RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
TSPAN1-208ENST00000482928 NGLY1Q96IV0 654 aa17.38■□□□□ 0.37
TSPAN1-208ENST00000482928 BCANQ96GW7 911 aa17.37■□□□□ 0.37
TSPAN1-208ENST00000482928 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
TSPAN1-208ENST00000482928 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
TSPAN1-208ENST00000482928 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
TSPAN1-208ENST00000482928 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
TSPAN1-208ENST00000482928 TMEM2Q9UHN6 1383 aa17.34■□□□□ 0.37
TSPAN1-208ENST00000482928 POLR3GLQ9BT43 218 aa17.33■□□□□ 0.36
TSPAN1-208ENST00000482928 SLAIN2Q9P270 581 aa17.33■□□□□ 0.36
TSPAN1-208ENST00000482928 AHDC1Q5TGY3 1603 aaPredicted RBP17.32■□□□□ 0.36
TSPAN1-208ENST00000482928 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
TSPAN1-208ENST00000482928 MSH6P52701 1360 aa17.31■□□□□ 0.36
TSPAN1-208ENST00000482928 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
TSPAN1-208ENST00000482928 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
TSPAN1-208ENST00000482928 CCDC7Q96M83 1385 aa17.3■□□□□ 0.36
TSPAN1-208ENST00000482928 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
TSPAN1-208ENST00000482928 DIP2AQ14689 1571 aa17.29■□□□□ 0.36
TSPAN1-208ENST00000482928 TMF1P82094 1093 aa17.29■□□□□ 0.36
TSPAN1-208ENST00000482928 TXNDC2Q86VQ3 553 aa17.29■□□□□ 0.36
TSPAN1-208ENST00000482928 WASHC2AQ641Q2 1341 aa17.28■□□□□ 0.36
TSPAN1-208ENST00000482928 C1QTNF8P60827 252 aa17.28■□□□□ 0.36
TSPAN1-208ENST00000482928 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
TSPAN1-208ENST00000482928 BCL9LQ86UU0 1499 aa17.27■□□□□ 0.36
TSPAN1-208ENST00000482928 TRAK1Q9UPV9 953 aa17.27■□□□□ 0.36
TSPAN1-208ENST00000482928 SLIT1O75093 1534 aa17.26■□□□□ 0.35
TSPAN1-208ENST00000482928 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
TSPAN1-208ENST00000482928 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
TSPAN1-208ENST00000482928 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
TSPAN1-208ENST00000482928 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
TSPAN1-208ENST00000482928 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
TSPAN1-208ENST00000482928 DEFB132Q7Z7B7 95 aa17.25■□□□□ 0.35
TSPAN1-208ENST00000482928 PLEKHG1Q9ULL1 1385 aa17.25■□□□□ 0.35
TSPAN1-208ENST00000482928 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
TSPAN1-208ENST00000482928 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
TSPAN1-208ENST00000482928 STK26Q9P289 416 aa17.24■□□□□ 0.35
TSPAN1-208ENST00000482928 C11orf95C9JLR9 678 aaPredicted RBP17.22■□□□□ 0.35
TSPAN1-208ENST00000482928 YTHDC2Q9H6S0 1430 aaKnown RBP17.21■□□□□ 0.35
TSPAN1-208ENST00000482928 ZNF784Q8NCA9 323 aaPredicted RBP17.21■□□□□ 0.35
TSPAN1-208ENST00000482928 POGKQ9P215 609 aa17.21■□□□□ 0.35
TSPAN1-208ENST00000482928 NKTRP30414 1462 aaKnown RBP17.2■□□□□ 0.34
TSPAN1-208ENST00000482928 LTKP29376 864 aa17.2■□□□□ 0.34
TSPAN1-208ENST00000482928 TESK2Q96S53 571 aa17.2■□□□□ 0.34
TSPAN1-208ENST00000482928 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
TSPAN1-208ENST00000482928 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
TSPAN1-208ENST00000482928 NRXN3Q9Y4C0 1643 aa17.19■□□□□ 0.34
TSPAN1-208ENST00000482928 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
TSPAN1-208ENST00000482928 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
TSPAN1-208ENST00000482928 LRPPRCP42704 1394 aaKnown RBP17.18■□□□□ 0.34
TSPAN1-208ENST00000482928 ANP32CO43423 234 aa17.18■□□□□ 0.34
TSPAN1-208ENST00000482928 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
TSPAN1-208ENST00000482928 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
TSPAN1-208ENST00000482928 KCNA6P17658 529 aa17.16■□□□□ 0.34
TSPAN1-208ENST00000482928 SLC34A2O95436 690 aa17.15■□□□□ 0.34
TSPAN1-208ENST00000482928 DLC1Q96QB1 1528 aa17.15■□□□□ 0.34
TSPAN1-208ENST00000482928 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
TSPAN1-208ENST00000482928 MIER1Q8N108 512 aa17.14■□□□□ 0.33
TSPAN1-208ENST00000482928 PRAM1Q96QH2 718 aa17.14■□□□□ 0.33
TSPAN1-208ENST00000482928 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
TSPAN1-208ENST00000482928 TRPC5Q9UL62 973 aaPredicted RBP17.14■□□□□ 0.33
TSPAN1-208ENST00000482928 EVC2Q86UK5 1308 aa17.14■□□□□ 0.33
TSPAN1-208ENST00000482928 METP08581 1390 aa17.14■□□□□ 0.33
TSPAN1-208ENST00000482928 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
TSPAN1-208ENST00000482928 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
TSPAN1-208ENST00000482928 ABCC11Q96J66 1382 aa17.13■□□□□ 0.33
TSPAN1-208ENST00000482928 KNDC1Q76NI1 1749 aa17.12■□□□□ 0.33
TSPAN1-208ENST00000482928 USP21Q9UK80 565 aa17.11■□□□□ 0.33
TSPAN1-208ENST00000482928 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
TSPAN1-208ENST00000482928 CAMTA1Q9Y6Y1 1673 aa17.09■□□□□ 0.33
TSPAN1-208ENST00000482928 ATRNO75882 1429 aa17.08■□□□□ 0.32
TSPAN1-208ENST00000482928 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
TSPAN1-208ENST00000482928 TECPR2O15040 1411 aa17.07■□□□□ 0.32
TSPAN1-208ENST00000482928 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
TSPAN1-208ENST00000482928 SIRT1Q96EB6 747 aa17.07■□□□□ 0.32
TSPAN1-208ENST00000482928 BRWD3Q6RI45 1802 aa17.06■□□□□ 0.32
TSPAN1-208ENST00000482928 ADAMTS2O95450 1211 aa17.06■□□□□ 0.32
TSPAN1-208ENST00000482928 AMOTL2Q9Y2J4 779 aa17.06■□□□□ 0.32
TSPAN1-208ENST00000482928 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
TSPAN1-208ENST00000482928 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
TSPAN1-208ENST00000482928 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
TSPAN1-208ENST00000482928 PUS7Q96PZ0 661 aaKnown RBP17.05■□□□□ 0.32
TSPAN1-208ENST00000482928 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
TSPAN1-208ENST00000482928 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
TSPAN1-208ENST00000482928 TULP4Q9NRJ4 1543 aa17.04■□□□□ 0.32
TSPAN1-208ENST00000482928 PANK3Q9H999 370 aa17.03■□□□□ 0.32
TSPAN1-208ENST00000482928 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.32
TSPAN1-208ENST00000482928 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
TSPAN1-208ENST00000482928 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
TSPAN1-208ENST00000482928 PTCH1Q13635 1447 aa17.02■□□□□ 0.31
TSPAN1-208ENST00000482928 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.31
TSPAN1-208ENST00000482928 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
TSPAN1-208ENST00000482928 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
TSPAN1-208ENST00000482928 CHD4Q14839 1912 aa17.01■□□□□ 0.31
TSPAN1-208ENST00000482928 PNPLA6Q8IY17 1366 aa17.01■□□□□ 0.31
TSPAN1-208ENST00000482928 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
TSPAN1-208ENST00000482928 MYOM1P52179 1685 aa17.01■□□□□ 0.31
TSPAN1-208ENST00000482928 C14orf37Q86TY3 774 aa17■□□□□ 0.31
TSPAN1-208ENST00000482928 CDK19Q9BWU1 502 aa17■□□□□ 0.31
TSPAN1-208ENST00000482928 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
TSPAN1-208ENST00000482928 KTN1Q86UP2 1357 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms