RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 DCCP43146 1447 aa28.3■■■□□ 2.12
COL6A2-208ENST00000485591 EIF3AQ14152 1382 aaKnown RBP28.29■■■□□ 2.12
COL6A2-208ENST00000485591 C14orf37Q86TY3 774 aa28.29■■■□□ 2.12
COL6A2-208ENST00000485591 POGKQ9P215 609 aa28.28■■■□□ 2.12
COL6A2-208ENST00000485591 C19orf44Q9H6X5 657 aa28.27■■■□□ 2.12
COL6A2-208ENST00000485591 CENPJQ9HC77 1338 aaPredicted RBP28.23■■■□□ 2.11
COL6A2-208ENST00000485591 FMN2Q9NZ56 1722 aa28.23■■■□□ 2.11
COL6A2-208ENST00000485591 SAFB2Q14151 953 aaKnown RBP eCLIP28.22■■■□□ 2.11
COL6A2-208ENST00000485591 USP47Q96K76 1375 aa28.19■■■□□ 2.1
COL6A2-208ENST00000485591 CADPS2Q86UW7 1296 aa28.18■■■□□ 2.1
COL6A2-208ENST00000485591 ATF3P18847 181 aa28.17■■■□□ 2.1
COL6A2-208ENST00000485591 MINK1Q8N4C8 1332 aaPredicted RBP28.17■■■□□ 2.1
COL6A2-208ENST00000485591 SBNO2Q9Y2G9 1366 aa28.16■■■□□ 2.1
COL6A2-208ENST00000485591 TOM1O60784 492 aa28.16■■■□□ 2.1
COL6A2-208ENST00000485591 MST1RQ04912 1400 aa28.15■■■□□ 2.1
COL6A2-208ENST00000485591 UBAP1LF5GYI3 381 aa28.14■■■□□ 2.1
COL6A2-208ENST00000485591 ZEB1P37275 1124 aaPredicted RBP28.12■■■□□ 2.09
COL6A2-208ENST00000485591 HIRIP3Q9BW71 556 aaPredicted RBP28.12■■■□□ 2.09
COL6A2-208ENST00000485591 TULP4Q9NRJ4 1543 aa28.12■■■□□ 2.09
COL6A2-208ENST00000485591 USP32Q8NFA0 1604 aa28.11■■■□□ 2.09
COL6A2-208ENST00000485591 RGPD8O14715 1765 aaPredicted RBP28.1■■■□□ 2.09
COL6A2-208ENST00000485591 ROBO1Q9Y6N7 1651 aa28.09■■■□□ 2.09
COL6A2-208ENST00000485591 C1orf167Q5SNV9 1468 aa28.08■■■□□ 2.09
COL6A2-208ENST00000485591 ST20-MTHFSA0A0A6YYL1 179 aa28.08■■■□□ 2.09
COL6A2-208ENST00000485591 WASLO00401 505 aaPredicted RBP28.08■■■□□ 2.09
COL6A2-208ENST00000485591 SLAIN2Q9P270 581 aa28.08■■■□□ 2.09
COL6A2-208ENST00000485591 ANKARQ7Z5J8 1434 aa28.08■■■□□ 2.09
COL6A2-208ENST00000485591 ITSN1Q15811 1721 aa28.07■■■□□ 2.08
COL6A2-208ENST00000485591 EIF4G2P78344 907 aaKnown RBP eCLIP28.05■■■□□ 2.08
COL6A2-208ENST00000485591 TOPAZ1Q8N9V7 1692 aa28.05■■■□□ 2.08
COL6A2-208ENST00000485591 TESK2Q96S53 571 aa28.04■■■□□ 2.08
COL6A2-208ENST00000485591 ATP7BP35670 1465 aa28.03■■■□□ 2.08
COL6A2-208ENST00000485591 FBXO41Q8TF61 875 aa28.03■■■□□ 2.08
COL6A2-208ENST00000485591 KIF1AQ12756 1690 aa28.03■■■□□ 2.08
COL6A2-208ENST00000485591 EVC2Q86UK5 1308 aa28.02■■■□□ 2.08
COL6A2-208ENST00000485591 CDK19Q9BWU1 502 aa28.01■■■□□ 2.07
COL6A2-208ENST00000485591 SLC24A1O60721 1099 aa28■■■□□ 2.07
COL6A2-208ENST00000485591 PIP4K2BP78356 416 aa28■■■□□ 2.07
COL6A2-208ENST00000485591 NUTM2FA1L443 756 aa27.99■■■□□ 2.07
COL6A2-208ENST00000485591 HSPA5P11021 654 aaKnown RBP27.99■■■□□ 2.07
COL6A2-208ENST00000485591 NHSL1Q5SYE7 1610 aa27.99■■■□□ 2.07
COL6A2-208ENST00000485591 PRR36Q9H6K5 1346 aa27.98■■■□□ 2.07
COL6A2-208ENST00000485591 SCAF1Q9H7N4 1312 aaKnown RBP27.97■■■□□ 2.07
COL6A2-208ENST00000485591 SRPK2P78362 688 aaKnown RBP27.96■■■□□ 2.07
COL6A2-208ENST00000485591 BRINP3Q76B58 766 aa27.96■■■□□ 2.07
COL6A2-208ENST00000485591 AHDC1Q5TGY3 1603 aaPredicted RBP27.95■■■□□ 2.06
COL6A2-208ENST00000485591 ORAI2Q96SN7 254 aa27.94■■■□□ 2.06
COL6A2-208ENST00000485591 NUDT16Q96DE0 195 aaKnown RBP27.93■■■□□ 2.06
COL6A2-208ENST00000485591 CABP2Q9NPB3 220 aa27.93■■■□□ 2.06
COL6A2-208ENST00000485591 DISP3Q9P2K9 1392 aa27.93■■■□□ 2.06
COL6A2-208ENST00000485591 TMF1P82094 1093 aa27.92■■■□□ 2.06
COL6A2-208ENST00000485591 ESCO1Q5FWF5 840 aa27.92■■■□□ 2.06
COL6A2-208ENST00000485591 PHLPP1O60346 1717 aa27.92■■■□□ 2.06
COL6A2-208ENST00000485591 ATAD2Q6PL18 1390 aa27.91■■■□□ 2.06
COL6A2-208ENST00000485591 PUS7Q96PZ0 661 aaKnown RBP27.9■■■□□ 2.06
COL6A2-208ENST00000485591 CCDC61Q9Y6R9 512 aa27.89■■■□□ 2.06
COL6A2-208ENST00000485591 PPIP5K1Q6PFW1 1433 aa27.88■■■□□ 2.05
COL6A2-208ENST00000485591 PHF8Q9UPP1 1060 aa27.88■■■□□ 2.05
COL6A2-208ENST00000485591 COL16A1Q07092 1604 aaPredicted RBP27.86■■■□□ 2.05
COL6A2-208ENST00000485591 CDCA8Q53HL2 280 aa27.84■■■□□ 2.05
COL6A2-208ENST00000485591 MYOM1P52179 1685 aa27.84■■■□□ 2.05
COL6A2-208ENST00000485591 AKAP12Q02952 1782 aa27.83■■■□□ 2.05
COL6A2-208ENST00000485591 PLEKHG3A1L390 1219 aa27.82■■■□□ 2.04
COL6A2-208ENST00000485591 NPHP3Q7Z494 1330 aa27.82■■■□□ 2.04
COL6A2-208ENST00000485591 POLR3AO14802 1390 aaPredicted RBP27.82■■■□□ 2.04
COL6A2-208ENST00000485591 PXDNQ92626 1479 aa27.82■■■□□ 2.04
COL6A2-208ENST00000485591 PMFBP1Q8TBY8 1022 aa27.81■■■□□ 2.04
COL6A2-208ENST00000485591 NINLQ9Y2I6 1382 aa27.8■■■□□ 2.04
COL6A2-208ENST00000485591 TRPM3Q9HCF6 1732 aaPredicted RBP27.79■■■□□ 2.04
COL6A2-208ENST00000485591 FOXO3O43524 673 aa27.79■■■□□ 2.04
COL6A2-208ENST00000485591 DDX17Q92841 729 aaKnown RBP27.79■■■□□ 2.04
COL6A2-208ENST00000485591 SOS2Q07890 1332 aaPredicted RBP27.78■■■□□ 2.04
COL6A2-208ENST00000485591 HSPA1LP34931 641 aa27.78■■■□□ 2.04
COL6A2-208ENST00000485591 CABP1Q9NZU7 370 aa27.78■■■□□ 2.04
COL6A2-208ENST00000485591 MON2Q7Z3U7 1717 aa27.78■■■□□ 2.04
COL6A2-208ENST00000485591 ACEP12821 1306 aa27.76■■■□□ 2.03
COL6A2-208ENST00000485591 NGDNQ8NEJ9 315 aaKnown RBP27.76■■■□□ 2.03
COL6A2-208ENST00000485591 ILDR1Q86SU0 546 aaPredicted RBP27.74■■■□□ 2.03
COL6A2-208ENST00000485591 CD163L1Q9NR16 1453 aa27.74■■■□□ 2.03
COL6A2-208ENST00000485591 CPSF1Q10570 1443 aaKnown RBP27.74■■■□□ 2.03
COL6A2-208ENST00000485591 NRKQ7Z2Y5 1582 aa27.73■■■□□ 2.03
COL6A2-208ENST00000485591 C11orf95C9JLR9 678 aaPredicted RBP27.73■■■□□ 2.03
COL6A2-208ENST00000485591 SHPRHQ149N8 1683 aa27.72■■■□□ 2.03
COL6A2-208ENST00000485591 ALS2Q96Q42 1657 aa27.72■■■□□ 2.03
COL6A2-208ENST00000485591 PSME1Q06323 249 aa27.71■■■□□ 2.03
COL6A2-208ENST00000485591 KRT28Q7Z3Y7 464 aa27.71■■■□□ 2.03
COL6A2-208ENST00000485591 TMC1Q8TDI8 760 aa27.71■■■□□ 2.03
COL6A2-208ENST00000485591 USP6P35125 1406 aa27.7■■■□□ 2.03
COL6A2-208ENST00000485591 XPCQ01831 940 aaPredicted RBP27.7■■■□□ 2.02
COL6A2-208ENST00000485591 SLC12A5Q9H2X9 1139 aa27.7■■■□□ 2.02
COL6A2-208ENST00000485591 SBNO1A3KN83 1393 aa27.7■■■□□ 2.02
COL6A2-208ENST00000485591 KIF7Q2M1P5 1343 aa27.68■■■□□ 2.02
COL6A2-208ENST00000485591 BRD4O60885 1362 aaPredicted RBP27.68■■■□□ 2.02
COL6A2-208ENST00000485591 TNS3Q68CZ2 1445 aa27.67■■■□□ 2.02
COL6A2-208ENST00000485591 LRRC59Q96AG4 307 aaKnown RBP27.67■■■□□ 2.02
COL6A2-208ENST00000485591 A0A1W2PP64 1363 aa27.67■■■□□ 2.02
COL6A2-208ENST00000485591 COL22A1Q8NFW1 1626 aaPredicted RBP27.67■■■□□ 2.02
COL6A2-208ENST00000485591 ANKRD36BQ8N2N9 1353 aa27.66■■■□□ 2.02
COL6A2-208ENST00000485591 ZNF692Q9BU19 519 aaPredicted RBP27.66■■■□□ 2.02
COL6A2-208ENST00000485591 TERF2IPQ9NYB0 399 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms