RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
GTF3A-207ENST00000482655 MOXD2PA6NHM9 499 aa8.7□□□□□ -1.02
GTF3A-207ENST00000482655 NDUFV2P19404 249 aa8.69□□□□□ -1.02
GTF3A-207ENST00000482655 RETREG3Q86VR2 466 aa8.69□□□□□ -1.02
GTF3A-207ENST00000482655 SYMPKQ92797 1274 aaKnown RBP8.68□□□□□ -1.02
GTF3A-207ENST00000482655 MMP16P51512 607 aa8.67□□□□□ -1.02
GTF3A-207ENST00000482655 LAPTM4AQ15012 233 aa8.67□□□□□ -1.02
GTF3A-207ENST00000482655 PLA2G2CQ5R387 149 aa8.67□□□□□ -1.02
GTF3A-207ENST00000482655 PCDHGC3Q9UN70 934 aa8.67□□□□□ -1.02
GTF3A-207ENST00000482655 ZBTB24O43167 697 aaPredicted RBP8.66□□□□□ -1.02
GTF3A-207ENST00000482655 DXOO77932 396 aaKnown RBP8.66□□□□□ -1.02
GTF3A-207ENST00000482655 GJA5P36382 358 aa8.66□□□□□ -1.02
GTF3A-207ENST00000482655 SPRYD7Q5W111 196 aa8.66□□□□□ -1.02
GTF3A-207ENST00000482655 RSBN1LQ6PCB5 846 aaPredicted RBP8.66□□□□□ -1.02
GTF3A-207ENST00000482655 LIAT1Q6ZQX7 453 aa8.66□□□□□ -1.02
GTF3A-207ENST00000482655 SPDYE5A6NIY4 337 aa8.65□□□□□ -1.02
GTF3A-207ENST00000482655 GFRA3O60609 400 aa8.65□□□□□ -1.02
GTF3A-207ENST00000482655 JUNDP17535 347 aa8.65□□□□□ -1.02
GTF3A-207ENST00000482655 MTMR2Q13614 643 aa8.65□□□□□ -1.02
GTF3A-207ENST00000482655 ZNF697Q5TEC3 545 aa8.65□□□□□ -1.02
GTF3A-207ENST00000482655 ZNF598Q86UK7 904 aaKnown RBP8.65□□□□□ -1.02
GTF3A-207ENST00000482655 EMID1Q96A84 441 aaPredicted RBP8.65□□□□□ -1.02
GTF3A-207ENST00000482655 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
GTF3A-207ENST00000482655 CD2BP2O95400 341 aaKnown RBP8.64□□□□□ -1.03
GTF3A-207ENST00000482655 RPIAP49247 311 aa8.64□□□□□ -1.03
GTF3A-207ENST00000482655 RIC3Q7Z5B4 369 aa8.64□□□□□ -1.03
GTF3A-207ENST00000482655 CCDC24Q8N4L8 307 aa8.64□□□□□ -1.03
GTF3A-207ENST00000482655 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
GTF3A-207ENST00000482655 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
GTF3A-207ENST00000482655 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
GTF3A-207ENST00000482655 SPTLC1O15269 473 aa8.63□□□□□ -1.03
GTF3A-207ENST00000482655 NRG2O14511 850 aaPredicted RBP8.62□□□□□ -1.03
GTF3A-207ENST00000482655 CSPP1Q1MSJ5 1256 aa8.62□□□□□ -1.03
GTF3A-207ENST00000482655 MYSM1Q5VVJ2 828 aa8.62□□□□□ -1.03
GTF3A-207ENST00000482655 Q6ZNB5 142 aa8.62□□□□□ -1.03
GTF3A-207ENST00000482655 ZBTB3Q9H5J0 574 aa8.62□□□□□ -1.03
GTF3A-207ENST00000482655 TPRNQ4KMQ1 711 aa8.61□□□□□ -1.03
GTF3A-207ENST00000482655 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
GTF3A-207ENST00000482655 DDRGK1Q96HY6 314 aa8.61□□□□□ -1.03
GTF3A-207ENST00000482655 NUDT12Q9BQG2 462 aa8.61□□□□□ -1.03
GTF3A-207ENST00000482655 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
GTF3A-207ENST00000482655 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
GTF3A-207ENST00000482655 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
GTF3A-207ENST00000482655 NUTM2BA6NNL0 878 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-207ENST00000482655 NUTM2EB1AL46 878 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-207ENST00000482655 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
GTF3A-207ENST00000482655 CCNYL3P0C7X3 344 aa8.58□□□□□ -1.04
GTF3A-207ENST00000482655 HRCP23327 699 aa8.58□□□□□ -1.04
GTF3A-207ENST00000482655 TRIM32Q13049 653 aa8.58□□□□□ -1.04
GTF3A-207ENST00000482655 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
GTF3A-207ENST00000482655 NUTM2DQ5VT03 806 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-207ENST00000482655 NUTM2AQ8IVF1 878 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-207ENST00000482655 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
GTF3A-207ENST00000482655 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-207ENST00000482655 PRR20EP86478 221 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 PRR20CP86479 221 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 PRR20DP86480 221 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 PRR20BP86481 221 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 PRR20AP86496 221 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 FOXC1Q12948 553 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 PTPRNQ16849 979 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 DESI1Q6ICB0 168 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 CABLES1Q8TDN4 633 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
GTF3A-207ENST00000482655 TUSC1Q2TAM9 212 aa8.56□□□□□ -1.04
GTF3A-207ENST00000482655 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
GTF3A-207ENST00000482655 TSC1Q92574 1164 aa8.56□□□□□ -1.04
GTF3A-207ENST00000482655 CFAP99D6REC4 459 aa8.55□□□□□ -1.04
GTF3A-207ENST00000482655 GDF9O60383 454 aa8.54□□□□□ -1.04
GTF3A-207ENST00000482655 QPCTQ16769 361 aa8.54□□□□□ -1.04
GTF3A-207ENST00000482655 SH3D19Q5HYK7 790 aa8.54□□□□□ -1.04
GTF3A-207ENST00000482655 LILRB3O75022 631 aa8.53□□□□□ -1.04
GTF3A-207ENST00000482655 SKIV2LQ15477 1246 aaKnown RBP8.53□□□□□ -1.04
GTF3A-207ENST00000482655 PKDCCQ504Y2 493 aa8.53□□□□□ -1.04
GTF3A-207ENST00000482655 HELBQ8NG08 1087 aaPredicted RBP8.53□□□□□ -1.04
GTF3A-207ENST00000482655 LYPD8Q6UX82 237 aa8.52□□□□□ -1.05
GTF3A-207ENST00000482655 CYP4X1Q8N118 509 aa8.52□□□□□ -1.05
GTF3A-207ENST00000482655 EVA1BQ9NVM1 165 aa8.52□□□□□ -1.05
GTF3A-207ENST00000482655 PKD2L1Q9P0L9 805 aa8.52□□□□□ -1.05
GTF3A-207ENST00000482655 FAM187AA6NFU0 413 aa8.51□□□□□ -1.05
GTF3A-207ENST00000482655 WNT7AO00755 349 aa8.51□□□□□ -1.05
GTF3A-207ENST00000482655 CTHP32929 405 aa8.51□□□□□ -1.05
GTF3A-207ENST00000482655 WNT7BP56706 349 aa8.51□□□□□ -1.05
GTF3A-207ENST00000482655 KCNH2Q12809 1159 aa8.51□□□□□ -1.05
GTF3A-207ENST00000482655 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
GTF3A-207ENST00000482655 PTCRAQ6ISU1 281 aaPredicted RBP8.5□□□□□ -1.05
GTF3A-207ENST00000482655 UNC93B1Q9H1C4 597 aa8.5□□□□□ -1.05
GTF3A-207ENST00000482655 TTC24A2A3L6 582 aaPredicted RBP8.49□□□□□ -1.05
GTF3A-207ENST00000482655 BRPF1P55201 1214 aaPredicted RBP8.49□□□□□ -1.05
GTF3A-207ENST00000482655 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
GTF3A-207ENST00000482655 DGAT1O75907 488 aa8.48□□□□□ -1.05
GTF3A-207ENST00000482655 RTL5Q5HYW3 569 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-207ENST00000482655 RC3H1Q5TC82 1133 aaKnown RBP8.48□□□□□ -1.05
GTF3A-207ENST00000482655 MRGPRX2Q96LB1 330 aa8.47□□□□□ -1.05
GTF3A-207ENST00000482655 SKOR1P84550 965 aa8.46□□□□□ -1.06
GTF3A-207ENST00000482655 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
GTF3A-207ENST00000482655 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
GTF3A-207ENST00000482655 EHBP1Q8NDI1 1231 aa8.46□□□□□ -1.06
GTF3A-207ENST00000482655 IL27Q8NEV9 243 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms