RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
SND1-213ENST00000486037 PXDNQ92626 1479 aa15.3■□□□□ 0.04
SND1-213ENST00000486037 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
SND1-213ENST00000486037 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
SND1-213ENST00000486037 SLIT2O94813 1529 aa15.29■□□□□ 0.04
SND1-213ENST00000486037 SPHKAPQ2M3C7 1700 aa15.29■□□□□ 0.04
SND1-213ENST00000486037 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
SND1-213ENST00000486037 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
SND1-213ENST00000486037 SF3B2Q13435 895 aaKnown RBP15.27■□□□□ 0.04
SND1-213ENST00000486037 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
SND1-213ENST00000486037 ZNF326Q5BKZ1 582 aaKnown RBP15.24■□□□□ 0.03
SND1-213ENST00000486037 YY1P25490 414 aa15.23■□□□□ 0.03
SND1-213ENST00000486037 R3HDM1Q15032 1099 aaKnown RBP15.23■□□□□ 0.03
SND1-213ENST00000486037 NPHP3Q7Z494 1330 aa15.22■□□□□ 0.03
SND1-213ENST00000486037 FOXO3O43524 673 aa15.22■□□□□ 0.03
SND1-213ENST00000486037 ESCO1Q5FWF5 840 aa15.22■□□□□ 0.03
SND1-213ENST00000486037 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
SND1-213ENST00000486037 EN1Q05925 392 aaPredicted RBP15.21■□□□□ 0.03
SND1-213ENST00000486037 FAM50AQ14320 339 aaKnown RBP15.21■□□□□ 0.03
SND1-213ENST00000486037 USP32Q8NFA0 1604 aa15.21■□□□□ 0.02
SND1-213ENST00000486037 BAG6P46379 1132 aa15.2■□□□□ 0.02
SND1-213ENST00000486037 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
SND1-213ENST00000486037 VPS72Q15906 364 aa15.19■□□□□ 0.02
SND1-213ENST00000486037 NUP155O75694 1391 aa15.19■□□□□ 0.02
SND1-213ENST00000486037 PRAG1Q86YV5 1406 aa15.17■□□□□ 0.02
SND1-213ENST00000486037 CLTCL1P53675 1640 aa15.17■□□□□ 0.02
SND1-213ENST00000486037 PLCH1Q4KWH8 1693 aa15.17■□□□□ 0.02
SND1-213ENST00000486037 CDC42BPGQ6DT37 1551 aa15.17■□□□□ 0.02
SND1-213ENST00000486037 NUTM2FA1L443 756 aa15.17■□□□□ 0.02
SND1-213ENST00000486037 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
SND1-213ENST00000486037 SPATA31A3Q5VYP0 1347 aa15.16■□□□□ 0.02
SND1-213ENST00000486037 CABLES1Q8TDN4 633 aa15.15■□□□□ 0.02
SND1-213ENST00000486037 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
SND1-213ENST00000486037 HFM1A2PYH4 1435 aa15.15■□□□□ 0.02
SND1-213ENST00000486037 UTRNP46939 3433 aa15.15■□□□□ 0.02
SND1-213ENST00000486037 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
SND1-213ENST00000486037 EZH2Q15910 746 aaKnown RBP15.13■□□□□ 0.01
SND1-213ENST00000486037 TNS1Q9HBL0 1735 aaKnown RBP15.13■□□□□ 0.01
SND1-213ENST00000486037 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
SND1-213ENST00000486037 NWD2Q9ULI1 1742 aa15.12■□□□□ 0.01
SND1-213ENST00000486037 NAIPQ13075 1403 aa15.12■□□□□ 0.01
SND1-213ENST00000486037 FAM98CQ17RN3 349 aaKnown RBP15.12■□□□□ 0.01
SND1-213ENST00000486037 A0A0G2JS52 829 aa15.11■□□□□ 0.01
SND1-213ENST00000486037 MYT1Q01538 1121 aa15.11■□□□□ 0.01
SND1-213ENST00000486037 DISP2A7MBM2 1401 aa15.1■□□□□ 0.01
SND1-213ENST00000486037 ABCA3Q99758 1704 aa15.1■□□□□ 0.01
SND1-213ENST00000486037 LRPPRCP42704 1394 aaKnown RBP15.1■□□□□ 0.01
SND1-213ENST00000486037 NRAPQ86VF7 1730 aa15.09■□□□□ 0.01
SND1-213ENST00000486037 FAM83GA6ND36 823 aa15.09■□□□□ 0.01
SND1-213ENST00000486037 APLP2Q06481 763 aa15.09■□□□□ 0.01
SND1-213ENST00000486037 WAPLQ7Z5K2 1190 aa15.09■□□□□ 0.01
SND1-213ENST00000486037 ROCK1Q13464 1354 aa15.09■□□□□ 0.01
SND1-213ENST00000486037 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
SND1-213ENST00000486037 PLEKHH1Q9ULM0 1364 aa15.08■□□□□ 0
SND1-213ENST00000486037 CAMKK2Q96RR4 588 aa15.07■□□□□ 0
SND1-213ENST00000486037 CCDC144AA2RUR9 1427 aa15.07■□□□□ 0
SND1-213ENST00000486037 TNS3Q68CZ2 1445 aa15.07■□□□□ 0
SND1-213ENST00000486037 KIF1BO60333 1816 aa15.06■□□□□ 0
SND1-213ENST00000486037 HAP1P54257 671 aaPredicted RBP15.06■□□□□ 0
SND1-213ENST00000486037 CAMTA1Q9Y6Y1 1673 aa15.06■□□□□ 0
SND1-213ENST00000486037 FMN2Q9NZ56 1722 aa15.06■□□□□ 0
SND1-213ENST00000486037 KIF1AQ12756 1690 aa15.04■□□□□ -0
SND1-213ENST00000486037 VGFO15240 615 aaPredicted RBP15.04■□□□□ -0
SND1-213ENST00000486037 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
SND1-213ENST00000486037 STK26Q9P289 416 aa15.03■□□□□ -0
SND1-213ENST00000486037 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
SND1-213ENST00000486037 TRIM37O94972 964 aa15.02■□□□□ -0
SND1-213ENST00000486037 IFFO2Q5TF58 517 aa15.02■□□□□ -0
SND1-213ENST00000486037 BTG4Q9NY30 223 aa15.02■□□□□ -0
SND1-213ENST00000486037 RREB1Q92766 1687 aa15.02□□□□□ -0.01
SND1-213ENST00000486037 PPLO60437 1756 aa15.01□□□□□ -0.01
SND1-213ENST00000486037 NUP188Q5SRE5 1749 aa15.01□□□□□ -0.01
SND1-213ENST00000486037 TECPR2O15040 1411 aa15□□□□□ -0.01
SND1-213ENST00000486037 LMOD2Q6P5Q4 547 aa15□□□□□ -0.01
SND1-213ENST00000486037 ADGRB2O60241 1585 aa14.99□□□□□ -0.01
SND1-213ENST00000486037 SPATA31A5Q5VU36 1347 aa14.99□□□□□ -0.01
SND1-213ENST00000486037 SPATA31A7Q8IWB4 1347 aa14.99□□□□□ -0.01
SND1-213ENST00000486037 ITGAEP38570 1179 aa14.99□□□□□ -0.01
SND1-213ENST00000486037 ZNF784Q8NCA9 323 aaPredicted RBP14.99□□□□□ -0.01
SND1-213ENST00000486037 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
SND1-213ENST00000486037 ADGRF5Q8IZF2 1346 aa14.98□□□□□ -0.01
SND1-213ENST00000486037 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
SND1-213ENST00000486037 APBA3O96018 575 aa14.98□□□□□ -0.01
SND1-213ENST00000486037 PHF8Q9UPP1 1060 aa14.98□□□□□ -0.01
SND1-213ENST00000486037 CEP350Q5VT06 3117 aa14.97□□□□□ -0.01
SND1-213ENST00000486037 NRXN1Q9ULB1 1477 aa14.96□□□□□ -0.01
SND1-213ENST00000486037 TMEM132EQ6IEE7 984 aa14.96□□□□□ -0.01
SND1-213ENST00000486037 PPP1R1BQ9UD71 204 aaPredicted RBP14.96□□□□□ -0.01
SND1-213ENST00000486037 IFT172Q9UG01 1749 aa14.96□□□□□ -0.01
SND1-213ENST00000486037 NINLQ9Y2I6 1382 aa14.96□□□□□ -0.02
SND1-213ENST00000486037 COL14A1Q05707 1796 aaKnown RBP14.96□□□□□ -0.02
SND1-213ENST00000486037 RPGRIP1LQ68CZ1 1315 aa14.95□□□□□ -0.02
SND1-213ENST00000486037 KNDC1Q76NI1 1749 aa14.95□□□□□ -0.02
SND1-213ENST00000486037 PSME1Q06323 249 aa14.95□□□□□ -0.02
SND1-213ENST00000486037 ARHGEF10O15013 1369 aa14.95□□□□□ -0.02
SND1-213ENST00000486037 KCNQ2O43526 872 aa14.94□□□□□ -0.02
SND1-213ENST00000486037 SPON1Q9HCB6 807 aa14.94□□□□□ -0.02
SND1-213ENST00000486037 PARD3Q8TEW0 1356 aa14.94□□□□□ -0.02
SND1-213ENST00000486037 ABCC11Q96J66 1382 aa14.94□□□□□ -0.02
SND1-213ENST00000486037 TRPM3Q9HCF6 1732 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms