RNA–Protein interactions for RNA: ENST00000485596.5

PDE8A-205, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,999 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-205ENST00000485596 PANK2Q9BZ23 570 aa21.81■■□□□ 1.08
PDE8A-205ENST00000485596 NPC1L1Q9UHC9 1359 aa21.81■■□□□ 1.08
PDE8A-205ENST00000485596 ABCC2Q92887 1545 aa21.8■■□□□ 1.08
PDE8A-205ENST00000485596 PLXNC1O60486 1568 aa21.8■■□□□ 1.08
PDE8A-205ENST00000485596 ANTXR1Q9H6X2 564 aa21.8■■□□□ 1.08
PDE8A-205ENST00000485596 RRAGDQ9NQL2 400 aaPredicted RBP21.8■■□□□ 1.08
PDE8A-205ENST00000485596 FOXD4L1Q9NU39 408 aa21.8■■□□□ 1.08
PDE8A-205ENST00000485596 DZIP1LQ8IYY4 767 aaKnown RBP21.79■■□□□ 1.08
PDE8A-205ENST00000485596 ZKSCAN2Q63HK3 967 aa21.78■■□□□ 1.08
PDE8A-205ENST00000485596 C22orf23Q9BZE7 217 aa21.78■■□□□ 1.08
PDE8A-205ENST00000485596 GGNBP2Q9H3C7 697 aa21.78■■□□□ 1.08
PDE8A-205ENST00000485596 CFAP65Q6ZU64 1925 aaKnown RBP21.78■■□□□ 1.08
PDE8A-205ENST00000485596 MVPQ14764 893 aaKnown RBP21.78■■□□□ 1.08
PDE8A-205ENST00000485596 MYOM1P52179 1685 aa21.78■■□□□ 1.08
PDE8A-205ENST00000485596 POLR3AO14802 1390 aaPredicted RBP21.77■■□□□ 1.08
PDE8A-205ENST00000485596 FAM43AQ8N2R8 423 aa21.77■■□□□ 1.08
PDE8A-205ENST00000485596 NOS1P29475 1434 aa21.77■■□□□ 1.07
PDE8A-205ENST00000485596 MYH16Q9H6N6 1097 aa21.76■■□□□ 1.07
PDE8A-205ENST00000485596 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
PDE8A-205ENST00000485596 KDM5AP29375 1690 aaKnown RBP21.76■■□□□ 1.07
PDE8A-205ENST00000485596 TRPM2O94759 1503 aa21.74■■□□□ 1.07
PDE8A-205ENST00000485596 WDR63Q8IWG1 891 aa21.74■■□□□ 1.07
PDE8A-205ENST00000485596 SSH1Q8WYL5 1049 aa21.74■■□□□ 1.07
PDE8A-205ENST00000485596 STAC3Q96MF2 364 aa21.74■■□□□ 1.07
PDE8A-205ENST00000485596 TRIM27P14373 513 aa21.74■■□□□ 1.07
PDE8A-205ENST00000485596 LNPKQ9C0E8 428 aa21.74■■□□□ 1.07
PDE8A-205ENST00000485596 XRCC6P12956 609 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDE8A-205ENST00000485596 NOB1Q9ULX3 412 aaKnown RBP21.73■■□□□ 1.07
PDE8A-205ENST00000485596 GOLGA6L3A6NEY3 463 aa21.73■■□□□ 1.07
PDE8A-205ENST00000485596 MCM4P33991 863 aa21.73■■□□□ 1.07
PDE8A-205ENST00000485596 NGEFQ8N5V2 710 aa21.73■■□□□ 1.07
PDE8A-205ENST00000485596 PTPRTO14522 1441 aa21.73■■□□□ 1.07
PDE8A-205ENST00000485596 FBLN1P23142 703 aa21.72■■□□□ 1.07
PDE8A-205ENST00000485596 NLRP1Q9C000 1473 aa21.72■■□□□ 1.07
PDE8A-205ENST00000485596 SRPK2P78362 688 aaKnown RBP21.71■■□□□ 1.07
PDE8A-205ENST00000485596 L1TD1Q5T7N2 865 aaKnown RBP21.7■■□□□ 1.06
PDE8A-205ENST00000485596 SPHKAPQ2M3C7 1700 aa21.7■■□□□ 1.06
PDE8A-205ENST00000485596 ELL2O00472 640 aaPredicted RBP21.7■■□□□ 1.06
PDE8A-205ENST00000485596 TMEM57Q8N5G2 664 aa21.7■■□□□ 1.06
PDE8A-205ENST00000485596 ABCC1P33527 1531 aa21.69■■□□□ 1.06
PDE8A-205ENST00000485596 TRAK2O60296 914 aa21.69■■□□□ 1.06
PDE8A-205ENST00000485596 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
PDE8A-205ENST00000485596 C1orf115Q9H7X2 142 aa21.69■■□□□ 1.06
PDE8A-205ENST00000485596 NINLQ9Y2I6 1382 aa21.69■■□□□ 1.06
PDE8A-205ENST00000485596 CEP152O94986 1710 aa21.68■■□□□ 1.06
PDE8A-205ENST00000485596 HSCBQ8IWL3 235 aa21.67■■□□□ 1.06
PDE8A-205ENST00000485596 NAP1L5Q96NT1 182 aaPredicted RBP21.67■■□□□ 1.06
PDE8A-205ENST00000485596 RIPK4P57078 832 aa21.66■■□□□ 1.06
PDE8A-205ENST00000485596 CHD1O14646 1710 aa21.65■■□□□ 1.06
PDE8A-205ENST00000485596 HSP90AA1P07900 732 aaKnown RBP21.65■■□□□ 1.06
PDE8A-205ENST00000485596 TMPOP42166 694 aaKnown RBP21.65■■□□□ 1.06
PDE8A-205ENST00000485596 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
PDE8A-205ENST00000485596 CHMP5Q9NZZ3 219 aa21.65■■□□□ 1.06
PDE8A-205ENST00000485596 ABCA6Q8N139 1617 aa21.65■■□□□ 1.06
PDE8A-205ENST00000485596 ATF7IPQ6VMQ6 1270 aa21.64■■□□□ 1.06
PDE8A-205ENST00000485596 THUMPD2Q9BTF0 503 aaKnown RBP21.63■■□□□ 1.05
PDE8A-205ENST00000485596 RSPH6AQ9H0K4 717 aa21.63■■□□□ 1.05
PDE8A-205ENST00000485596 MINK1Q8N4C8 1332 aaPredicted RBP21.63■■□□□ 1.05
PDE8A-205ENST00000485596 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
PDE8A-205ENST00000485596 ZFYVE16Q7Z3T8 1539 aa21.62■■□□□ 1.05
PDE8A-205ENST00000485596 TRIM35Q9UPQ4 493 aa21.62■■□□□ 1.05
PDE8A-205ENST00000485596 DDX19BQ9UMR2 479 aa21.61■■□□□ 1.05
PDE8A-205ENST00000485596 FANCAO15360 1455 aa21.61■■□□□ 1.05
PDE8A-205ENST00000485596 HSP90AB1P08238 724 aaKnown RBP21.61■■□□□ 1.05
PDE8A-205ENST00000485596 ANKRD45Q5TZF3 282 aa21.6■■□□□ 1.05
PDE8A-205ENST00000485596 EVC2Q86UK5 1308 aa21.6■■□□□ 1.05
PDE8A-205ENST00000485596 ZCCHC11Q5TAX3 1644 aaKnown RBP21.59■■□□□ 1.05
PDE8A-205ENST00000485596 MAP3K4Q9Y6R4 1608 aa21.59■■□□□ 1.05
PDE8A-205ENST00000485596 RBM42Q9BTD8 480 aaKnown RBP21.59■■□□□ 1.05
PDE8A-205ENST00000485596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.59■■□□□ 1.059e-7■■■□□ 14.8
PDE8A-205ENST00000485596 CCDC27Q2M243 656 aa21.58■■□□□ 1.04
PDE8A-205ENST00000485596 HMOX1P09601 288 aa21.57■■□□□ 1.04
PDE8A-205ENST00000485596 ADGRL1O94910 1474 aa21.57■■□□□ 1.04
PDE8A-205ENST00000485596 RTEL1-TNFRSF6BF6WH68 1400 aa21.57■■□□□ 1.04
PDE8A-205ENST00000485596 ZNF518AQ6AHZ1 1483 aa21.57■■□□□ 1.04
PDE8A-205ENST00000485596 ATP7AQ04656 1500 aa21.57■■□□□ 1.04
PDE8A-205ENST00000485596 PNNQ9H307 717 aaKnown RBP21.56■■□□□ 1.04
PDE8A-205ENST00000485596 AAMPQ13685 434 aa21.56■■□□□ 1.04
PDE8A-205ENST00000485596 IQSEC2Q5JU85 1478 aa21.54■■□□□ 1.04
PDE8A-205ENST00000485596 TET3O43151 1660 aa21.54■■□□□ 1.04
PDE8A-205ENST00000485596 VIRMAQ69YN4 1812 aaKnown RBP21.54■■□□□ 1.04
PDE8A-205ENST00000485596 CD2BP2O95400 341 aaKnown RBP21.54■■□□□ 1.04
PDE8A-205ENST00000485596 ZBTB40Q9NUA8 1239 aa21.54■■□□□ 1.04
PDE8A-205ENST00000485596 SHPRHQ149N8 1683 aa21.53■■□□□ 1.04
PDE8A-205ENST00000485596 TNPO1Q92973 898 aaKnown RBP21.53■■□□□ 1.04
PDE8A-205ENST00000485596 HDAC1Q13547 482 aaPredicted RBP21.53■■□□□ 1.04
PDE8A-205ENST00000485596 PLEKHF1Q96S99 279 aa21.53■■□□□ 1.04
PDE8A-205ENST00000485596 APBB1O00213 710 aa21.52■■□□□ 1.04
PDE8A-205ENST00000485596 CD109Q6YHK3 1445 aa21.52■■□□□ 1.04
PDE8A-205ENST00000485596 SMC5Q8IY18 1101 aa21.52■■□□□ 1.04
PDE8A-205ENST00000485596 CHD1LQ86WJ1 897 aa21.51■■□□□ 1.03
PDE8A-205ENST00000485596 FSD2A1L4K1 749 aa21.51■■□□□ 1.03
PDE8A-205ENST00000485596 FYB1O15117 783 aa21.51■■□□□ 1.03
PDE8A-205ENST00000485596 GRPEL1Q9HAV7 217 aa21.51■■□□□ 1.03
PDE8A-205ENST00000485596 DIAPH1O60610 1272 aaKnown RBP21.51■■□□□ 1.03
PDE8A-205ENST00000485596 MYOM2P54296 1465 aa21.5■■□□□ 1.03
PDE8A-205ENST00000485596 PRKAR2BP31323 418 aa21.5■■□□□ 1.03
PDE8A-205ENST00000485596 A0A1W2PP64 1363 aa21.5■■□□□ 1.03
PDE8A-205ENST00000485596 IPO8O15397 1037 aaKnown RBP21.49■■□□□ 1.03
PDE8A-205ENST00000485596 GAS2L3Q86XJ1 694 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms