RNA–Protein interactions for RNA: ENST00000483797.1

PNKD-207, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-207ENST00000483797 SIRT1Q96EB6 747 aa20.77■□□□□ 0.92
PNKD-207ENST00000483797 CENPJQ9HC77 1338 aaPredicted RBP20.76■□□□□ 0.91
PNKD-207ENST00000483797 ADGRB2O60241 1585 aa20.75■□□□□ 0.91
PNKD-207ENST00000483797 CDC42BPGQ6DT37 1551 aa20.75■□□□□ 0.91
PNKD-207ENST00000483797 MSH6P52701 1360 aa20.74■□□□□ 0.91
PNKD-207ENST00000483797 FMN2Q9NZ56 1722 aa20.74■□□□□ 0.91
PNKD-207ENST00000483797 NCOA3Q9Y6Q9 1424 aa20.74■□□□□ 0.91
PNKD-207ENST00000483797 IQSEC2Q5JU85 1478 aa20.74■□□□□ 0.91
PNKD-207ENST00000483797 TULP4Q9NRJ4 1543 aa20.73■□□□□ 0.91
PNKD-207ENST00000483797 RGPD8O14715 1765 aaPredicted RBP20.73■□□□□ 0.91
PNKD-207ENST00000483797 ST20-MTHFSA0A0A6YYL1 179 aa20.72■□□□□ 0.91
PNKD-207ENST00000483797 C19orf44Q9H6X5 657 aa20.72■□□□□ 0.91
PNKD-207ENST00000483797 USP32Q8NFA0 1604 aa20.71■□□□□ 0.91
PNKD-207ENST00000483797 NUTM2FA1L443 756 aa20.71■□□□□ 0.91
PNKD-207ENST00000483797 EIF3AQ14152 1382 aaKnown RBP20.71■□□□□ 0.91
PNKD-207ENST00000483797 UBAP1LF5GYI3 381 aa20.69■□□□□ 0.9
PNKD-207ENST00000483797 HSPA5P11021 654 aaKnown RBP20.69■□□□□ 0.9
PNKD-207ENST00000483797 MST1RQ04912 1400 aa20.69■□□□□ 0.9
PNKD-207ENST00000483797 TESK2Q96S53 571 aa20.68■□□□□ 0.9
PNKD-207ENST00000483797 DCCP43146 1447 aa20.68■□□□□ 0.9
PNKD-207ENST00000483797 ATF3P18847 181 aa20.66■□□□□ 0.9
PNKD-207ENST00000483797 PRR36Q9H6K5 1346 aa20.65■□□□□ 0.9
PNKD-207ENST00000483797 C1orf167Q5SNV9 1468 aa20.64■□□□□ 0.89
PNKD-207ENST00000483797 WASLO00401 505 aaPredicted RBP20.64■□□□□ 0.89
PNKD-207ENST00000483797 PIP4K2BP78356 416 aa20.64■□□□□ 0.89
PNKD-207ENST00000483797 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.89
PNKD-207ENST00000483797 DISP3Q9P2K9 1392 aa20.63■□□□□ 0.89
PNKD-207ENST00000483797 CADPS2Q86UW7 1296 aa20.63■□□□□ 0.89
PNKD-207ENST00000483797 CDK19Q9BWU1 502 aa20.63■□□□□ 0.89
PNKD-207ENST00000483797 SLAIN2Q9P270 581 aa20.63■□□□□ 0.89
PNKD-207ENST00000483797 SBNO2Q9Y2G9 1366 aa20.62■□□□□ 0.89
PNKD-207ENST00000483797 ZEB1P37275 1124 aaPredicted RBP20.62■□□□□ 0.89
PNKD-207ENST00000483797 EIF4G2P78344 907 aaKnown RBP eCLIP20.62■□□□□ 0.89
PNKD-207ENST00000483797 CABP2Q9NPB3 220 aa20.62■□□□□ 0.89
PNKD-207ENST00000483797 ATP7BP35670 1465 aa20.62■□□□□ 0.89
PNKD-207ENST00000483797 TOPAZ1Q8N9V7 1692 aa20.61■□□□□ 0.89
PNKD-207ENST00000483797 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
PNKD-207ENST00000483797 ORAI2Q96SN7 254 aa20.61■□□□□ 0.89
PNKD-207ENST00000483797 TOM1O60784 492 aa20.59■□□□□ 0.89
PNKD-207ENST00000483797 DDX17Q92841 729 aaKnown RBP20.58■□□□□ 0.89
PNKD-207ENST00000483797 EVC2Q86UK5 1308 aa20.57■□□□□ 0.88
PNKD-207ENST00000483797 SRPK2P78362 688 aaKnown RBP20.57■□□□□ 0.88
PNKD-207ENST00000483797 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
PNKD-207ENST00000483797 ANKARQ7Z5J8 1434 aa20.56■□□□□ 0.88
PNKD-207ENST00000483797 C11orf95C9JLR9 678 aaPredicted RBP20.56■□□□□ 0.88
PNKD-207ENST00000483797 NUDT16Q96DE0 195 aaKnown RBP20.56■□□□□ 0.88
PNKD-207ENST00000483797 ITSN1Q15811 1721 aa20.56■□□□□ 0.88
PNKD-207ENST00000483797 ESCO1Q5FWF5 840 aa20.54■□□□□ 0.88
PNKD-207ENST00000483797 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
PNKD-207ENST00000483797 NHSL1Q5SYE7 1610 aa20.53■□□□□ 0.88
PNKD-207ENST00000483797 MYOM1P52179 1685 aa20.52■□□□□ 0.88
PNKD-207ENST00000483797 KIF1AQ12756 1690 aa20.51■□□□□ 0.87
PNKD-207ENST00000483797 XPCQ01831 940 aaPredicted RBP20.5■□□□□ 0.87
PNKD-207ENST00000483797 FBXO41Q8TF61 875 aa20.5■□□□□ 0.87
PNKD-207ENST00000483797 PPIP5K1Q6PFW1 1433 aa20.5■□□□□ 0.87
PNKD-207ENST00000483797 PHLPP1O60346 1717 aa20.5■□□□□ 0.87
PNKD-207ENST00000483797 TMF1P82094 1093 aa20.49■□□□□ 0.87
PNKD-207ENST00000483797 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
PNKD-207ENST00000483797 AHDC1Q5TGY3 1603 aaPredicted RBP20.48■□□□□ 0.87
PNKD-207ENST00000483797 COL16A1Q07092 1604 aaPredicted RBP20.47■□□□□ 0.87
PNKD-207ENST00000483797 FOXO3O43524 673 aa20.47■□□□□ 0.87
PNKD-207ENST00000483797 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
PNKD-207ENST00000483797 CABP1Q9NZU7 370 aa20.47■□□□□ 0.87
PNKD-207ENST00000483797 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
PNKD-207ENST00000483797 AKAP12Q02952 1782 aa20.46■□□□□ 0.87
PNKD-207ENST00000483797 PXDNQ92626 1479 aa20.45■□□□□ 0.86
PNKD-207ENST00000483797 HSPA1LP34931 641 aa20.45■□□□□ 0.86
PNKD-207ENST00000483797 SLC12A5Q9H2X9 1139 aa20.45■□□□□ 0.86
PNKD-207ENST00000483797 ATAD2Q6PL18 1390 aa20.45■□□□□ 0.86
PNKD-207ENST00000483797 CD163L1Q9NR16 1453 aa20.44■□□□□ 0.86
PNKD-207ENST00000483797 TMC1Q8TDI8 760 aa20.44■□□□□ 0.86
PNKD-207ENST00000483797 ACEP12821 1306 aa20.44■□□□□ 0.86
PNKD-207ENST00000483797 KIF7Q2M1P5 1343 aa20.44■□□□□ 0.86
PNKD-207ENST00000483797 TRPM3Q9HCF6 1732 aaPredicted RBP20.44■□□□□ 0.86
PNKD-207ENST00000483797 PLEKHG3A1L390 1219 aa20.42■□□□□ 0.86
PNKD-207ENST00000483797 ILDR1Q86SU0 546 aaPredicted RBP20.41■□□□□ 0.86
PNKD-207ENST00000483797 NGDNQ8NEJ9 315 aaKnown RBP20.41■□□□□ 0.86
PNKD-207ENST00000483797 WASHC2AQ641Q2 1341 aa20.41■□□□□ 0.86
PNKD-207ENST00000483797 POLR3AO14802 1390 aaPredicted RBP20.41■□□□□ 0.86
PNKD-207ENST00000483797 MON2Q7Z3U7 1717 aa20.41■□□□□ 0.86
PNKD-207ENST00000483797 CCDC7Q96M83 1385 aa20.4■□□□□ 0.86
PNKD-207ENST00000483797 NRKQ7Z2Y5 1582 aa20.39■□□□□ 0.85
PNKD-207ENST00000483797 PUS7Q96PZ0 661 aaKnown RBP20.39■□□□□ 0.85
PNKD-207ENST00000483797 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
PNKD-207ENST00000483797 NPHP3Q7Z494 1330 aa20.38■□□□□ 0.85
PNKD-207ENST00000483797 KRT28Q7Z3Y7 464 aa20.38■□□□□ 0.85
PNKD-207ENST00000483797 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
PNKD-207ENST00000483797 A0A1W2PP64 1363 aa20.37■□□□□ 0.85
PNKD-207ENST00000483797 ALS2Q96Q42 1657 aa20.36■□□□□ 0.85
PNKD-207ENST00000483797 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
PNKD-207ENST00000483797 PSME1Q06323 249 aa20.36■□□□□ 0.85
PNKD-207ENST00000483797 CDCA8Q53HL2 280 aa20.36■□□□□ 0.85
PNKD-207ENST00000483797 USP6P35125 1406 aa20.36■□□□□ 0.85
PNKD-207ENST00000483797 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
PNKD-207ENST00000483797 SSH2Q76I76 1423 aa20.33■□□□□ 0.84
PNKD-207ENST00000483797 PIK3C2AO00443 1686 aa20.32■□□□□ 0.84
PNKD-207ENST00000483797 PLEKHG5O94827 1062 aa20.32■□□□□ 0.84
PNKD-207ENST00000483797 ANKRD36BQ8N2N9 1353 aa20.32■□□□□ 0.84
PNKD-207ENST00000483797 NINLQ9Y2I6 1382 aa20.32■□□□□ 0.84
PNKD-207ENST00000483797 MARF1Q9Y4F3 1742 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms