RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ZNF598Q86UK7 904 aaKnown RBP10.07□□□□□ -0.8
SMC4-215ENST00000484799 CCDC24Q8N4L8 307 aa10.07□□□□□ -0.8
SMC4-215ENST00000484799 PDE4DQ08499 809 aa10.06□□□□□ -0.8
SMC4-215ENST00000484799 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
SMC4-215ENST00000484799 LIAT1Q6ZQX7 453 aa10.06□□□□□ -0.8
SMC4-215ENST00000484799 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
SMC4-215ENST00000484799 NRG2O14511 850 aaPredicted RBP10.05□□□□□ -0.8
SMC4-215ENST00000484799 GUCA2AQ02747 115 aa10.05□□□□□ -0.8
SMC4-215ENST00000484799 PARP9Q8IXQ6 854 aa10.05□□□□□ -0.8
SMC4-215ENST00000484799 HLA-CQ95604 372 aa10.05□□□□□ -0.8
SMC4-215ENST00000484799 RPIAP49247 311 aa10.04□□□□□ -0.8
SMC4-215ENST00000484799 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
SMC4-215ENST00000484799 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
SMC4-215ENST00000484799 NDUFV2P19404 249 aa10.02□□□□□ -0.81
SMC4-215ENST00000484799 FOXC1Q12948 553 aa10.02□□□□□ -0.81
SMC4-215ENST00000484799 SYMPKQ92797 1274 aaKnown RBP10.02□□□□□ -0.81
SMC4-215ENST00000484799 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
SMC4-215ENST00000484799 MOXD2PA6NHM9 499 aa10.01□□□□□ -0.81
SMC4-215ENST00000484799 RETREG3Q86VR2 466 aa10.01□□□□□ -0.81
SMC4-215ENST00000484799 MMP16P51512 607 aa10□□□□□ -0.81
SMC4-215ENST00000484799 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
SMC4-215ENST00000484799 MS4A1P11836 297 aa9.99□□□□□ -0.81
SMC4-215ENST00000484799 PKDCCQ504Y2 493 aa9.99□□□□□ -0.81
SMC4-215ENST00000484799 PLA2G2CQ5R387 149 aa9.99□□□□□ -0.81
SMC4-215ENST00000484799 JUNDP17535 347 aa9.98□□□□□ -0.81
SMC4-215ENST00000484799 MTMR2Q13614 643 aa9.98□□□□□ -0.81
SMC4-215ENST00000484799 TRAF7Q6Q0C0 670 aa9.98□□□□□ -0.81
SMC4-215ENST00000484799 TNFRSF10AO00220 468 aa9.97□□□□□ -0.81
SMC4-215ENST00000484799 DXOO77932 396 aaKnown RBP9.97□□□□□ -0.81
SMC4-215ENST00000484799 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
SMC4-215ENST00000484799 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
SMC4-215ENST00000484799 NUTM2BA6NNL0 878 aaPredicted RBP9.96□□□□□ -0.82
SMC4-215ENST00000484799 NUTM2EB1AL46 878 aaPredicted RBP9.96□□□□□ -0.82
SMC4-215ENST00000484799 CSPP1Q1MSJ5 1256 aa9.96□□□□□ -0.82
SMC4-215ENST00000484799 NUTM2DQ5VT03 806 aaPredicted RBP9.96□□□□□ -0.82
SMC4-215ENST00000484799 NUTM2AQ8IVF1 878 aaPredicted RBP9.96□□□□□ -0.82
SMC4-215ENST00000484799 PCDHGC3Q9UN70 934 aa9.96□□□□□ -0.82
SMC4-215ENST00000484799 CYP4X1Q8N118 509 aa9.95□□□□□ -0.82
SMC4-215ENST00000484799 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
SMC4-215ENST00000484799 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
SMC4-215ENST00000484799 GJA5P36382 358 aa9.94□□□□□ -0.82
SMC4-215ENST00000484799 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
SMC4-215ENST00000484799 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
SMC4-215ENST00000484799 TTC24A2A3L6 582 aaPredicted RBP9.93□□□□□ -0.82
SMC4-215ENST00000484799 FAM187AA6NFU0 413 aa9.93□□□□□ -0.82
SMC4-215ENST00000484799 PRR20EP86478 221 aa9.93□□□□□ -0.82
SMC4-215ENST00000484799 PRR20CP86479 221 aa9.93□□□□□ -0.82
SMC4-215ENST00000484799 PRR20DP86480 221 aa9.93□□□□□ -0.82
SMC4-215ENST00000484799 PRR20BP86481 221 aa9.93□□□□□ -0.82
SMC4-215ENST00000484799 PRR20AP86496 221 aa9.93□□□□□ -0.82
SMC4-215ENST00000484799 RSBN1LQ6PCB5 846 aaPredicted RBP9.93□□□□□ -0.82
SMC4-215ENST00000484799 SPTLC1O15269 473 aa9.92□□□□□ -0.82
SMC4-215ENST00000484799 DGAT1O75907 488 aa9.92□□□□□ -0.82
SMC4-215ENST00000484799 TSC1Q92574 1164 aa9.92□□□□□ -0.82
SMC4-215ENST00000484799 TRIM32Q13049 653 aa9.91□□□□□ -0.82
SMC4-215ENST00000484799 GDF9O60383 454 aa9.9□□□□□ -0.82
SMC4-215ENST00000484799 CCNYL3P0C7X3 344 aa9.89□□□□□ -0.83
SMC4-215ENST00000484799 CTHP32929 405 aa9.89□□□□□ -0.83
SMC4-215ENST00000484799 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
SMC4-215ENST00000484799 HRCP23327 699 aa9.88□□□□□ -0.83
SMC4-215ENST00000484799 PRPF38BQ5VTL8 546 aaKnown RBP9.88□□□□□ -0.83
SMC4-215ENST00000484799 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
SMC4-215ENST00000484799 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
SMC4-215ENST00000484799 PTPRNQ16849 979 aa9.87□□□□□ -0.83
SMC4-215ENST00000484799 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
SMC4-215ENST00000484799 DESI1Q6ICB0 168 aa9.87□□□□□ -0.83
SMC4-215ENST00000484799 DDRGK1Q96HY6 314 aa9.87□□□□□ -0.83
SMC4-215ENST00000484799 PKD2L1Q9P0L9 805 aa9.87□□□□□ -0.83
SMC4-215ENST00000484799 KDM4CQ9H3R0 1056 aa9.86□□□□□ -0.83
SMC4-215ENST00000484799 WNT7AO00755 349 aa9.85□□□□□ -0.83
SMC4-215ENST00000484799 CLK2P49760 499 aaKnown RBP9.85□□□□□ -0.83
SMC4-215ENST00000484799 WNT7BP56706 349 aa9.85□□□□□ -0.83
SMC4-215ENST00000484799 RC3H1Q5TC82 1133 aaKnown RBP9.85□□□□□ -0.83
SMC4-215ENST00000484799 SNIP1Q8TAD8 396 aaKnown RBP9.85□□□□□ -0.83
SMC4-215ENST00000484799 CABLES1Q8TDN4 633 aa9.85□□□□□ -0.83
SMC4-215ENST00000484799 EVA1BQ9NVM1 165 aa9.85□□□□□ -0.83
SMC4-215ENST00000484799 KCNH2Q12809 1159 aa9.84□□□□□ -0.83
SMC4-215ENST00000484799 HELBQ8NG08 1087 aaPredicted RBP9.84□□□□□ -0.83
SMC4-215ENST00000484799 GPBP1L1Q9HC44 474 aaPredicted RBP9.84□□□□□ -0.83
SMC4-215ENST00000484799 PTCRAQ6ISU1 281 aaPredicted RBP9.82□□□□□ -0.84
SMC4-215ENST00000484799 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
SMC4-215ENST00000484799 MRGPRX2Q96LB1 330 aa9.82□□□□□ -0.84
SMC4-215ENST00000484799 UNC93B1Q9H1C4 597 aa9.82□□□□□ -0.84
SMC4-215ENST00000484799 LIMD1Q9UGP4 676 aa9.82□□□□□ -0.84
SMC4-215ENST00000484799 NEUROD2Q15784 382 aa9.81□□□□□ -0.84
SMC4-215ENST00000484799 TUSC1Q2TAM9 212 aa9.81□□□□□ -0.84
SMC4-215ENST00000484799 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
SMC4-215ENST00000484799 LYPD8Q6UX82 237 aa9.81□□□□□ -0.84
SMC4-215ENST00000484799 CFAP99D6REC4 459 aa9.8□□□□□ -0.84
SMC4-215ENST00000484799 MYT1Q01538 1121 aa9.8□□□□□ -0.84
SMC4-215ENST00000484799 SKIV2LQ15477 1246 aaKnown RBP9.8□□□□□ -0.84
SMC4-215ENST00000484799 TOR4AQ9NXH8 423 aa9.8□□□□□ -0.84
SMC4-215ENST00000484799 AGERQ15109 404 aa9.79□□□□□ -0.84
SMC4-215ENST00000484799 BAP1Q92560 729 aa9.79□□□□□ -0.84
SMC4-215ENST00000484799 FAM117AQ9C073 453 aa9.79□□□□□ -0.84
SMC4-215ENST00000484799 LILRB3O75022 631 aa9.78□□□□□ -0.84
SMC4-215ENST00000484799 QPCTQ16769 361 aa9.78□□□□□ -0.84
SMC4-215ENST00000484799 LINC01559Q495D7 138 aa9.78□□□□□ -0.84
SMC4-215ENST00000484799 WASF2Q9Y6W5 498 aa9.78□□□□□ -0.84
SMC4-215ENST00000484799 AXIN1O15169 862 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms