RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 LRPPRCP42704 1394 aaKnown RBP20.25■□□□□ 0.83
SCAF4-206ENST00000485790 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
SCAF4-206ENST00000485790 FOXO3O43524 673 aa20.25■□□□□ 0.83
SCAF4-206ENST00000485790 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
SCAF4-206ENST00000485790 SPATA31E1Q6ZUB1 1445 aa20.25■□□□□ 0.83
SCAF4-206ENST00000485790 PRAG1Q86YV5 1406 aa20.25■□□□□ 0.83
SCAF4-206ENST00000485790 NUTM2FA1L443 756 aa20.22■□□□□ 0.83
SCAF4-206ENST00000485790 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
SCAF4-206ENST00000485790 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
SCAF4-206ENST00000485790 UPF1Q92900 1129 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCAF4-206ENST00000485790 USP21Q9UK80 565 aa20.2■□□□□ 0.82
SCAF4-206ENST00000485790 HRCP23327 699 aa20.19■□□□□ 0.82
SCAF4-206ENST00000485790 CFAP70Q5T0N1 1121 aa20.19■□□□□ 0.82
SCAF4-206ENST00000485790 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
SCAF4-206ENST00000485790 POGKQ9P215 609 aa20.18■□□□□ 0.82
SCAF4-206ENST00000485790 TRPC5Q9UL62 973 aaPredicted RBP20.18■□□□□ 0.82
SCAF4-206ENST00000485790 PSME1Q06323 249 aa20.17■□□□□ 0.82
SCAF4-206ENST00000485790 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
SCAF4-206ENST00000485790 XPCQ01831 940 aaPredicted RBP20.16■□□□□ 0.82
SCAF4-206ENST00000485790 FNBP4Q8N3X1 1017 aaPredicted RBP20.16■□□□□ 0.82
SCAF4-206ENST00000485790 TECPR2O15040 1411 aa20.16■□□□□ 0.82
SCAF4-206ENST00000485790 YTHDC2Q9H6S0 1430 aaKnown RBP20.16■□□□□ 0.82
SCAF4-206ENST00000485790 KRT28Q7Z3Y7 464 aa20.15■□□□□ 0.82
SCAF4-206ENST00000485790 PIK3C2GO75747 1445 aa20.15■□□□□ 0.82
SCAF4-206ENST00000485790 NHSL1Q5SYE7 1610 aa20.14■□□□□ 0.81
SCAF4-206ENST00000485790 PRAM1Q96QH2 718 aa20.14■□□□□ 0.81
SCAF4-206ENST00000485790 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
SCAF4-206ENST00000485790 CDK12Q9NYV4 1490 aaPredicted RBP20.13■□□□□ 0.81
SCAF4-206ENST00000485790 PPLO60437 1756 aa20.13■□□□□ 0.81
SCAF4-206ENST00000485790 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
SCAF4-206ENST00000485790 PLEKHH1Q9ULM0 1364 aa20.12■□□□□ 0.81
SCAF4-206ENST00000485790 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
SCAF4-206ENST00000485790 PHF8Q9UPP1 1060 aa20.12■□□□□ 0.81
SCAF4-206ENST00000485790 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
SCAF4-206ENST00000485790 SAFB2Q14151 953 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCAF4-206ENST00000485790 SPATA31A3Q5VYP0 1347 aa20.08■□□□□ 0.81
SCAF4-206ENST00000485790 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.81
SCAF4-206ENST00000485790 TRAK1Q9UPV9 953 aa20.08■□□□□ 0.81
SCAF4-206ENST00000485790 CDC42BPGQ6DT37 1551 aa20.08■□□□□ 0.8
SCAF4-206ENST00000485790 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
SCAF4-206ENST00000485790 GJD4Q96KN9 370 aaPredicted RBP20.04■□□□□ 0.8
SCAF4-206ENST00000485790 LAMC1P11047 1609 aa20.04■□□□□ 0.8
SCAF4-206ENST00000485790 MYOM2P54296 1465 aa20.04■□□□□ 0.8
SCAF4-206ENST00000485790 NRXN1Q9ULB1 1477 aa20.04■□□□□ 0.8
SCAF4-206ENST00000485790 PXDNQ92626 1479 aa20.03■□□□□ 0.8
SCAF4-206ENST00000485790 UNC5CLQ8IV45 518 aa20.02■□□□□ 0.8
SCAF4-206ENST00000485790 ATAD2Q6PL18 1390 aa20.01■□□□□ 0.79
SCAF4-206ENST00000485790 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
SCAF4-206ENST00000485790 CCDC125Q86Z20 511 aa20■□□□□ 0.79
SCAF4-206ENST00000485790 HIRIP3Q9BW71 556 aaPredicted RBP20■□□□□ 0.79
SCAF4-206ENST00000485790 RGS12O14924 1447 aa20■□□□□ 0.79
SCAF4-206ENST00000485790 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
SCAF4-206ENST00000485790 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
SCAF4-206ENST00000485790 MINK1Q8N4C8 1332 aaPredicted RBP19.99■□□□□ 0.79
SCAF4-206ENST00000485790 SBNO1A3KN83 1393 aa19.98■□□□□ 0.79
SCAF4-206ENST00000485790 GPRASP1Q5JY77 1395 aa19.98■□□□□ 0.79
SCAF4-206ENST00000485790 WASLO00401 505 aaPredicted RBP19.98■□□□□ 0.79
SCAF4-206ENST00000485790 ARHGEF10O15013 1369 aa19.97■□□□□ 0.79
SCAF4-206ENST00000485790 ATRNO75882 1429 aa19.97■□□□□ 0.79
SCAF4-206ENST00000485790 NGDNQ8NEJ9 315 aaKnown RBP19.97■□□□□ 0.79
SCAF4-206ENST00000485790 CABLES1Q8TDN4 633 aa19.97■□□□□ 0.79
SCAF4-206ENST00000485790 BCL9LQ86UU0 1499 aa19.97■□□□□ 0.79
SCAF4-206ENST00000485790 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
SCAF4-206ENST00000485790 CCDC9Q9Y3X0 531 aaKnown RBP19.95■□□□□ 0.78
SCAF4-206ENST00000485790 IFT172Q9UG01 1749 aa19.94■□□□□ 0.78
SCAF4-206ENST00000485790 DLC1Q96QB1 1528 aa19.93■□□□□ 0.78
SCAF4-206ENST00000485790 PAK3O75914 559 aaPredicted RBP19.93■□□□□ 0.78
SCAF4-206ENST00000485790 COL22A1Q8NFW1 1626 aaPredicted RBP19.93■□□□□ 0.78
SCAF4-206ENST00000485790 TNS3Q68CZ2 1445 aa19.93■□□□□ 0.78
SCAF4-206ENST00000485790 VPS72Q15906 364 aa19.92■□□□□ 0.78
SCAF4-206ENST00000485790 KNDC1Q76NI1 1749 aa19.91■□□□□ 0.78
SCAF4-206ENST00000485790 FAM83GA6ND36 823 aa19.91■□□□□ 0.78
SCAF4-206ENST00000485790 NUDT16Q96DE0 195 aaKnown RBP19.9■□□□□ 0.78
SCAF4-206ENST00000485790 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
SCAF4-206ENST00000485790 KIF1AQ12756 1690 aa19.88■□□□□ 0.77
SCAF4-206ENST00000485790 SEPT12Q8IYM1 358 aa19.88■□□□□ 0.77
SCAF4-206ENST00000485790 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
SCAF4-206ENST00000485790 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
SCAF4-206ENST00000485790 ONECUT3O60422 494 aaPredicted RBP19.87■□□□□ 0.77
SCAF4-206ENST00000485790 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
SCAF4-206ENST00000485790 SLIT2O94813 1529 aa19.86■□□□□ 0.77
SCAF4-206ENST00000485790 PRR36Q9H6K5 1346 aa19.86■□□□□ 0.77
SCAF4-206ENST00000485790 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
SCAF4-206ENST00000485790 ADGRB1O14514 1584 aa19.86■□□□□ 0.77
SCAF4-206ENST00000485790 BTG4Q9NY30 223 aa19.85■□□□□ 0.77
SCAF4-206ENST00000485790 A0A0G2JS52 829 aa19.84■□□□□ 0.77
SCAF4-206ENST00000485790 MYT1Q01538 1121 aa19.84■□□□□ 0.77
SCAF4-206ENST00000485790 RALGAPBQ86X10 1494 aa19.83■□□□□ 0.76
SCAF4-206ENST00000485790 KRT27Q7Z3Y8 459 aa19.82■□□□□ 0.76
SCAF4-206ENST00000485790 NBPF1Q3BBV0 1214 aa19.81■□□□□ 0.76
SCAF4-206ENST00000485790 NBPF8Q3BBV2 869 aa19.81■□□□□ 0.76
SCAF4-206ENST00000485790 PRDM11Q9NQV5 511 aa19.81■□□□□ 0.76
SCAF4-206ENST00000485790 PLEKHG3A1L390 1219 aa19.8■□□□□ 0.76
SCAF4-206ENST00000485790 SRPK2P78362 688 aaKnown RBP19.79■□□□□ 0.76
SCAF4-206ENST00000485790 TULP4Q9NRJ4 1543 aa19.78■□□□□ 0.76
SCAF4-206ENST00000485790 FAM98CQ17RN3 349 aaKnown RBP19.78■□□□□ 0.76
SCAF4-206ENST00000485790 ACEP12821 1306 aa19.77■□□□□ 0.76
SCAF4-206ENST00000485790 ADGRB2O60241 1585 aa19.77■□□□□ 0.76
SCAF4-206ENST00000485790 EVA1CP58658 441 aa19.76■□□□□ 0.75
SCAF4-206ENST00000485790 ABTB2Q8N961 1025 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 567.9 ms