RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
COL2A1-206ENST00000483376 GPRASP1Q5JY77 1395 aa23.33■■□□□ 1.33
COL2A1-206ENST00000483376 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.33
COL2A1-206ENST00000483376 PRAM1Q96QH2 718 aa23.33■■□□□ 1.33
COL2A1-206ENST00000483376 TRAK1Q9UPV9 953 aa23.33■■□□□ 1.33
COL2A1-206ENST00000483376 ROBO1Q9Y6N7 1651 aa23.32■■□□□ 1.32
COL2A1-206ENST00000483376 ADGRB2O60241 1585 aa23.32■■□□□ 1.32
COL2A1-206ENST00000483376 ARHGEF28Q8N1W1 1705 aaKnown RBP23.31■■□□□ 1.32
COL2A1-206ENST00000483376 NBPF8Q3BBV2 869 aa23.3■■□□□ 1.32
COL2A1-206ENST00000483376 C1orf167Q5SNV9 1468 aa23.3■■□□□ 1.32
COL2A1-206ENST00000483376 POGKQ9P215 609 aa23.29■■□□□ 1.32
COL2A1-206ENST00000483376 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
COL2A1-206ENST00000483376 HSPA1LP34931 641 aa23.28■■□□□ 1.32
COL2A1-206ENST00000483376 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
COL2A1-206ENST00000483376 ROCK2O75116 1388 aaKnown RBP23.27■■□□□ 1.32
COL2A1-206ENST00000483376 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
COL2A1-206ENST00000483376 AHDC1Q5TGY3 1603 aaPredicted RBP23.26■■□□□ 1.31
COL2A1-206ENST00000483376 FMN2Q9NZ56 1722 aa23.25■■□□□ 1.31
COL2A1-206ENST00000483376 EIF3AQ14152 1382 aaKnown RBP23.23■■□□□ 1.31
COL2A1-206ENST00000483376 ANKARQ7Z5J8 1434 aa23.22■■□□□ 1.31
COL2A1-206ENST00000483376 CENPJQ9HC77 1338 aaPredicted RBP23.2■■□□□ 1.3
COL2A1-206ENST00000483376 SAFB2Q14151 953 aaKnown RBP eCLIP23.2■■□□□ 1.3
COL2A1-206ENST00000483376 NHSL1Q5SYE7 1610 aa23.19■■□□□ 1.3
COL2A1-206ENST00000483376 MINK1Q8N4C8 1332 aaPredicted RBP23.17■■□□□ 1.3
COL2A1-206ENST00000483376 WASLO00401 505 aaPredicted RBP23.17■■□□□ 1.3
COL2A1-206ENST00000483376 COL16A1Q07092 1604 aaPredicted RBP23.17■■□□□ 1.3
COL2A1-206ENST00000483376 TULP4Q9NRJ4 1543 aa23.17■■□□□ 1.3
COL2A1-206ENST00000483376 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
COL2A1-206ENST00000483376 CARD11Q9BXL7 1154 aa23.16■■□□□ 1.3
COL2A1-206ENST00000483376 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
COL2A1-206ENST00000483376 SBNO2Q9Y2G9 1366 aa23.15■■□□□ 1.3
COL2A1-206ENST00000483376 KIF1AQ12756 1690 aa23.13■■□□□ 1.29
COL2A1-206ENST00000483376 HIRIP3Q9BW71 556 aaPredicted RBP23.13■■□□□ 1.29
COL2A1-206ENST00000483376 USP32Q8NFA0 1604 aa23.12■■□□□ 1.29
COL2A1-206ENST00000483376 ESCO1Q5FWF5 840 aa23.12■■□□□ 1.29
COL2A1-206ENST00000483376 QRICH2Q9H0J4 1663 aa23.12■■□□□ 1.29
COL2A1-206ENST00000483376 SOS2Q07890 1332 aaPredicted RBP23.11■■□□□ 1.29
COL2A1-206ENST00000483376 NPHP3Q7Z494 1330 aa23.11■■□□□ 1.29
COL2A1-206ENST00000483376 JCADQ9P266 1359 aa23.11■■□□□ 1.29
COL2A1-206ENST00000483376 ATP7BP35670 1465 aa23.1■■□□□ 1.29
COL2A1-206ENST00000483376 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.29
COL2A1-206ENST00000483376 NUTM2FA1L443 756 aa23.08■■□□□ 1.29
COL2A1-206ENST00000483376 LRRC59Q96AG4 307 aaKnown RBP23.07■■□□□ 1.28
COL2A1-206ENST00000483376 CDK19Q9BWU1 502 aa23.07■■□□□ 1.28
COL2A1-206ENST00000483376 PHF8Q9UPP1 1060 aa23.07■■□□□ 1.28
COL2A1-206ENST00000483376 PXDNQ92626 1479 aa23.06■■□□□ 1.28
COL2A1-206ENST00000483376 SHPRHQ149N8 1683 aa23.05■■□□□ 1.28
COL2A1-206ENST00000483376 SLC24A1O60721 1099 aa23.04■■□□□ 1.28
COL2A1-206ENST00000483376 NUDT16Q96DE0 195 aaKnown RBP23.04■■□□□ 1.28
COL2A1-206ENST00000483376 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
COL2A1-206ENST00000483376 RGPD8O14715 1765 aaPredicted RBP23.04■■□□□ 1.28
COL2A1-206ENST00000483376 ITSN1Q15811 1721 aa23.03■■□□□ 1.28
COL2A1-206ENST00000483376 FOXO3O43524 673 aa23.03■■□□□ 1.28
COL2A1-206ENST00000483376 CCDC61Q9Y6R9 512 aa23.03■■□□□ 1.28
COL2A1-206ENST00000483376 SPATA31A6Q5VVP1 1343 aa23.03■■□□□ 1.28
COL2A1-206ENST00000483376 TOPAZ1Q8N9V7 1692 aa23.03■■□□□ 1.28
COL2A1-206ENST00000483376 DDX17Q92841 729 aaKnown RBP23.02■■□□□ 1.28
COL2A1-206ENST00000483376 PNPLA6Q8IY17 1366 aa23■■□□□ 1.27
COL2A1-206ENST00000483376 USP47Q96K76 1375 aa23■■□□□ 1.27
COL2A1-206ENST00000483376 PLEKHG3A1L390 1219 aa22.99■■□□□ 1.27
COL2A1-206ENST00000483376 PUS7Q96PZ0 661 aaKnown RBP22.99■■□□□ 1.27
COL2A1-206ENST00000483376 SBNO1A3KN83 1393 aa22.99■■□□□ 1.27
COL2A1-206ENST00000483376 POLR3AO14802 1390 aaPredicted RBP22.99■■□□□ 1.27
COL2A1-206ENST00000483376 MED1Q15648 1581 aaPredicted RBP22.98■■□□□ 1.27
COL2A1-206ENST00000483376 SRPK2P78362 688 aaKnown RBP22.98■■□□□ 1.27
COL2A1-206ENST00000483376 TESK2Q96S53 571 aa22.98■■□□□ 1.27
COL2A1-206ENST00000483376 PSME1Q06323 249 aa22.97■■□□□ 1.27
COL2A1-206ENST00000483376 ST20-MTHFSA0A0A6YYL1 179 aa22.96■■□□□ 1.27
COL2A1-206ENST00000483376 ATAD2Q6PL18 1390 aa22.96■■□□□ 1.27
COL2A1-206ENST00000483376 COL22A1Q8NFW1 1626 aaPredicted RBP22.96■■□□□ 1.27
COL2A1-206ENST00000483376 SPATA31A3Q5VYP0 1347 aa22.95■■□□□ 1.26
COL2A1-206ENST00000483376 KRT28Q7Z3Y7 464 aa22.95■■□□□ 1.26
COL2A1-206ENST00000483376 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
COL2A1-206ENST00000483376 CABP2Q9NPB3 220 aa22.95■■□□□ 1.26
COL2A1-206ENST00000483376 TNS3Q68CZ2 1445 aa22.93■■□□□ 1.26
COL2A1-206ENST00000483376 PPIP5K1Q6PFW1 1433 aa22.93■■□□□ 1.26
COL2A1-206ENST00000483376 BRD4O60885 1362 aaPredicted RBP22.92■■□□□ 1.26
COL2A1-206ENST00000483376 NGDNQ8NEJ9 315 aaKnown RBP22.92■■□□□ 1.26
COL2A1-206ENST00000483376 TRPM3Q9HCF6 1732 aaPredicted RBP22.91■■□□□ 1.26
COL2A1-206ENST00000483376 ARHGEF10O15013 1369 aa22.9■■□□□ 1.26
COL2A1-206ENST00000483376 ACEP12821 1306 aa22.9■■□□□ 1.26
COL2A1-206ENST00000483376 XPCQ01831 940 aaPredicted RBP22.9■■□□□ 1.26
COL2A1-206ENST00000483376 LRP6O75581 1613 aa22.9■■□□□ 1.26
COL2A1-206ENST00000483376 CABP1Q9NZU7 370 aa22.87■■□□□ 1.25
COL2A1-206ENST00000483376 ALS2Q96Q42 1657 aa22.86■■□□□ 1.25
COL2A1-206ENST00000483376 NINLQ9Y2I6 1382 aa22.86■■□□□ 1.25
COL2A1-206ENST00000483376 TMF1P82094 1093 aa22.85■■□□□ 1.25
COL2A1-206ENST00000483376 CPSF1Q10570 1443 aaKnown RBP22.84■■□□□ 1.25
COL2A1-206ENST00000483376 EIF4G2P78344 907 aaKnown RBP eCLIP22.84■■□□□ 1.25
COL2A1-206ENST00000483376 USP6P35125 1406 aa22.83■■□□□ 1.25
COL2A1-206ENST00000483376 ZNF692Q9BU19 519 aaPredicted RBP22.83■■□□□ 1.25
COL2A1-206ENST00000483376 DISP3Q9P2K9 1392 aa22.83■■□□□ 1.25
COL2A1-206ENST00000483376 SSH2Q76I76 1423 aa22.82■■□□□ 1.24
COL2A1-206ENST00000483376 CDCA8Q53HL2 280 aa22.82■■□□□ 1.24
COL2A1-206ENST00000483376 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
COL2A1-206ENST00000483376 AKAP12Q02952 1782 aa22.78■■□□□ 1.24
COL2A1-206ENST00000483376 NUTM2BA6NNL0 878 aaPredicted RBP22.77■■□□□ 1.24
COL2A1-206ENST00000483376 NUTM2EB1AL46 878 aaPredicted RBP22.77■■□□□ 1.24
COL2A1-206ENST00000483376 NUTM2AQ8IVF1 878 aaPredicted RBP22.77■■□□□ 1.24
COL2A1-206ENST00000483376 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms