RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 DSG3P32926 999 aa11.47□□□□□ -0.57
CCNC-204ENST00000482541 SPATA31E1Q6ZUB1 1445 aa11.47□□□□□ -0.57
CCNC-204ENST00000482541 JCADQ9P266 1359 aa11.47□□□□□ -0.57
CCNC-204ENST00000482541 HRCP23327 699 aa11.46□□□□□ -0.57
CCNC-204ENST00000482541 BRINP3Q76B58 766 aa11.46□□□□□ -0.57
CCNC-204ENST00000482541 RAB3GAP2Q9H2M9 1393 aa11.46□□□□□ -0.57
CCNC-204ENST00000482541 SETD1AO15047 1707 aaKnown RBP11.46□□□□□ -0.58
CCNC-204ENST00000482541 PTCH1Q13635 1447 aa11.45□□□□□ -0.58
CCNC-204ENST00000482541 PRAG1Q86YV5 1406 aa11.45□□□□□ -0.58
CCNC-204ENST00000482541 ADGRL3Q9HAR2 1447 aa11.45□□□□□ -0.58
CCNC-204ENST00000482541 ADGRF5Q8IZF2 1346 aa11.45□□□□□ -0.58
CCNC-204ENST00000482541 RGS17Q9UGC6 210 aaPredicted RBP11.45□□□□□ -0.58
CCNC-204ENST00000482541 COL16A1Q07092 1604 aaPredicted RBP11.44□□□□□ -0.58
CCNC-204ENST00000482541 AHDC1Q5TGY3 1603 aaPredicted RBP11.44□□□□□ -0.58
CCNC-204ENST00000482541 MST1RQ04912 1400 aa11.44□□□□□ -0.58
CCNC-204ENST00000482541 SPATA31A6Q5VVP1 1343 aa11.44□□□□□ -0.58
CCNC-204ENST00000482541 ROBO2Q9HCK4 1378 aa11.43□□□□□ -0.58
CCNC-204ENST00000482541 IFT172Q9UG01 1749 aa11.42□□□□□ -0.58
CCNC-204ENST00000482541 ASXL1Q8IXJ9 1541 aa11.41□□□□□ -0.58
CCNC-204ENST00000482541 NALCNQ8IZF0 1738 aa11.41□□□□□ -0.58
CCNC-204ENST00000482541 LRRC59Q96AG4 307 aaKnown RBP11.41□□□□□ -0.58
CCNC-204ENST00000482541 PIK3C2GO75747 1445 aa11.4□□□□□ -0.58
CCNC-204ENST00000482541 C1orf167Q5SNV9 1468 aa11.4□□□□□ -0.58
CCNC-204ENST00000482541 ABCC11Q96J66 1382 aa11.4□□□□□ -0.58
CCNC-204ENST00000482541 C14orf93Q9H972 538 aaKnown RBP11.4□□□□□ -0.58
CCNC-204ENST00000482541 TECPR2O15040 1411 aa11.39□□□□□ -0.59
CCNC-204ENST00000482541 LRPPRCP42704 1394 aaKnown RBP11.39□□□□□ -0.59
CCNC-204ENST00000482541 POTEHQ6S545 545 aa11.39□□□□□ -0.59
CCNC-204ENST00000482541 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
CCNC-204ENST00000482541 STAC3Q96MF2 364 aa11.39□□□□□ -0.59
CCNC-204ENST00000482541 SHPRHQ149N8 1683 aa11.39□□□□□ -0.59
CCNC-204ENST00000482541 NHSL1Q5SYE7 1610 aa11.38□□□□□ -0.59
CCNC-204ENST00000482541 TMEM132EQ6IEE7 984 aa11.38□□□□□ -0.59
CCNC-204ENST00000482541 STK26Q9P289 416 aa11.38□□□□□ -0.59
CCNC-204ENST00000482541 POTEAQ6S8J7 498 aa11.38□□□□□ -0.59
CCNC-204ENST00000482541 MYOM2P54296 1465 aa11.37□□□□□ -0.59
CCNC-204ENST00000482541 WAPLQ7Z5K2 1190 aa11.37□□□□□ -0.59
CCNC-204ENST00000482541 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
CCNC-204ENST00000482541 NRXN1Q9ULB1 1477 aa11.37□□□□□ -0.59
CCNC-204ENST00000482541 DHX57Q6P158 1386 aaKnown RBP11.36□□□□□ -0.59
CCNC-204ENST00000482541 MEX3CQ5U5Q3 659 aaKnown RBP11.36□□□□□ -0.59
CCNC-204ENST00000482541 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
CCNC-204ENST00000482541 YTHDC2Q9H6S0 1430 aaKnown RBP11.36□□□□□ -0.59
CCNC-204ENST00000482541 CFAP70Q5T0N1 1121 aa11.35□□□□□ -0.59
CCNC-204ENST00000482541 ZNF772Q68DY9 489 aaPredicted RBP11.35□□□□□ -0.59
CCNC-204ENST00000482541 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
CCNC-204ENST00000482541 LRP6O75581 1613 aa11.35□□□□□ -0.59
CCNC-204ENST00000482541 LAMC1P11047 1609 aa11.35□□□□□ -0.59
CCNC-204ENST00000482541 KNDC1Q76NI1 1749 aa11.35□□□□□ -0.59
CCNC-204ENST00000482541 CDC42BPGQ6DT37 1551 aa11.34□□□□□ -0.59
CCNC-204ENST00000482541 NUTM2BA6NNL0 878 aaPredicted RBP11.34□□□□□ -0.59
CCNC-204ENST00000482541 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
CCNC-204ENST00000482541 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
CCNC-204ENST00000482541 ESCO1Q5FWF5 840 aa11.34□□□□□ -0.59
CCNC-204ENST00000482541 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
CCNC-204ENST00000482541 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
CCNC-204ENST00000482541 NPHP3Q7Z494 1330 aa11.33□□□□□ -0.6
CCNC-204ENST00000482541 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
CCNC-204ENST00000482541 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
CCNC-204ENST00000482541 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
CCNC-204ENST00000482541 FOXO3O43524 673 aa11.31□□□□□ -0.6
CCNC-204ENST00000482541 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
CCNC-204ENST00000482541 PRAM1Q96QH2 718 aa11.29□□□□□ -0.6
CCNC-204ENST00000482541 POGKQ9P215 609 aa11.29□□□□□ -0.6
CCNC-204ENST00000482541 DLC1Q96QB1 1528 aa11.29□□□□□ -0.6
CCNC-204ENST00000482541 AFF2P51816 1311 aa11.28□□□□□ -0.6
CCNC-204ENST00000482541 RXRBP28702 533 aa11.28□□□□□ -0.6
CCNC-204ENST00000482541 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
CCNC-204ENST00000482541 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
CCNC-204ENST00000482541 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
CCNC-204ENST00000482541 NGLY1Q96IV0 654 aa11.27□□□□□ -0.61
CCNC-204ENST00000482541 C8orf37Q96NL8 207 aa11.27□□□□□ -0.61
CCNC-204ENST00000482541 TRAK1Q9UPV9 953 aa11.27□□□□□ -0.61
CCNC-204ENST00000482541 SAFB2Q14151 953 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCNC-204ENST00000482541 PXDNQ92626 1479 aa11.26□□□□□ -0.61
CCNC-204ENST00000482541 ADAMTS2O95450 1211 aa11.26□□□□□ -0.61
CCNC-204ENST00000482541 PHF8Q9UPP1 1060 aa11.26□□□□□ -0.61
CCNC-204ENST00000482541 COL22A1Q8NFW1 1626 aaPredicted RBP11.26□□□□□ -0.61
CCNC-204ENST00000482541 KIF1AQ12756 1690 aa11.25□□□□□ -0.61
CCNC-204ENST00000482541 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
CCNC-204ENST00000482541 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
CCNC-204ENST00000482541 XPCQ01831 940 aaPredicted RBP11.25□□□□□ -0.61
CCNC-204ENST00000482541 PSME1Q06323 249 aa11.25□□□□□ -0.61
CCNC-204ENST00000482541 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
CCNC-204ENST00000482541 KRT28Q7Z3Y7 464 aa11.25□□□□□ -0.61
CCNC-204ENST00000482541 QTRT2Q9H974 415 aaKnown RBP11.25□□□□□ -0.61
CCNC-204ENST00000482541 FNBP4Q8N3X1 1017 aaPredicted RBP11.24□□□□□ -0.61
CCNC-204ENST00000482541 RGPD8O14715 1765 aaPredicted RBP11.24□□□□□ -0.61
CCNC-204ENST00000482541 CDK12Q9NYV4 1490 aaPredicted RBP11.24□□□□□ -0.61
CCNC-204ENST00000482541 SPATA31A3Q5VYP0 1347 aa11.24□□□□□ -0.61
CCNC-204ENST00000482541 ANKARQ7Z5J8 1434 aa11.24□□□□□ -0.61
CCNC-204ENST00000482541 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
CCNC-204ENST00000482541 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
CCNC-204ENST00000482541 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
CCNC-204ENST00000482541 USP21Q9UK80 565 aa11.23□□□□□ -0.61
CCNC-204ENST00000482541 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
CCNC-204ENST00000482541 ADGRB2O60241 1585 aa11.22□□□□□ -0.61
CCNC-204ENST00000482541 WASLO00401 505 aaPredicted RBP11.22□□□□□ -0.61
CCNC-204ENST00000482541 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
CCNC-204ENST00000482541 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms