RNA–Protein interactions for RNA: ENST00000484375.5

ARPC1B-218, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-218ENST00000484375 POGKQ9P215 609 aa32.14■■■□□ 2.74
ARPC1B-218ENST00000484375 CDC42BPGQ6DT37 1551 aa32.14■■■□□ 2.74
ARPC1B-218ENST00000484375 ATF3P18847 181 aa32.13■■■□□ 2.73
ARPC1B-218ENST00000484375 EIF3AQ14152 1382 aaKnown RBP32.12■■■□□ 2.73
ARPC1B-218ENST00000484375 PRAM1Q96QH2 718 aa32.12■■■□□ 2.73
ARPC1B-218ENST00000484375 WAPLQ7Z5K2 1190 aa32.11■■■□□ 2.73
ARPC1B-218ENST00000484375 PLEKHH1Q9ULM0 1364 aa32.09■■■□□ 2.73
ARPC1B-218ENST00000484375 ADGRB2O60241 1585 aa32.09■■■□□ 2.73
ARPC1B-218ENST00000484375 CARD11Q9BXL7 1154 aa32.07■■■□□ 2.72
ARPC1B-218ENST00000484375 QRICH2Q9H0J4 1663 aa32.03■■■□□ 2.72
ARPC1B-218ENST00000484375 CENPJQ9HC77 1338 aaPredicted RBP32.01■■■□□ 2.72
ARPC1B-218ENST00000484375 FMN2Q9NZ56 1722 aa32■■■□□ 2.71
ARPC1B-218ENST00000484375 SAFB2Q14151 953 aaKnown RBP eCLIP32■■■□□ 2.71
ARPC1B-218ENST00000484375 SLAIN2Q9P270 581 aa32■■■□□ 2.71
ARPC1B-218ENST00000484375 MST1RQ04912 1400 aa31.99■■■□□ 2.71
ARPC1B-218ENST00000484375 ROBO1Q9Y6N7 1651 aa31.97■■■□□ 2.71
ARPC1B-218ENST00000484375 SCAF1Q9H7N4 1312 aaKnown RBP31.97■■■□□ 2.71
ARPC1B-218ENST00000484375 PIP4K2BP78356 416 aa31.96■■■□□ 2.71
ARPC1B-218ENST00000484375 MINK1Q8N4C8 1332 aaPredicted RBP31.94■■■□□ 2.7
ARPC1B-218ENST00000484375 C1orf167Q5SNV9 1468 aa31.92■■■□□ 2.7
ARPC1B-218ENST00000484375 SBNO2Q9Y2G9 1366 aa31.91■■■□□ 2.7
ARPC1B-218ENST00000484375 ANKARQ7Z5J8 1434 aa31.9■■■□□ 2.7
ARPC1B-218ENST00000484375 TULP4Q9NRJ4 1543 aa31.89■■■□□ 2.7
ARPC1B-218ENST00000484375 HIRIP3Q9BW71 556 aaPredicted RBP31.88■■■□□ 2.69
ARPC1B-218ENST00000484375 USP47Q96K76 1375 aa31.87■■■□□ 2.69
ARPC1B-218ENST00000484375 WASLO00401 505 aaPredicted RBP31.87■■■□□ 2.69
ARPC1B-218ENST00000484375 SLC24A1O60721 1099 aa31.87■■■□□ 2.69
ARPC1B-218ENST00000484375 ITSN1Q15811 1721 aa31.86■■■□□ 2.69
ARPC1B-218ENST00000484375 KIF1AQ12756 1690 aa31.86■■■□□ 2.69
ARPC1B-218ENST00000484375 RGPD8O14715 1765 aaPredicted RBP31.82■■■□□ 2.68
ARPC1B-218ENST00000484375 USP32Q8NFA0 1604 aa31.82■■■□□ 2.68
ARPC1B-218ENST00000484375 EVC2Q86UK5 1308 aa31.81■■■□□ 2.68
ARPC1B-218ENST00000484375 BRINP3Q76B58 766 aa31.81■■■□□ 2.68
ARPC1B-218ENST00000484375 NHSL1Q5SYE7 1610 aa31.81■■■□□ 2.68
ARPC1B-218ENST00000484375 AHDC1Q5TGY3 1603 aaPredicted RBP31.81■■■□□ 2.68
ARPC1B-218ENST00000484375 ILDR1Q86SU0 546 aaPredicted RBP31.8■■■□□ 2.68
ARPC1B-218ENST00000484375 PHLPP1O60346 1717 aa31.78■■■□□ 2.68
ARPC1B-218ENST00000484375 CDK19Q9BWU1 502 aa31.78■■■□□ 2.68
ARPC1B-218ENST00000484375 ESCO1Q5FWF5 840 aa31.77■■■□□ 2.68
ARPC1B-218ENST00000484375 ATP7BP35670 1465 aa31.77■■■□□ 2.68
ARPC1B-218ENST00000484375 ST20-MTHFSA0A0A6YYL1 179 aa31.76■■■□□ 2.67
ARPC1B-218ENST00000484375 NUTM2FA1L443 756 aa31.76■■■□□ 2.67
ARPC1B-218ENST00000484375 TOPAZ1Q8N9V7 1692 aa31.76■■■□□ 2.67
ARPC1B-218ENST00000484375 SRPK2P78362 688 aaKnown RBP31.74■■■□□ 2.67
ARPC1B-218ENST00000484375 ORAI2Q96SN7 254 aa31.73■■■□□ 2.67
ARPC1B-218ENST00000484375 EIF4G2P78344 907 aaKnown RBP eCLIP31.72■■■□□ 2.677e-8■■■■■ 27.1
ARPC1B-218ENST00000484375 NUDT16Q96DE0 195 aaKnown RBP31.7■■■□□ 2.67
ARPC1B-218ENST00000484375 NPHP3Q7Z494 1330 aa31.7■■■□□ 2.66
ARPC1B-218ENST00000484375 COL16A1Q07092 1604 aaPredicted RBP31.69■■■□□ 2.66
ARPC1B-218ENST00000484375 HSPA1LP34931 641 aa31.69■■■□□ 2.66
ARPC1B-218ENST00000484375 PHF8Q9UPP1 1060 aa31.69■■■□□ 2.66
ARPC1B-218ENST00000484375 PRR36Q9H6K5 1346 aa31.69■■■□□ 2.66
ARPC1B-218ENST00000484375 ATAD2Q6PL18 1390 aa31.68■■■□□ 2.66
ARPC1B-218ENST00000484375 ZEB1P37275 1124 aaPredicted RBP31.68■■■□□ 2.66
ARPC1B-218ENST00000484375 TESK2Q96S53 571 aa31.68■■■□□ 2.66
ARPC1B-218ENST00000484375 CCDC61Q9Y6R9 512 aa31.68■■■□□ 2.66
ARPC1B-218ENST00000484375 PUS7Q96PZ0 661 aaKnown RBP31.66■■■□□ 2.66
ARPC1B-218ENST00000484375 TMF1P82094 1093 aa31.65■■■□□ 2.66
ARPC1B-218ENST00000484375 CABP2Q9NPB3 220 aa31.65■■■□□ 2.66
ARPC1B-218ENST00000484375 CDCA8Q53HL2 280 aa31.62■■■□□ 2.65
ARPC1B-218ENST00000484375 PPIP5K1Q6PFW1 1433 aa31.62■■■□□ 2.65
ARPC1B-218ENST00000484375 FOXO3O43524 673 aa31.6■■■□□ 2.65
ARPC1B-218ENST00000484375 PXDNQ92626 1479 aa31.59■■■□□ 2.65
ARPC1B-218ENST00000484375 SOS2Q07890 1332 aaPredicted RBP31.59■■■□□ 2.65
ARPC1B-218ENST00000484375 HSPA5P11021 654 aaKnown RBP31.59■■■□□ 2.65
ARPC1B-218ENST00000484375 PLEKHG3A1L390 1219 aa31.58■■■□□ 2.65
ARPC1B-218ENST00000484375 NGDNQ8NEJ9 315 aaKnown RBP31.57■■■□□ 2.64
ARPC1B-218ENST00000484375 PMFBP1Q8TBY8 1022 aa31.57■■■□□ 2.64
ARPC1B-218ENST00000484375 LRRC59Q96AG4 307 aaKnown RBP31.57■■■□□ 2.64
ARPC1B-218ENST00000484375 SHPRHQ149N8 1683 aa31.57■■■□□ 2.64
ARPC1B-218ENST00000484375 POLR3AO14802 1390 aaPredicted RBP31.56■■■□□ 2.64
ARPC1B-218ENST00000484375 PSME1Q06323 249 aa31.56■■■□□ 2.64
ARPC1B-218ENST00000484375 NINLQ9Y2I6 1382 aa31.56■■■□□ 2.64
ARPC1B-218ENST00000484375 JCADQ9P266 1359 aa31.55■■■□□ 2.64
ARPC1B-218ENST00000484375 DDX17Q92841 729 aaKnown RBP31.54■■■□□ 2.64
ARPC1B-218ENST00000484375 DISP3Q9P2K9 1392 aa31.54■■■□□ 2.64
ARPC1B-218ENST00000484375 KRT28Q7Z3Y7 464 aa31.51■■■□□ 2.63
ARPC1B-218ENST00000484375 SBNO1A3KN83 1393 aa31.51■■■□□ 2.63
ARPC1B-218ENST00000484375 ACEP12821 1306 aa31.5■■■□□ 2.63
ARPC1B-218ENST00000484375 TRPM3Q9HCF6 1732 aaPredicted RBP31.5■■■□□ 2.63
ARPC1B-218ENST00000484375 CABP1Q9NZU7 370 aa31.5■■■□□ 2.63
ARPC1B-218ENST00000484375 BRD4O60885 1362 aaPredicted RBP31.5■■■□□ 2.63
ARPC1B-218ENST00000484375 AKAP12Q02952 1782 aa31.5■■■□□ 2.63
ARPC1B-218ENST00000484375 TNS3Q68CZ2 1445 aa31.47■■■□□ 2.63
ARPC1B-218ENST00000484375 COL22A1Q8NFW1 1626 aaPredicted RBP31.46■■■□□ 2.63
ARPC1B-218ENST00000484375 XPCQ01831 940 aaPredicted RBP31.45■■■□□ 2.63
ARPC1B-218ENST00000484375 ZNF692Q9BU19 519 aaPredicted RBP31.45■■■□□ 2.63
ARPC1B-218ENST00000484375 MON2Q7Z3U7 1717 aa31.44■■■□□ 2.62
ARPC1B-218ENST00000484375 ARHGEF10O15013 1369 aa31.43■■■□□ 2.62
ARPC1B-218ENST00000484375 TMC1Q8TDI8 760 aa31.43■■■□□ 2.62
ARPC1B-218ENST00000484375 ALS2Q96Q42 1657 aa31.43■■■□□ 2.62
ARPC1B-218ENST00000484375 SPATA31A6Q5VVP1 1343 aa31.43■■■□□ 2.62
ARPC1B-218ENST00000484375 SPATA31A3Q5VYP0 1347 aa31.43■■■□□ 2.62
ARPC1B-218ENST00000484375 PNPLA6Q8IY17 1366 aa31.43■■■□□ 2.62
ARPC1B-218ENST00000484375 USP6P35125 1406 aa31.41■■■□□ 2.62
ARPC1B-218ENST00000484375 TERF2IPQ9NYB0 399 aa31.41■■■□□ 2.62
ARPC1B-218ENST00000484375 CPSF1Q10570 1443 aaKnown RBP31.41■■■□□ 2.62
ARPC1B-218ENST00000484375 HDGFL2Q7Z4V5 671 aaPredicted RBP31.4■■■□□ 2.62
ARPC1B-218ENST00000484375 MYOM1P52179 1685 aa31.4■■■□□ 2.62
ARPC1B-218ENST00000484375 NRKQ7Z2Y5 1582 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms