RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 XIRP1Q702N8 1843 aaKnown RBP32.28■■■□□ 2.76
NBPF3-212ENST00000486229 POGKQ9P215 609 aa32.26■■■□□ 2.75
NBPF3-212ENST00000486229 ARHGEF28Q8N1W1 1705 aaKnown RBP32.23■■■□□ 2.75
NBPF3-212ENST00000486229 ROBO2Q9HCK4 1378 aa32.23■■■□□ 2.75
NBPF3-212ENST00000486229 C14orf37Q86TY3 774 aa32.22■■■□□ 2.75
NBPF3-212ENST00000486229 TMEM94Q12767 1356 aa32.21■■■□□ 2.75
NBPF3-212ENST00000486229 SLC24A1O60721 1099 aa32.19■■■□□ 2.74
NBPF3-212ENST00000486229 PRAM1Q96QH2 718 aa32.19■■■□□ 2.74
NBPF3-212ENST00000486229 CENPJQ9HC77 1338 aaPredicted RBP32.17■■■□□ 2.74
NBPF3-212ENST00000486229 MSH6P52701 1360 aa32.17■■■□□ 2.74
NBPF3-212ENST00000486229 C19orf44Q9H6X5 657 aa32.15■■■□□ 2.74
NBPF3-212ENST00000486229 WAPLQ7Z5K2 1190 aa32.14■■■□□ 2.74
NBPF3-212ENST00000486229 ADGRL3Q9HAR2 1447 aa32.14■■■□□ 2.74
NBPF3-212ENST00000486229 USP47Q96K76 1375 aa32.12■■■□□ 2.73
NBPF3-212ENST00000486229 DCCP43146 1447 aa32.11■■■□□ 2.73
NBPF3-212ENST00000486229 EIF4G2P78344 907 aaKnown RBP eCLIP32.1■■■□□ 2.73
NBPF3-212ENST00000486229 QRICH2Q9H0J4 1663 aa32.08■■■□□ 2.73
NBPF3-212ENST00000486229 ATF3P18847 181 aa32.08■■■□□ 2.73
NBPF3-212ENST00000486229 PLEKHH1Q9ULM0 1364 aa32.07■■■□□ 2.73
NBPF3-212ENST00000486229 NALCNQ8IZF0 1738 aa32.07■■■□□ 2.72
NBPF3-212ENST00000486229 SAFB2Q14151 953 aaKnown RBP eCLIP32.07■■■□□ 2.72
NBPF3-212ENST00000486229 CADPS2Q86UW7 1296 aa32.07■■■□□ 2.72
NBPF3-212ENST00000486229 SBNO2Q9Y2G9 1366 aa32.06■■■□□ 2.72
NBPF3-212ENST00000486229 RBM33Q96EV2 1170 aaKnown RBP32.05■■■□□ 2.72
NBPF3-212ENST00000486229 ADGRB2O60241 1585 aa32.05■■■□□ 2.72
NBPF3-212ENST00000486229 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.04■■■□□ 2.72
NBPF3-212ENST00000486229 CDC42BPGQ6DT37 1551 aa32.04■■■□□ 2.72
NBPF3-212ENST00000486229 MINK1Q8N4C8 1332 aaPredicted RBP32.01■■■□□ 2.72
NBPF3-212ENST00000486229 POTEAQ6S8J7 498 aa32.01■■■□□ 2.71
NBPF3-212ENST00000486229 ST20-MTHFSA0A0A6YYL1 179 aa32■■■□□ 2.71
NBPF3-212ENST00000486229 EVC2Q86UK5 1308 aa31.99■■■□□ 2.71
NBPF3-212ENST00000486229 WASLO00401 505 aaPredicted RBP31.95■■■□□ 2.71
NBPF3-212ENST00000486229 HIRIP3Q9BW71 556 aaPredicted RBP31.94■■■□□ 2.7
NBPF3-212ENST00000486229 ROBO1Q9Y6N7 1651 aa31.94■■■□□ 2.7
NBPF3-212ENST00000486229 CDCA8Q53HL2 280 aa31.93■■■□□ 2.7
NBPF3-212ENST00000486229 FMN2Q9NZ56 1722 aa31.92■■■□□ 2.7
NBPF3-212ENST00000486229 HSPA5P11021 654 aaKnown RBP31.92■■■□□ 2.7
NBPF3-212ENST00000486229 TMF1P82094 1093 aa31.92■■■□□ 2.7
NBPF3-212ENST00000486229 ANKARQ7Z5J8 1434 aa31.9■■■□□ 2.7
NBPF3-212ENST00000486229 CDK19Q9BWU1 502 aa31.89■■■□□ 2.7
NBPF3-212ENST00000486229 SRPK2P78362 688 aaKnown RBP31.88■■■□□ 2.69
NBPF3-212ENST00000486229 PUS7Q96PZ0 661 aaKnown RBP31.88■■■□□ 2.69
NBPF3-212ENST00000486229 TESK2Q96S53 571 aa31.88■■■□□ 2.69
NBPF3-212ENST00000486229 SLAIN2Q9P270 581 aa31.88■■■□□ 2.69
NBPF3-212ENST00000486229 TULP4Q9NRJ4 1543 aa31.87■■■□□ 2.69
NBPF3-212ENST00000486229 MST1RQ04912 1400 aa31.85■■■□□ 2.69
NBPF3-212ENST00000486229 ITSN1Q15811 1721 aa31.83■■■□□ 2.69
NBPF3-212ENST00000486229 ATAD2Q6PL18 1390 aa31.82■■■□□ 2.69
NBPF3-212ENST00000486229 C1orf167Q5SNV9 1468 aa31.82■■■□□ 2.68
NBPF3-212ENST00000486229 NUDT16Q96DE0 195 aaKnown RBP31.79■■■□□ 2.68
NBPF3-212ENST00000486229 CCDC61Q9Y6R9 512 aa31.78■■■□□ 2.68
NBPF3-212ENST00000486229 NUTM2FA1L443 756 aa31.76■■■□□ 2.67
NBPF3-212ENST00000486229 ESCO1Q5FWF5 840 aa31.76■■■□□ 2.67
NBPF3-212ENST00000486229 CABP2Q9NPB3 220 aa31.76■■■□□ 2.67
NBPF3-212ENST00000486229 KIF1AQ12756 1690 aa31.76■■■□□ 2.67
NBPF3-212ENST00000486229 ATP7BP35670 1465 aa31.75■■■□□ 2.67
NBPF3-212ENST00000486229 RGPD8O14715 1765 aaPredicted RBP31.74■■■□□ 2.67
NBPF3-212ENST00000486229 NINLQ9Y2I6 1382 aa31.74■■■□□ 2.67
NBPF3-212ENST00000486229 PHLPP1O60346 1717 aa31.74■■■□□ 2.67
NBPF3-212ENST00000486229 USP32Q8NFA0 1604 aa31.73■■■□□ 2.67
NBPF3-212ENST00000486229 PHF8Q9UPP1 1060 aa31.71■■■□□ 2.67
NBPF3-212ENST00000486229 TOPAZ1Q8N9V7 1692 aa31.7■■■□□ 2.66
NBPF3-212ENST00000486229 BRINP3Q76B58 766 aa31.69■■■□□ 2.66
NBPF3-212ENST00000486229 PRR36Q9H6K5 1346 aa31.69■■■□□ 2.66
NBPF3-212ENST00000486229 JCADQ9P266 1359 aa31.68■■■□□ 2.66
NBPF3-212ENST00000486229 COL16A1Q07092 1604 aaPredicted RBP31.67■■■□□ 2.66
NBPF3-212ENST00000486229 PPIP5K1Q6PFW1 1433 aa31.67■■■□□ 2.66
NBPF3-212ENST00000486229 PLEKHG3A1L390 1219 aa31.66■■■□□ 2.66
NBPF3-212ENST00000486229 ORAI2Q96SN7 254 aa31.66■■■□□ 2.66
NBPF3-212ENST00000486229 NPHP3Q7Z494 1330 aa31.65■■■□□ 2.66
NBPF3-212ENST00000486229 NGDNQ8NEJ9 315 aaKnown RBP31.64■■■□□ 2.66
NBPF3-212ENST00000486229 TMC1Q8TDI8 760 aa31.63■■■□□ 2.65
NBPF3-212ENST00000486229 ZNF692Q9BU19 519 aaPredicted RBP31.61■■■□□ 2.65
NBPF3-212ENST00000486229 TERF2IPQ9NYB0 399 aa31.61■■■□□ 2.65
NBPF3-212ENST00000486229 CABP1Q9NZU7 370 aa31.61■■■□□ 2.65
NBPF3-212ENST00000486229 PSME1Q06323 249 aa31.6■■■□□ 2.65
NBPF3-212ENST00000486229 POLR3GLQ9BT43 218 aa31.6■■■□□ 2.65
NBPF3-212ENST00000486229 HDGFL2Q7Z4V5 671 aaPredicted RBP31.59■■■□□ 2.65
NBPF3-212ENST00000486229 PMFBP1Q8TBY8 1022 aa31.59■■■□□ 2.65
NBPF3-212ENST00000486229 LRP6O75581 1613 aa31.59■■■□□ 2.65
NBPF3-212ENST00000486229 NHSL1Q5SYE7 1610 aa31.59■■■□□ 2.65
NBPF3-212ENST00000486229 AHDC1Q5TGY3 1603 aaPredicted RBP31.59■■■□□ 2.65
NBPF3-212ENST00000486229 POLR3AO14802 1390 aaPredicted RBP31.58■■■□□ 2.65
NBPF3-212ENST00000486229 BRD4O60885 1362 aaPredicted RBP31.57■■■□□ 2.64
NBPF3-212ENST00000486229 ACEP12821 1306 aa31.56■■■□□ 2.64
NBPF3-212ENST00000486229 FOXO3O43524 673 aa31.56■■■□□ 2.64
NBPF3-212ENST00000486229 KIF7Q2M1P5 1343 aa31.55■■■□□ 2.64
NBPF3-212ENST00000486229 UPF1Q92900 1129 aaKnown RBP eCLIP31.55■■■□□ 2.64
NBPF3-212ENST00000486229 CCDC7Q96M83 1385 aa31.54■■■□□ 2.64
NBPF3-212ENST00000486229 SPATA31A6Q5VVP1 1343 aa31.52■■■□□ 2.64
NBPF3-212ENST00000486229 SHPRHQ149N8 1683 aa31.52■■■□□ 2.64
NBPF3-212ENST00000486229 SLC12A5Q9H2X9 1139 aa31.52■■■□□ 2.64
NBPF3-212ENST00000486229 AKAP12Q02952 1782 aa31.51■■■□□ 2.64
NBPF3-212ENST00000486229 C11orf95C9JLR9 678 aaPredicted RBP31.5■■■□□ 2.63
NBPF3-212ENST00000486229 KRT28Q7Z3Y7 464 aa31.5■■■□□ 2.63
NBPF3-212ENST00000486229 ANKRD36BQ8N2N9 1353 aa31.5■■■□□ 2.63
NBPF3-212ENST00000486229 SOS2Q07890 1332 aaPredicted RBP31.49■■■□□ 2.63
NBPF3-212ENST00000486229 MYOM1P52179 1685 aa31.48■■■□□ 2.63
NBPF3-212ENST00000486229 LRRC59Q96AG4 307 aaKnown RBP31.48■■■□□ 2.63
NBPF3-212ENST00000486229 CPSF1Q10570 1443 aaKnown RBP31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms