RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
PKP4-213ENST00000486254 FER1L4A9Z1Z3 1794 aa16.04■□□□□ 0.16
PKP4-213ENST00000486254 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
PKP4-213ENST00000486254 CPS1P31327 1500 aa16.04■□□□□ 0.16
PKP4-213ENST00000486254 MLECQ14165 292 aa16.04■□□□□ 0.16
PKP4-213ENST00000486254 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
PKP4-213ENST00000486254 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
PKP4-213ENST00000486254 NSD3Q9BZ95 1437 aa16.04■□□□□ 0.16
PKP4-213ENST00000486254 C3P01024 1663 aa16.03■□□□□ 0.16
PKP4-213ENST00000486254 MED14O60244 1454 aa16.03■□□□□ 0.16
PKP4-213ENST00000486254 FKBP8Q14318 412 aa16.03■□□□□ 0.16
PKP4-213ENST00000486254 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.16
PKP4-213ENST00000486254 SLIT1O75093 1534 aa16.02■□□□□ 0.16
PKP4-213ENST00000486254 POLR3AO14802 1390 aaPredicted RBP16.02■□□□□ 0.15
PKP4-213ENST00000486254 RNF123Q5XPI4 1314 aa16.02■□□□□ 0.15
PKP4-213ENST00000486254 ANKRD26Q9UPS8 1709 aa16.01■□□□□ 0.15
PKP4-213ENST00000486254 CGNL1Q0VF96 1302 aa16.01■□□□□ 0.15
PKP4-213ENST00000486254 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
PKP4-213ENST00000486254 NGEFQ8N5V2 710 aa16■□□□□ 0.15
PKP4-213ENST00000486254 ARHGAP23Q9P227 1491 aa16■□□□□ 0.15
PKP4-213ENST00000486254 PLEKHG1Q9ULL1 1385 aa15.99■□□□□ 0.15
PKP4-213ENST00000486254 ATP7BP35670 1465 aa15.98■□□□□ 0.15
PKP4-213ENST00000486254 ADGRB2O60241 1585 aa15.98■□□□□ 0.15
PKP4-213ENST00000486254 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
PKP4-213ENST00000486254 PRAM1Q96QH2 718 aa15.97■□□□□ 0.15
PKP4-213ENST00000486254 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
PKP4-213ENST00000486254 POGKQ9P215 609 aa15.96■□□□□ 0.15
PKP4-213ENST00000486254 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.14
PKP4-213ENST00000486254 CD163L1Q9NR16 1453 aa15.95■□□□□ 0.14
PKP4-213ENST00000486254 ADAMTS13Q76LX8 1427 aa15.95■□□□□ 0.14
PKP4-213ENST00000486254 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
PKP4-213ENST00000486254 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
PKP4-213ENST00000486254 SHPRHQ149N8 1683 aa15.94■□□□□ 0.14
PKP4-213ENST00000486254 STK26Q9P289 416 aa15.93■□□□□ 0.14
PKP4-213ENST00000486254 METP08581 1390 aa15.93■□□□□ 0.14
PKP4-213ENST00000486254 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
PKP4-213ENST00000486254 ADAMTS8Q9UP79 889 aa15.92■□□□□ 0.14
PKP4-213ENST00000486254 KIF20BQ96Q89 1820 aa15.91■□□□□ 0.14
PKP4-213ENST00000486254 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
PKP4-213ENST00000486254 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
PKP4-213ENST00000486254 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
PKP4-213ENST00000486254 MINK1Q8N4C8 1332 aaPredicted RBP15.9■□□□□ 0.14
PKP4-213ENST00000486254 ZNF521Q96K83 1311 aa15.9■□□□□ 0.14
PKP4-213ENST00000486254 ZNF142P52746 1687 aaPredicted RBP15.89■□□□□ 0.13
PKP4-213ENST00000486254 CDC42BPGQ6DT37 1551 aa15.89■□□□□ 0.13
PKP4-213ENST00000486254 PTCH1Q13635 1447 aa15.88■□□□□ 0.13
PKP4-213ENST00000486254 CDK19Q9BWU1 502 aa15.88■□□□□ 0.13
PKP4-213ENST00000486254 CPSF1Q10570 1443 aaKnown RBP15.88■□□□□ 0.13
PKP4-213ENST00000486254 HDGFL2Q7Z4V5 671 aaPredicted RBP15.87■□□□□ 0.13
PKP4-213ENST00000486254 CEP170BQ9Y4F5 1589 aaPredicted RBP15.87■□□□□ 0.13
PKP4-213ENST00000486254 PLEKHH1Q9ULM0 1364 aa15.87■□□□□ 0.13
PKP4-213ENST00000486254 MON2Q7Z3U7 1717 aa15.87■□□□□ 0.13
PKP4-213ENST00000486254 ADAMTSL3P82987 1691 aa15.87■□□□□ 0.13
PKP4-213ENST00000486254 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
PKP4-213ENST00000486254 EID1Q9Y6B2 187 aa15.87■□□□□ 0.13
PKP4-213ENST00000486254 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
PKP4-213ENST00000486254 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
PKP4-213ENST00000486254 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
PKP4-213ENST00000486254 EDC4Q6P2E9 1401 aaKnown RBP15.86■□□□□ 0.13
PKP4-213ENST00000486254 TOPAZ1Q8N9V7 1692 aa15.85■□□□□ 0.13
PKP4-213ENST00000486254 PIK3R4Q99570 1358 aa15.85■□□□□ 0.13
PKP4-213ENST00000486254 AKAP12Q02952 1782 aa15.85■□□□□ 0.13
PKP4-213ENST00000486254 WASLO00401 505 aaPredicted RBP15.85■□□□□ 0.13
PKP4-213ENST00000486254 THEMISQ8N1K5 641 aaPredicted RBP15.85■□□□□ 0.13
PKP4-213ENST00000486254 XRN1Q8IZH2 1706 aaKnown RBP15.84■□□□□ 0.13
PKP4-213ENST00000486254 IQSEC2Q5JU85 1478 aa15.84■□□□□ 0.13
PKP4-213ENST00000486254 MSH5O43196 834 aa15.84■□□□□ 0.13
PKP4-213ENST00000486254 TBX22Q9Y458 520 aa15.84■□□□□ 0.13
PKP4-213ENST00000486254 COL3A1P02461 1466 aaPredicted RBP15.84■□□□□ 0.13
PKP4-213ENST00000486254 SETD1BQ9UPS6 1966 aaKnown RBP15.83■□□□□ 0.12
PKP4-213ENST00000486254 ITSN1Q15811 1721 aa15.83■□□□□ 0.12
PKP4-213ENST00000486254 RIMS1Q86UR5 1692 aaKnown RBP15.82■□□□□ 0.12
PKP4-213ENST00000486254 LTKP29376 864 aa15.82■□□□□ 0.12
PKP4-213ENST00000486254 TXNDC2Q86VQ3 553 aa15.82■□□□□ 0.12
PKP4-213ENST00000486254 RCAN3Q9UKA8 241 aa15.82■□□□□ 0.12
PKP4-213ENST00000486254 PNPLA6Q8IY17 1366 aa15.82■□□□□ 0.12
PKP4-213ENST00000486254 ROBO2Q9HCK4 1378 aa15.82■□□□□ 0.12
PKP4-213ENST00000486254 WAPLQ7Z5K2 1190 aa15.81■□□□□ 0.12
PKP4-213ENST00000486254 PPIP5K1Q6PFW1 1433 aa15.8■□□□□ 0.12
PKP4-213ENST00000486254 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.8■□□□□ 0.12
PKP4-213ENST00000486254 FYB1O15117 783 aa15.8■□□□□ 0.12
PKP4-213ENST00000486254 BCANQ96GW7 911 aa15.8■□□□□ 0.12
PKP4-213ENST00000486254 CEBPAP49715 358 aaPredicted RBP15.79■□□□□ 0.12
PKP4-213ENST00000486254 MTHFSP49914 203 aa15.79■□□□□ 0.12
PKP4-213ENST00000486254 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
PKP4-213ENST00000486254 TRMT2AQ8IZ69 625 aaKnown RBP15.79■□□□□ 0.12
PKP4-213ENST00000486254 CABP1Q9NZU7 370 aa15.79■□□□□ 0.12
PKP4-213ENST00000486254 CCDC61Q9Y6R9 512 aa15.79■□□□□ 0.12
PKP4-213ENST00000486254 PTPRUQ92729 1446 aa15.79■□□□□ 0.12
PKP4-213ENST00000486254 NRKQ7Z2Y5 1582 aa15.79■□□□□ 0.12
PKP4-213ENST00000486254 RRP1P56182 461 aaKnown RBP15.79■□□□□ 0.12
PKP4-213ENST00000486254 AATKQ6ZMQ8 1374 aa15.78■□□□□ 0.12
PKP4-213ENST00000486254 CCDC27Q2M243 656 aa15.77■□□□□ 0.11
PKP4-213ENST00000486254 DUSP27Q5VZP5 1158 aa15.77■□□□□ 0.11
PKP4-213ENST00000486254 RUNDC1Q96C34 613 aa15.77■□□□□ 0.11
PKP4-213ENST00000486254 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.11
PKP4-213ENST00000486254 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.11
PKP4-213ENST00000486254 E9PSI1 815 aa15.75■□□□□ 0.11
PKP4-213ENST00000486254 SLFN5Q08AF3 891 aa15.75■□□□□ 0.11
PKP4-213ENST00000486254 NUDT16Q96DE0 195 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms