ENST00000486311 KRT28Q7Z3Y7 464 aa32.83■■■□□ 2.85
SREBF1-214ENST00000486311 TRPC5Q9UL62 973 aaPredicted RBP32.83■■■□□ 2.85
SREBF1-214ENST00000486311 TRAK1Q9UPV9 953 aa32.81■■■□□ 2.84
SREBF1-214ENST00000486311 ATRNO75882 1429 aa32.78■■■□□ 2.84
SREBF1-214ENST00000486311 ANKARQ7Z5J8 1434 aa32.77■■■□□ 2.84
SREBF1-214ENST00000486311 PSME1Q06323 249 aa32.77■■■□□ 2.84
SREBF1-214ENST00000486311 ADGRB2O60241 1585 aa32.75■■■□□ 2.83
SREBF1-214ENST00000486311 BCL9LQ86UU0 1499 aa32.75■■■□□ 2.83
SREBF1-214ENST00000486311 TNS3Q68CZ2 1445 aa32.74■■■□□ 2.83
SREBF1-214ENST00000486311 SBNO1A3KN83 1393 aa32.72■■■□□ 2.83
SREBF1-214ENST00000486311 HIRIP3Q9BW71 556 aaPredicted RBP32.72■■■□□ 2.83
SREBF1-214ENST00000486311 MINK1Q8N4C8 1332 aaPredicted RBP32.7■■■□□ 2.82
SREBF1-214ENST00000486311 PMFBP1Q8TBY8 1022 aa32.69■■■□□ 2.82
SREBF1-214ENST00000486311 EIF3AQ14152 1382 aaKnown RBP32.69■■■□□ 2.82
SREBF1-214ENST00000486311 USP32Q8NFA0 1604 aa32.68■■■□□ 2.82
SREBF1-214ENST00000486311 RGPD8O14715 1765 aaPredicted RBP32.67■■■□□ 2.82
SREBF1-214ENST00000486311 WASLO00401 505 aaPredicted RBP32.66■■■□□ 2.82
SREBF1-214ENST00000486311 MARF1Q9Y4F3 1742 aaKnown RBP32.65■■■□□ 2.82
SREBF1-214ENST00000486311 PRR36Q9H6K5 1346 aa32.65■■■□□ 2.82
SREBF1-214ENST00000486311 ARHGEF10O15013 1369 aa32.65■■■□□ 2.82
SREBF1-214ENST00000486311 SLIT2O94813 1529 aa32.65■■■□□ 2.82
SREBF1-214ENST00000486311 UNC5CLQ8IV45 518 aa32.64■■■□□ 2.82
SREBF1-214ENST00000486311 GJD4Q96KN9 370 aaPredicted RBP32.64■■■□□ 2.82
SREBF1-214ENST00000486311 TULP4Q9NRJ4 1543 aa32.62■■■□□ 2.81
SREBF1-214ENST00000486311 ATAD2Q6PL18 1390 aa32.62■■■□□ 2.81
SREBF1-214ENST00000486311 HAP1P54257 671 aaPredicted RBP32.62■■■□□ 2.81
SREBF1-214ENST00000486311 CABLES1Q8TDN4 633 aa32.62■■■□□ 2.81
SREBF1-214ENST00000486311 LMOD2Q6P5Q4 547 aa32.61■■■□□ 2.81
SREBF1-214ENST00000486311 GPRASP1Q5JY77 1395 aa32.58■■■□□ 2.81
SREBF1-214ENST00000486311 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.55■■■□□ 2.8
SREBF1-214ENST00000486311 PLEKHG5O94827 1062 aa32.55■■■□□ 2.8
SREBF1-214ENST00000486311 RALGAPBQ86X10 1494 aa32.54■■■□□ 2.8
SREBF1-214ENST00000486311 ARHGEF28Q8N1W1 1705 aaKnown RBP32.53■■■□□ 2.8
SREBF1-214ENST00000486311 NGDNQ8NEJ9 315 aaKnown RBP32.52■■■□□ 2.8
SREBF1-214ENST00000486311 NUDT16Q96DE0 195 aaKnown RBP32.5■■■□□ 2.79
SREBF1-214ENST00000486311 TRPM3Q9HCF6 1732 aaPredicted RBP32.5■■■□□ 2.79
SREBF1-214ENST00000486311 ATP7BP35670 1465 aa32.49■■■□□ 2.79
SREBF1-214ENST00000486311 VPS72Q15906 364 aa32.49■■■□□ 2.79
SREBF1-214ENST00000486311 GLI3P10071 1580 aa32.49■■■□□ 2.79
SREBF1-214ENST00000486311 FAM83GA6ND36 823 aa32.48■■■□□ 2.79
SREBF1-214ENST00000486311 NBPF1Q3BBV0 1214 aa32.48■■■□□ 2.79
SREBF1-214ENST00000486311 KIAA1210Q9ULL0 1709 aa32.48■■■□□ 2.79
SREBF1-214ENST00000486311 CDK19Q9BWU1 502 aa32.47■■■□□ 2.79
SREBF1-214ENST00000486311 ABCA3Q99758 1704 aa32.46■■■□□ 2.79
SREBF1-214ENST00000486311 ALS2Q96Q42 1657 aa32.44■■■□□ 2.78
SREBF1-214ENST00000486311 EP400Q96L91 3159 aa32.43■■■□□ 2.78
SREBF1-214ENST00000486311 PAK3O75914 559 aaPredicted RBP32.42■■■□□ 2.78
SREBF1-214ENST00000486311 NWD2Q9ULI1 1742 aa32.41■■■□□ 2.78
SREBF1-214ENST00000486311 CCDC125Q86Z20 511 aa32.41■■■□□ 2.78
SREBF1-214ENST00000486311 PLCH1Q4KWH8 1693 aa32.4■■■□□ 2.78
SREBF1-214ENST00000486311 ONECUT3O60422 494 aaPredicted RBP32.39■■■□□ 2.78
SREBF1-214ENST00000486311 CCDC9Q9Y3X0 531 aaKnown RBP32.39■■■□□ 2.78
SREBF1-214ENST00000486311 CCDC61Q9Y6R9 512 aa32.39■■■□□ 2.78
SREBF1-214ENST00000486311 SEPT12Q8IYM1 358 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms