RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 PRDM9Q9NQV7 894 aa9.52□□□□□ -0.89
SSBP1-211ENST00000484178 AAASQ9NRG9 546 aa9.52□□□□□ -0.89
SSBP1-211ENST00000484178 KDM4AO75164 1064 aa9.51□□□□□ -0.89
SSBP1-211ENST00000484178 FOXC1Q12948 553 aa9.51□□□□□ -0.89
SSBP1-211ENST00000484178 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
SSBP1-211ENST00000484178 POTECB2RU33 542 aa9.48□□□□□ -0.89
SSBP1-211ENST00000484178 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-211ENST00000484178 CTC1Q2NKJ3 1217 aa9.48□□□□□ -0.89
SSBP1-211ENST00000484178 USB1Q9BQ65 265 aaKnown RBP9.48□□□□□ -0.89
SSBP1-211ENST00000484178 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
SSBP1-211ENST00000484178 WNT7AO00755 349 aa9.46□□□□□ -0.9
SSBP1-211ENST00000484178 MDM2Q00987 491 aaPredicted RBP9.46□□□□□ -0.9
SSBP1-211ENST00000484178 CYP4X1Q8N118 509 aa9.46□□□□□ -0.9
SSBP1-211ENST00000484178 ST8SIA5O15466 376 aa9.45□□□□□ -0.9
SSBP1-211ENST00000484178 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
SSBP1-211ENST00000484178 HOXA2O43364 376 aa9.44□□□□□ -0.9
SSBP1-211ENST00000484178 TRIM32Q13049 653 aa9.44□□□□□ -0.9
SSBP1-211ENST00000484178 GPCPD1Q9NPB8 672 aa9.44□□□□□ -0.9
SSBP1-211ENST00000484178 CLCN1P35523 988 aa9.43□□□□□ -0.9
SSBP1-211ENST00000484178 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
SSBP1-211ENST00000484178 AXIN1O15169 862 aa9.41□□□□□ -0.9
SSBP1-211ENST00000484178 SNIP1Q8TAD8 396 aaKnown RBP9.41□□□□□ -0.9
SSBP1-211ENST00000484178 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
SSBP1-211ENST00000484178 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
SSBP1-211ENST00000484178 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
SSBP1-211ENST00000484178 TTC24A2A3L6 582 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-211ENST00000484178 HLA-CQ95604 372 aa9.39□□□□□ -0.91
SSBP1-211ENST00000484178 SMPD1P17405 629 aa9.38□□□□□ -0.91
SSBP1-211ENST00000484178 WNT7BP56706 349 aa9.38□□□□□ -0.91
SSBP1-211ENST00000484178 DACH1Q9UI36 760 aa9.38□□□□□ -0.91
SSBP1-211ENST00000484178 RETREG3Q86VR2 466 aa9.37□□□□□ -0.91
SSBP1-211ENST00000484178 MRGPRX2Q96LB1 330 aa9.37□□□□□ -0.91
SSBP1-211ENST00000484178 JUNDP17535 347 aa9.36□□□□□ -0.91
SSBP1-211ENST00000484178 TREML4Q6UXN2 200 aa9.36□□□□□ -0.91
SSBP1-211ENST00000484178 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
SSBP1-211ENST00000484178 SKOR1P84550 965 aa9.34□□□□□ -0.91
SSBP1-211ENST00000484178 GUCA2AQ02747 115 aa9.34□□□□□ -0.91
SSBP1-211ENST00000484178 GMPR2Q9P2T1 348 aaKnown RBP9.34□□□□□ -0.91
SSBP1-211ENST00000484178 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
SSBP1-211ENST00000484178 J3QL48 77 aa9.32□□□□□ -0.92
SSBP1-211ENST00000484178 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
SSBP1-211ENST00000484178 CCDC24Q8N4L8 307 aa9.32□□□□□ -0.92
SSBP1-211ENST00000484178 KRI1Q8N9T8 703 aaKnown RBP9.32□□□□□ -0.92
SSBP1-211ENST00000484178 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-211ENST00000484178 FDX1P10109 184 aa9.31□□□□□ -0.92
SSBP1-211ENST00000484178 SSTR3P32745 418 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-211ENST00000484178 AMHR2Q16671 573 aa9.31□□□□□ -0.92
SSBP1-211ENST00000484178 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
SSBP1-211ENST00000484178 PCDHGC3Q9UN70 934 aa9.31□□□□□ -0.92
SSBP1-211ENST00000484178 ZMYND10O75800 440 aa9.3□□□□□ -0.92
SSBP1-211ENST00000484178 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
SSBP1-211ENST00000484178 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
SSBP1-211ENST00000484178 SPIRE2Q8WWL2 714 aa9.29□□□□□ -0.92
SSBP1-211ENST00000484178 SIAH2O43255 324 aa9.28□□□□□ -0.92
SSBP1-211ENST00000484178 SENP2Q9HC62 589 aa9.28□□□□□ -0.92
SSBP1-211ENST00000484178 GJA5P36382 358 aa9.27□□□□□ -0.93
SSBP1-211ENST00000484178 PTCRAQ6ISU1 281 aaPredicted RBP9.27□□□□□ -0.93
SSBP1-211ENST00000484178 HPS1Q92902 700 aa9.27□□□□□ -0.93
SSBP1-211ENST00000484178 TRIM47Q96LD4 638 aa9.27□□□□□ -0.93
SSBP1-211ENST00000484178 SPDYE5A6NIY4 337 aa9.26□□□□□ -0.93
SSBP1-211ENST00000484178 CCNYL3P0C7X3 344 aa9.26□□□□□ -0.93
SSBP1-211ENST00000484178 NFX1Q12986 1120 aaKnown RBP9.26□□□□□ -0.93
SSBP1-211ENST00000484178 PTPRNQ16849 979 aa9.26□□□□□ -0.93
SSBP1-211ENST00000484178 DESI1Q6ICB0 168 aa9.26□□□□□ -0.93
SSBP1-211ENST00000484178 C6orf229H3BNL8 230 aa9.25□□□□□ -0.93
SSBP1-211ENST00000484178 WFS1O76024 890 aa9.25□□□□□ -0.93
SSBP1-211ENST00000484178 MS4A1P11836 297 aa9.25□□□□□ -0.93
SSBP1-211ENST00000484178 EVA1BQ9NVM1 165 aa9.25□□□□□ -0.93
SSBP1-211ENST00000484178 ZC3H15Q8WU90 426 aaKnown RBP9.24□□□□□ -0.93
SSBP1-211ENST00000484178 KIFC2Q96AC6 838 aa9.24□□□□□ -0.93
SSBP1-211ENST00000484178 MOXD2PA6NHM9 499 aa9.23□□□□□ -0.93
SSBP1-211ENST00000484178 DIXDC1Q155Q3 683 aa9.23□□□□□ -0.93
SSBP1-211ENST00000484178 WIPF1O43516 503 aa9.22□□□□□ -0.93
SSBP1-211ENST00000484178 SH3BP2P78314 561 aa9.22□□□□□ -0.93
SSBP1-211ENST00000484178 TTLL12Q14166 644 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-211ENST00000484178 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
SSBP1-211ENST00000484178 EHBP1Q8NDI1 1231 aa9.22□□□□□ -0.93
SSBP1-211ENST00000484178 ALDH1A1P00352 501 aa9.21□□□□□ -0.94
SSBP1-211ENST00000484178 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
SSBP1-211ENST00000484178 NDUFV2P19404 249 aa9.21□□□□□ -0.94
SSBP1-211ENST00000484178 MTMR2Q13614 643 aa9.21□□□□□ -0.94
SSBP1-211ENST00000484178 MPNDQ8N594 471 aa9.21□□□□□ -0.94
SSBP1-211ENST00000484178 KCNH2Q12809 1159 aa9.2□□□□□ -0.94
SSBP1-211ENST00000484178 PRR7Q8TB68 274 aa9.2□□□□□ -0.94
SSBP1-211ENST00000484178 UNC93B1Q9H1C4 597 aa9.2□□□□□ -0.94
SSBP1-211ENST00000484178 BEGAINQ9BUH8 593 aa9.19□□□□□ -0.94
SSBP1-211ENST00000484178 NISCHQ9Y2I1 1504 aa9.19□□□□□ -0.94
SSBP1-211ENST00000484178 TERTO14746 1132 aaKnown RBP9.18□□□□□ -0.94
SSBP1-211ENST00000484178 VARSP26640 1264 aaKnown RBP9.16□□□□□ -0.94
SSBP1-211ENST00000484178 RSBN1LQ6PCB5 846 aaPredicted RBP9.16□□□□□ -0.94
SSBP1-211ENST00000484178 PARP9Q8IXQ6 854 aa9.16□□□□□ -0.94
SSBP1-211ENST00000484178 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
SSBP1-211ENST00000484178 TBC1D2Q9BYX2 928 aa9.16□□□□□ -0.94
SSBP1-211ENST00000484178 WASF2Q9Y6W5 498 aa9.16□□□□□ -0.94
SSBP1-211ENST00000484178 SPTLC1O15269 473 aa9.15□□□□□ -0.94
SSBP1-211ENST00000484178 LYPD8Q6UX82 237 aa9.15□□□□□ -0.94
SSBP1-211ENST00000484178 BAP1Q92560 729 aa9.15□□□□□ -0.94
SSBP1-211ENST00000484178 PLEKHG3A1L390 1219 aa9.14□□□□□ -0.95
SSBP1-211ENST00000484178 TRIM66O15016 1216 aa9.14□□□□□ -0.95
SSBP1-211ENST00000484178 CAPN5O15484 640 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms