RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 SRPK2P78362 688 aaKnown RBP19.33■□□□□ 0.69
CHD3-211ENST00000481999 POGKQ9P215 609 aa19.33■□□□□ 0.69
CHD3-211ENST00000481999 FER1L4A9Z1Z3 1794 aa19.33■□□□□ 0.68
CHD3-211ENST00000481999 EVC2Q86UK5 1308 aa19.32■□□□□ 0.68
CHD3-211ENST00000481999 PPP4R2Q9NY27 417 aa19.32■□□□□ 0.68
CHD3-211ENST00000481999 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
CHD3-211ENST00000481999 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
CHD3-211ENST00000481999 TNRQ92752 1358 aa19.31■□□□□ 0.68
CHD3-211ENST00000481999 RIMS1Q86UR5 1692 aaKnown RBP19.3■□□□□ 0.68
CHD3-211ENST00000481999 SLC24A1O60721 1099 aa19.3■□□□□ 0.68
CHD3-211ENST00000481999 NUDCQ9Y266 331 aa19.29■□□□□ 0.68
CHD3-211ENST00000481999 METP08581 1390 aa19.29■□□□□ 0.68
CHD3-211ENST00000481999 CCDC146Q8IYE0 955 aa19.28■□□□□ 0.68
CHD3-211ENST00000481999 SMG6Q86US8 1419 aaKnown RBP19.28■□□□□ 0.68
CHD3-211ENST00000481999 ANP32EQ9BTT0 268 aa19.27■□□□□ 0.68
CHD3-211ENST00000481999 TXNDC2Q86VQ3 553 aa19.26■□□□□ 0.67
CHD3-211ENST00000481999 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
CHD3-211ENST00000481999 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
CHD3-211ENST00000481999 WDR43Q15061 677 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHD3-211ENST00000481999 A0A1W2PP64 1363 aa19.24■□□□□ 0.67
CHD3-211ENST00000481999 LTKP29376 864 aa19.24■□□□□ 0.67
CHD3-211ENST00000481999 SETD1AO15047 1707 aaKnown RBP19.24■□□□□ 0.67
CHD3-211ENST00000481999 BLMP54132 1417 aaPredicted RBP19.24■□□□□ 0.67
CHD3-211ENST00000481999 MORC1Q86VD1 984 aa19.24■□□□□ 0.67
CHD3-211ENST00000481999 CDK19Q9BWU1 502 aa19.24■□□□□ 0.67
CHD3-211ENST00000481999 NCKAP5LQ9HCH0 1330 aa19.22■□□□□ 0.67
CHD3-211ENST00000481999 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
CHD3-211ENST00000481999 C3P01024 1663 aa19.21■□□□□ 0.67
CHD3-211ENST00000481999 UBR1Q8IWV7 1749 aa19.21■□□□□ 0.67
CHD3-211ENST00000481999 GGNBP2Q9H3C7 697 aa19.21■□□□□ 0.67
CHD3-211ENST00000481999 CABP1Q9NZU7 370 aa19.21■□□□□ 0.67
CHD3-211ENST00000481999 TMEM2Q9UHN6 1383 aa19.21■□□□□ 0.67
CHD3-211ENST00000481999 SLC26A8Q96RN1 970 aa19.2■□□□□ 0.66
CHD3-211ENST00000481999 CGNL1Q0VF96 1302 aa19.19■□□□□ 0.66
CHD3-211ENST00000481999 CD163L1Q9NR16 1453 aa19.17■□□□□ 0.66
CHD3-211ENST00000481999 FBLN1P23142 703 aa19.17■□□□□ 0.66
CHD3-211ENST00000481999 MTHFSP49914 203 aa19.17■□□□□ 0.66
CHD3-211ENST00000481999 B4GALNT3Q6L9W6 998 aa19.16■□□□□ 0.66
CHD3-211ENST00000481999 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.16■□□□□ 0.66
CHD3-211ENST00000481999 NUTM2FA1L443 756 aa19.15■□□□□ 0.66
CHD3-211ENST00000481999 APAF1O14727 1248 aa19.15■□□□□ 0.66
CHD3-211ENST00000481999 RNF123Q5XPI4 1314 aa19.14■□□□□ 0.66
CHD3-211ENST00000481999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
CHD3-211ENST00000481999 ABCC11Q96J66 1382 aa19.14■□□□□ 0.65
CHD3-211ENST00000481999 FANCIQ9NVI1 1328 aa19.13■□□□□ 0.65
CHD3-211ENST00000481999 ADAMTS13Q76LX8 1427 aa19.13■□□□□ 0.65
CHD3-211ENST00000481999 ATAD2Q6PL18 1390 aa19.13■□□□□ 0.65
CHD3-211ENST00000481999 FYB1O15117 783 aa19.12■□□□□ 0.65
CHD3-211ENST00000481999 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
CHD3-211ENST00000481999 ROBO2Q9HCK4 1378 aa19.12■□□□□ 0.65
CHD3-211ENST00000481999 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
CHD3-211ENST00000481999 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
CHD3-211ENST00000481999 NEUROD2Q15784 382 aa19.1■□□□□ 0.65
CHD3-211ENST00000481999 PLIN1O60240 522 aa19.1■□□□□ 0.65
CHD3-211ENST00000481999 RCAN3Q9UKA8 241 aa19.1■□□□□ 0.65
CHD3-211ENST00000481999 RRP7AQ9Y3A4 280 aaKnown RBP19.1■□□□□ 0.65
CHD3-211ENST00000481999 TERF2IPQ9NYB0 399 aa19.09■□□□□ 0.65
CHD3-211ENST00000481999 WASLO00401 505 aaPredicted RBP19.09■□□□□ 0.65
CHD3-211ENST00000481999 DLC1Q96QB1 1528 aa19.09■□□□□ 0.65
CHD3-211ENST00000481999 POLR3AO14802 1390 aaPredicted RBP19.08■□□□□ 0.65
CHD3-211ENST00000481999 USP32Q8NFA0 1604 aa19.08■□□□□ 0.65
CHD3-211ENST00000481999 SHPRHQ149N8 1683 aa19.08■□□□□ 0.65
CHD3-211ENST00000481999 HDGFP51858 240 aaKnown RBP19.08■□□□□ 0.65
CHD3-211ENST00000481999 ZRANB1Q9UGI0 708 aa19.07■□□□□ 0.64
CHD3-211ENST00000481999 NLRP1Q9C000 1473 aa19.07■□□□□ 0.64
CHD3-211ENST00000481999 ZNF521Q96K83 1311 aa19.06■□□□□ 0.64
CHD3-211ENST00000481999 INSRP06213 1382 aa19.06■□□□□ 0.64
CHD3-211ENST00000481999 PTPRUQ92729 1446 aa19.06■□□□□ 0.64
CHD3-211ENST00000481999 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
CHD3-211ENST00000481999 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
CHD3-211ENST00000481999 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
CHD3-211ENST00000481999 PRR36Q9H6K5 1346 aa19.05■□□□□ 0.64
CHD3-211ENST00000481999 PPIP5K1Q6PFW1 1433 aa19.04■□□□□ 0.64
CHD3-211ENST00000481999 NINLQ9Y2I6 1382 aa19.04■□□□□ 0.64
CHD3-211ENST00000481999 RRP1P56182 461 aaKnown RBP19.04■□□□□ 0.64
CHD3-211ENST00000481999 NUDT16Q96DE0 195 aaKnown RBP19.04■□□□□ 0.64
CHD3-211ENST00000481999 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
CHD3-211ENST00000481999 DUSP27Q5VZP5 1158 aa19.04■□□□□ 0.64
CHD3-211ENST00000481999 EID1Q9Y6B2 187 aa19.04■□□□□ 0.64
CHD3-211ENST00000481999 SETD1BQ9UPS6 1966 aaKnown RBP19.03■□□□□ 0.64
CHD3-211ENST00000481999 PPM1GO15355 546 aaPredicted RBP19.03■□□□□ 0.64
CHD3-211ENST00000481999 NME9Q86XW9 330 aa19.02■□□□□ 0.64
CHD3-211ENST00000481999 GOLGA2Q08379 1002 aa19.02■□□□□ 0.63
CHD3-211ENST00000481999 TECPR2O15040 1411 aa19.01■□□□□ 0.63
CHD3-211ENST00000481999 U2AF1L5P0DN76 240 aaPredicted RBP19.01■□□□□ 0.63
CHD3-211ENST00000481999 U2AF1Q01081 240 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHD3-211ENST00000481999 AMOTL2Q9Y2J4 779 aa19.01■□□□□ 0.63
CHD3-211ENST00000481999 MSH5O43196 834 aa19.01■□□□□ 0.63
CHD3-211ENST00000481999 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
CHD3-211ENST00000481999 NSD2O96028 1365 aa19.01■□□□□ 0.63
CHD3-211ENST00000481999 SIPA1L2Q9P2F8 1722 aaPredicted RBP19■□□□□ 0.63
CHD3-211ENST00000481999 CPS1P31327 1500 aa19■□□□□ 0.63
CHD3-211ENST00000481999 U2SURPO15042 1029 aaKnown RBP19■□□□□ 0.63
CHD3-211ENST00000481999 EXOC6Q8TAG9 804 aa19■□□□□ 0.63
CHD3-211ENST00000481999 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
CHD3-211ENST00000481999 FAM135BQ49AJ0 1406 aa18.99■□□□□ 0.63
CHD3-211ENST00000481999 THEMISQ8N1K5 641 aaPredicted RBP18.99■□□□□ 0.63
CHD3-211ENST00000481999 TCP11L2Q8N4U5 519 aa18.99■□□□□ 0.63
CHD3-211ENST00000481999 KNDC1Q76NI1 1749 aa18.98■□□□□ 0.63
CHD3-211ENST00000481999 CFAP53Q96M91 514 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms