RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 MBD5Q9P267 1494 aa11.07□□□□□ -0.64
CHD6-209ENST00000482596 KRT27Q7Z3Y8 459 aa11.07□□□□□ -0.64
CHD6-209ENST00000482596 SPDYE1Q8NFV5 336 aaPredicted RBP11.06□□□□□ -0.64
CHD6-209ENST00000482596 SPON1Q9HCB6 807 aa11.06□□□□□ -0.64
CHD6-209ENST00000482596 CFDP1Q9UEE9 299 aaPredicted RBP11.06□□□□□ -0.64
CHD6-209ENST00000482596 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
CHD6-209ENST00000482596 COL22A1Q8NFW1 1626 aaPredicted RBP11.05□□□□□ -0.64
CHD6-209ENST00000482596 KCNQ2O43526 872 aa11.04□□□□□ -0.64
CHD6-209ENST00000482596 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
CHD6-209ENST00000482596 MYOM2P54296 1465 aa11.03□□□□□ -0.64
CHD6-209ENST00000482596 DISP2A7MBM2 1401 aa11.02□□□□□ -0.64
CHD6-209ENST00000482596 SHANK3Q9BYB0 1731 aa11.02□□□□□ -0.65
CHD6-209ENST00000482596 FAM182BQ5T319 152 aa11.02□□□□□ -0.65
CHD6-209ENST00000482596 NRKQ7Z2Y5 1582 aa11.02□□□□□ -0.65
CHD6-209ENST00000482596 DCCP43146 1447 aa11.01□□□□□ -0.65
CHD6-209ENST00000482596 NUP188Q5SRE5 1749 aa11.01□□□□□ -0.65
CHD6-209ENST00000482596 UNC5CLQ8IV45 518 aa11.01□□□□□ -0.65
CHD6-209ENST00000482596 CAMKK2Q96RR4 588 aa11.01□□□□□ -0.65
CHD6-209ENST00000482596 LAMC1P11047 1609 aa11.01□□□□□ -0.65
CHD6-209ENST00000482596 MYOM1P52179 1685 aa11.01□□□□□ -0.65
CHD6-209ENST00000482596 PPP1R15AO75807 674 aaPredicted RBP11□□□□□ -0.65
CHD6-209ENST00000482596 HSPA6P17066 643 aa11□□□□□ -0.65
CHD6-209ENST00000482596 IDI1Q13907 227 aa11□□□□□ -0.65
CHD6-209ENST00000482596 RREB1Q92766 1687 aa11□□□□□ -0.65
CHD6-209ENST00000482596 SLIT2O94813 1529 aa10.99□□□□□ -0.65
CHD6-209ENST00000482596 TNS4Q8IZW8 715 aa10.98□□□□□ -0.65
CHD6-209ENST00000482596 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
CHD6-209ENST00000482596 PLEKHG1Q9ULL1 1385 aa10.98□□□□□ -0.65
CHD6-209ENST00000482596 MYO5BQ9ULV0 1848 aa10.98□□□□□ -0.65
CHD6-209ENST00000482596 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
CHD6-209ENST00000482596 ADGRB3O60242 1522 aa10.97□□□□□ -0.65
CHD6-209ENST00000482596 TRPM2O94759 1503 aa10.96□□□□□ -0.65
CHD6-209ENST00000482596 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.65
CHD6-209ENST00000482596 CCNB3Q8WWL7 1395 aa10.96□□□□□ -0.65
CHD6-209ENST00000482596 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
CHD6-209ENST00000482596 TBX22Q9Y458 520 aa10.96□□□□□ -0.65
CHD6-209ENST00000482596 ZFYVE9O95405 1425 aa10.95□□□□□ -0.66
CHD6-209ENST00000482596 ARHGAP31Q2M1Z3 1444 aa10.95□□□□□ -0.66
CHD6-209ENST00000482596 PTPRUQ92729 1446 aa10.95□□□□□ -0.66
CHD6-209ENST00000482596 ADAMTS13Q76LX8 1427 aa10.94□□□□□ -0.66
CHD6-209ENST00000482596 A0A0G2JS52 829 aa10.94□□□□□ -0.66
CHD6-209ENST00000482596 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.667e-7■■■□□ 17.4
CHD6-209ENST00000482596 MYT1Q01538 1121 aa10.94□□□□□ -0.66
CHD6-209ENST00000482596 CCDC141Q6ZP82 1450 aa10.93□□□□□ -0.66
CHD6-209ENST00000482596 GOLGB1Q14789 3259 aaKnown RBP10.93□□□□□ -0.66
CHD6-209ENST00000482596 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
CHD6-209ENST00000482596 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
CHD6-209ENST00000482596 NALCNQ8IZF0 1738 aa10.92□□□□□ -0.66
CHD6-209ENST00000482596 EIF2AK4Q9P2K8 1649 aaKnown RBP10.92□□□□□ -0.66
CHD6-209ENST00000482596 ADGRB2O60241 1585 aa10.92□□□□□ -0.66
CHD6-209ENST00000482596 VPS72Q15906 364 aa10.92□□□□□ -0.66
CHD6-209ENST00000482596 ORAI2Q96SN7 254 aa10.92□□□□□ -0.66
CHD6-209ENST00000482596 SYT17Q9BSW7 474 aa10.92□□□□□ -0.66
CHD6-209ENST00000482596 CCDC9Q9Y3X0 531 aaKnown RBP10.92□□□□□ -0.66
CHD6-209ENST00000482596 CASZ1Q86V15 1759 aa10.92□□□□□ -0.66
CHD6-209ENST00000482596 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
CHD6-209ENST00000482596 EHBP1L1Q8N3D4 1523 aa10.91□□□□□ -0.66
CHD6-209ENST00000482596 FHDC1Q9C0D6 1143 aaPredicted RBP10.91□□□□□ -0.66
CHD6-209ENST00000482596 PLCH1Q4KWH8 1693 aa10.9□□□□□ -0.66
CHD6-209ENST00000482596 FAM83GA6ND36 823 aa10.9□□□□□ -0.66
CHD6-209ENST00000482596 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
CHD6-209ENST00000482596 NBPF8Q3BBV2 869 aa10.9□□□□□ -0.66
CHD6-209ENST00000482596 NBPF14Q5TI25 921 aa10.9□□□□□ -0.66
CHD6-209ENST00000482596 PDGFDQ9GZP0 370 aaPredicted RBP10.9□□□□□ -0.66
CHD6-209ENST00000482596 RIMS2Q9UQ26 1411 aa10.9□□□□□ -0.66
CHD6-209ENST00000482596 TMEM131LA2VDJ0 1609 aa10.89□□□□□ -0.67
CHD6-209ENST00000482596 TRIM37O94972 964 aa10.89□□□□□ -0.67
CHD6-209ENST00000482596 APBA3O96018 575 aa10.89□□□□□ -0.67
CHD6-209ENST00000482596 PTGER2P43116 358 aa10.89□□□□□ -0.67
CHD6-209ENST00000482596 FAM98CQ17RN3 349 aaKnown RBP10.89□□□□□ -0.67
CHD6-209ENST00000482596 DNAJC5GQ8N7S2 189 aa10.89□□□□□ -0.67
CHD6-209ENST00000482596 NOS1P29475 1434 aa10.89□□□□□ -0.67
CHD6-209ENST00000482596 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
CHD6-209ENST00000482596 MTUS2Q5JR59 1369 aa10.89□□□□□ -0.67
CHD6-209ENST00000482596 PARD3Q8TEW0 1356 aa10.88□□□□□ -0.67
CHD6-209ENST00000482596 PIK3R4Q99570 1358 aa10.88□□□□□ -0.67
CHD6-209ENST00000482596 PCNTO95613 3336 aa10.87□□□□□ -0.67
CHD6-209ENST00000482596 DLC1Q96QB1 1528 aa10.87□□□□□ -0.67
CHD6-209ENST00000482596 USP32Q8NFA0 1604 aa10.87□□□□□ -0.67
CHD6-209ENST00000482596 GCC2Q8IWJ2 1684 aa10.86□□□□□ -0.67
CHD6-209ENST00000482596 CASKIN1Q8WXD9 1431 aa10.86□□□□□ -0.67
CHD6-209ENST00000482596 ZBTB7AO95365 584 aa10.86□□□□□ -0.67
CHD6-209ENST00000482596 FKBP8Q14318 412 aa10.86□□□□□ -0.67
CHD6-209ENST00000482596 NWD2Q9ULI1 1742 aa10.86□□□□□ -0.67
CHD6-209ENST00000482596 PTPN23Q9H3S7 1636 aa10.85□□□□□ -0.67
CHD6-209ENST00000482596 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
CHD6-209ENST00000482596 XPCQ01831 940 aaPredicted RBP10.84□□□□□ -0.67
CHD6-209ENST00000482596 PXDNQ92626 1479 aa10.84□□□□□ -0.67
CHD6-209ENST00000482596 RPRD2Q5VT52 1461 aaKnown RBP10.83□□□□□ -0.68
CHD6-209ENST00000482596 GPR162Q16538 588 aa10.83□□□□□ -0.68
CHD6-209ENST00000482596 PROM2Q8N271 834 aa10.83□□□□□ -0.68
CHD6-209ENST00000482596 ATP10DQ9P241 1426 aa10.83□□□□□ -0.68
CHD6-209ENST00000482596 WWC3Q9ULE0 1092 aa10.82□□□□□ -0.68
CHD6-209ENST00000482596 NRAPQ86VF7 1730 aa10.81□□□□□ -0.68
CHD6-209ENST00000482596 ANO8Q9HCE9 1232 aaPredicted RBP10.81□□□□□ -0.68
CHD6-209ENST00000482596 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
CHD6-209ENST00000482596 ARHGEF5Q12774 1597 aa10.79□□□□□ -0.68
CHD6-209ENST00000482596 TNS2Q63HR2 1409 aa10.78□□□□□ -0.68
CHD6-209ENST00000482596 APLP1P51693 650 aa10.78□□□□□ -0.68
CHD6-209ENST00000482596 GPBP1L1Q9HC44 474 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms