RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 LMTK3Q96Q04 1460 aa9.14□□□□□ -0.95
PDZRN3-209ENST00000484487 USP47Q96K76 1375 aa9.13□□□□□ -0.95
PDZRN3-209ENST00000484487 SPDYE1Q8NFV5 336 aaPredicted RBP9.13□□□□□ -0.95
PDZRN3-209ENST00000484487 TBX22Q9Y458 520 aa9.13□□□□□ -0.95
PDZRN3-209ENST00000484487 STRCQ7RTU9 1775 aa9.13□□□□□ -0.95
PDZRN3-209ENST00000484487 QRICH2Q9H0J4 1663 aa9.13□□□□□ -0.95
PDZRN3-209ENST00000484487 NPHP4O75161 1426 aaPredicted RBP9.13□□□□□ -0.95
PDZRN3-209ENST00000484487 PIK3R4Q99570 1358 aa9.12□□□□□ -0.95
PDZRN3-209ENST00000484487 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
PDZRN3-209ENST00000484487 ADAMTS13Q76LX8 1427 aa9.12□□□□□ -0.95
PDZRN3-209ENST00000484487 ASXL1Q8IXJ9 1541 aa9.11□□□□□ -0.95
PDZRN3-209ENST00000484487 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
PDZRN3-209ENST00000484487 HSPA5P11021 654 aaKnown RBP9.11□□□□□ -0.95
PDZRN3-209ENST00000484487 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
PDZRN3-209ENST00000484487 YTHDC2Q9H6S0 1430 aaKnown RBP9.11□□□□□ -0.95
PDZRN3-209ENST00000484487 LRPPRCP42704 1394 aaKnown RBP9.11□□□□□ -0.95
PDZRN3-209ENST00000484487 TMEM132EQ6IEE7 984 aa9.1□□□□□ -0.95
PDZRN3-209ENST00000484487 NCKAP5LQ9HCH0 1330 aa9.09□□□□□ -0.95
PDZRN3-209ENST00000484487 XRN1Q8IZH2 1706 aaKnown RBP9.09□□□□□ -0.95
PDZRN3-209ENST00000484487 SIRT1Q96EB6 747 aa9.09□□□□□ -0.95
PDZRN3-209ENST00000484487 SLC26A8Q96RN1 970 aa9.09□□□□□ -0.95
PDZRN3-209ENST00000484487 CPS1P31327 1500 aa9.09□□□□□ -0.95
PDZRN3-209ENST00000484487 ABCC11Q96J66 1382 aa9.09□□□□□ -0.95
PDZRN3-209ENST00000484487 TECPR2O15040 1411 aa9.08□□□□□ -0.96
PDZRN3-209ENST00000484487 ST20-MTHFSA0A0A6YYL1 179 aa9.08□□□□□ -0.96
PDZRN3-209ENST00000484487 STK26Q9P289 416 aa9.08□□□□□ -0.96
PDZRN3-209ENST00000484487 TRAK1Q9UPV9 953 aa9.08□□□□□ -0.96
PDZRN3-209ENST00000484487 METP08581 1390 aa9.08□□□□□ -0.96
PDZRN3-209ENST00000484487 CENPJQ9HC77 1338 aaPredicted RBP9.07□□□□□ -0.96
PDZRN3-209ENST00000484487 FAM135BQ49AJ0 1406 aa9.07□□□□□ -0.96
PDZRN3-209ENST00000484487 HSPA2P54652 639 aa9.07□□□□□ -0.96
PDZRN3-209ENST00000484487 CDCA8Q53HL2 280 aa9.07□□□□□ -0.96
PDZRN3-209ENST00000484487 POGKQ9P215 609 aa9.07□□□□□ -0.96
PDZRN3-209ENST00000484487 SBNO2Q9Y2G9 1366 aa9.07□□□□□ -0.96
PDZRN3-209ENST00000484487 SPDYE4A6NLX3 237 aa9.06□□□□□ -0.96
PDZRN3-209ENST00000484487 FXR2P51116 673 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDZRN3-209ENST00000484487 TMF1P82094 1093 aa9.06□□□□□ -0.96
PDZRN3-209ENST00000484487 NWD1Q149M9 1564 aa9.06□□□□□ -0.96
PDZRN3-209ENST00000484487 PTCH1Q13635 1447 aa9.05□□□□□ -0.96
PDZRN3-209ENST00000484487 HIRIP3Q9BW71 556 aaPredicted RBP9.05□□□□□ -0.96
PDZRN3-209ENST00000484487 AMOTL2Q9Y2J4 779 aa9.05□□□□□ -0.96
PDZRN3-209ENST00000484487 KCNA6P17658 529 aa9.04□□□□□ -0.96
PDZRN3-209ENST00000484487 PRAM1Q96QH2 718 aa9.04□□□□□ -0.96
PDZRN3-209ENST00000484487 PTPRUQ92729 1446 aa9.04□□□□□ -0.96
PDZRN3-209ENST00000484487 NKTRP30414 1462 aaKnown RBP9.03□□□□□ -0.96
PDZRN3-209ENST00000484487 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
PDZRN3-209ENST00000484487 TESK2Q96S53 571 aa9.03□□□□□ -0.96
PDZRN3-209ENST00000484487 STRCP1A6NGW2 1772 aa9.03□□□□□ -0.96
PDZRN3-209ENST00000484487 ADGRB2O60241 1585 aa9.03□□□□□ -0.96
PDZRN3-209ENST00000484487 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
PDZRN3-209ENST00000484487 ITSN1Q15811 1721 aa9.02□□□□□ -0.96
PDZRN3-209ENST00000484487 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.02□□□□□ -0.96
PDZRN3-209ENST00000484487 CCDC7Q96M83 1385 aa9.02□□□□□ -0.97
PDZRN3-209ENST00000484487 ROBO2Q9HCK4 1378 aa9.01□□□□□ -0.97
PDZRN3-209ENST00000484487 PRR29P0C7W0 189 aa9.01□□□□□ -0.97
PDZRN3-209ENST00000484487 NALCNQ8IZF0 1738 aa9.01□□□□□ -0.97
PDZRN3-209ENST00000484487 PRKAR2AP13861 404 aaKnown RBP9□□□□□ -0.97
PDZRN3-209ENST00000484487 SAFB2Q14151 953 aaKnown RBP eCLIP9□□□□□ -0.97
PDZRN3-209ENST00000484487 WAPLQ7Z5K2 1190 aa9□□□□□ -0.97
PDZRN3-209ENST00000484487 XIRP1Q702N8 1843 aaKnown RBP9□□□□□ -0.97
PDZRN3-209ENST00000484487 KIF7Q2M1P5 1343 aa9□□□□□ -0.97
PDZRN3-209ENST00000484487 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
PDZRN3-209ENST00000484487 MINK1Q8N4C8 1332 aaPredicted RBP9□□□□□ -0.97
PDZRN3-209ENST00000484487 FMN2Q9NZ56 1722 aa9□□□□□ -0.97
PDZRN3-209ENST00000484487 DISP3Q9P2K9 1392 aa8.99□□□□□ -0.97
PDZRN3-209ENST00000484487 RGPD8O14715 1765 aaPredicted RBP8.99□□□□□ -0.97
PDZRN3-209ENST00000484487 NCOA3Q9Y6Q9 1424 aa8.99□□□□□ -0.97
PDZRN3-209ENST00000484487 MYOM1P52179 1685 aa8.99□□□□□ -0.97
PDZRN3-209ENST00000484487 TULP4Q9NRJ4 1543 aa8.99□□□□□ -0.97
PDZRN3-209ENST00000484487 CDC42BPGQ6DT37 1551 aa8.99□□□□□ -0.97
PDZRN3-209ENST00000484487 PLEKHH1Q9ULM0 1364 aa8.99□□□□□ -0.97
PDZRN3-209ENST00000484487 C11orf95C9JLR9 678 aaPredicted RBP8.98□□□□□ -0.97
PDZRN3-209ENST00000484487 PROSER2Q86WR7 435 aaPredicted RBP8.98□□□□□ -0.97
PDZRN3-209ENST00000484487 POLR3GLQ9BT43 218 aa8.98□□□□□ -0.97
PDZRN3-209ENST00000484487 ATAD2Q6PL18 1390 aa8.98□□□□□ -0.97
PDZRN3-209ENST00000484487 NINLQ9Y2I6 1382 aa8.98□□□□□ -0.97
PDZRN3-209ENST00000484487 WASLO00401 505 aaPredicted RBP8.97□□□□□ -0.97
PDZRN3-209ENST00000484487 SRPK2P78362 688 aaKnown RBP8.97□□□□□ -0.97
PDZRN3-209ENST00000484487 CDK19Q9BWU1 502 aa8.97□□□□□ -0.97
PDZRN3-209ENST00000484487 ADGRL3Q9HAR2 1447 aa8.97□□□□□ -0.97
PDZRN3-209ENST00000484487 HAX1O00165 279 aa8.96□□□□□ -0.98
PDZRN3-209ENST00000484487 DDX10Q13206 875 aaKnown RBP8.96□□□□□ -0.98
PDZRN3-209ENST00000484487 C14orf37Q86TY3 774 aa8.96□□□□□ -0.98
PDZRN3-209ENST00000484487 TOPAZ1Q8N9V7 1692 aa8.96□□□□□ -0.98
PDZRN3-209ENST00000484487 AKAP12Q02952 1782 aa8.96□□□□□ -0.98
PDZRN3-209ENST00000484487 DIEXFQ68CQ4 756 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-209ENST00000484487 ANKARQ7Z5J8 1434 aa8.95□□□□□ -0.98
PDZRN3-209ENST00000484487 CHADLQ6NUI6 762 aa8.94□□□□□ -0.98
PDZRN3-209ENST00000484487 C19orf44Q9H6X5 657 aa8.94□□□□□ -0.98
PDZRN3-209ENST00000484487 CABP2Q9NPB3 220 aa8.94□□□□□ -0.98
PDZRN3-209ENST00000484487 DCCP43146 1447 aa8.94□□□□□ -0.98
PDZRN3-209ENST00000484487 LRRC7Q96NW7 1537 aa8.94□□□□□ -0.98
PDZRN3-209ENST00000484487 USP32Q8NFA0 1604 aa8.94□□□□□ -0.98
PDZRN3-209ENST00000484487 MON2Q7Z3U7 1717 aa8.94□□□□□ -0.98
PDZRN3-209ENST00000484487 TMC1Q8TDI8 760 aa8.93□□□□□ -0.98
PDZRN3-209ENST00000484487 NUDT16Q96DE0 195 aaKnown RBP8.93□□□□□ -0.98
PDZRN3-209ENST00000484487 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
PDZRN3-209ENST00000484487 CCDC61Q9Y6R9 512 aa8.93□□□□□ -0.98
PDZRN3-209ENST00000484487 ZNF335Q9H4Z2 1342 aaPredicted RBP8.93□□□□□ -0.98
PDZRN3-209ENST00000484487 MSH6P52701 1360 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms