RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 SALL2Q9Y467 1007 aaPredicted RBP7.28□□□□□ -1.24
KDM1A-204ENST00000481879 CD2BP2O95400 341 aaKnown RBP7.27□□□□□ -1.25
KDM1A-204ENST00000481879 FOXC1Q12948 553 aa7.27□□□□□ -1.25
KDM1A-204ENST00000481879 GRIPAP1Q4V328 841 aa7.27□□□□□ -1.25
KDM1A-204ENST00000481879 LMOD2Q6P5Q4 547 aa7.27□□□□□ -1.25
KDM1A-204ENST00000481879 PKD2L1Q9P0L9 805 aa7.27□□□□□ -1.25
KDM1A-204ENST00000481879 CTC1Q2NKJ3 1217 aa7.26□□□□□ -1.25
KDM1A-204ENST00000481879 BRICD5Q6PL45 260 aa7.26□□□□□ -1.25
KDM1A-204ENST00000481879 KDM2AQ9Y2K7 1162 aa7.26□□□□□ -1.25
KDM1A-204ENST00000481879 FCF1Q9Y324 198 aaKnown RBP7.26□□□□□ -1.25
KDM1A-204ENST00000481879 SMCPP49901 116 aaPredicted RBP7.25□□□□□ -1.25
KDM1A-204ENST00000481879 ZSCAN1Q8NBB4 408 aa7.25□□□□□ -1.25
KDM1A-204ENST00000481879 SNRPBP14678 240 aaKnown RBP7.24□□□□□ -1.25
KDM1A-204ENST00000481879 PRDM9Q9NQV7 894 aa7.23□□□□□ -1.25
KDM1A-204ENST00000481879 TULP1O00294 542 aaPredicted RBP7.22□□□□□ -1.25
KDM1A-204ENST00000481879 ZBTB24O43167 697 aaPredicted RBP7.22□□□□□ -1.25
KDM1A-204ENST00000481879 MAP2K5Q13163 448 aa7.22□□□□□ -1.25
KDM1A-204ENST00000481879 Q3C1V9 767 aa7.22□□□□□ -1.25
KDM1A-204ENST00000481879 MSS51Q4VC12 460 aa7.22□□□□□ -1.25
KDM1A-204ENST00000481879 RNF19BQ6ZMZ0 732 aa7.22□□□□□ -1.25
KDM1A-204ENST00000481879 TOR4AQ9NXH8 423 aa7.22□□□□□ -1.25
KDM1A-204ENST00000481879 CD46P15529 392 aa7.21□□□□□ -1.26
KDM1A-204ENST00000481879 CYP4X1Q8N118 509 aa7.21□□□□□ -1.26
KDM1A-204ENST00000481879 IRF6O14896 467 aa7.2□□□□□ -1.26
KDM1A-204ENST00000481879 KDM4AO75164 1064 aa7.19□□□□□ -1.26
KDM1A-204ENST00000481879 MINK1Q8N4C8 1332 aaPredicted RBP7.19□□□□□ -1.26
KDM1A-204ENST00000481879 GMPRP36959 345 aa7.18□□□□□ -1.26
KDM1A-204ENST00000481879 MMP16P51512 607 aa7.18□□□□□ -1.26
KDM1A-204ENST00000481879 TRIM47Q96LD4 638 aa7.18□□□□□ -1.26
KDM1A-204ENST00000481879 ATP13A2Q9NQ11 1180 aa7.18□□□□□ -1.26
KDM1A-204ENST00000481879 USP46P62068 366 aa7.17□□□□□ -1.26
KDM1A-204ENST00000481879 MDM2Q00987 491 aaPredicted RBP7.17□□□□□ -1.26
KDM1A-204ENST00000481879 VSIG10Q8N0Z9 540 aa7.17□□□□□ -1.26
KDM1A-204ENST00000481879 USB1Q9BQ65 265 aaKnown RBP7.17□□□□□ -1.26
KDM1A-204ENST00000481879 TTC24A2A3L6 582 aaPredicted RBP7.16□□□□□ -1.26
KDM1A-204ENST00000481879 KCTD17Q8N5Z5 321 aa7.16□□□□□ -1.26
KDM1A-204ENST00000481879 SLC16A10Q8TF71 515 aa7.16□□□□□ -1.26
KDM1A-204ENST00000481879 WNT7AO00755 349 aa7.15□□□□□ -1.26
KDM1A-204ENST00000481879 SENP2Q9HC62 589 aa7.15□□□□□ -1.26
KDM1A-204ENST00000481879 DXOO77932 396 aaKnown RBP7.14□□□□□ -1.27
KDM1A-204ENST00000481879 TRIM32Q13049 653 aa7.14□□□□□ -1.27
KDM1A-204ENST00000481879 SNIP1Q8TAD8 396 aaKnown RBP7.14□□□□□ -1.27
KDM1A-204ENST00000481879 HLA-CQ95604 372 aa7.13□□□□□ -1.27
KDM1A-204ENST00000481879 CCDC102AQ96A19 550 aa7.13□□□□□ -1.27
KDM1A-204ENST00000481879 HOXA2O43364 376 aa7.12□□□□□ -1.27
KDM1A-204ENST00000481879 CLCN1P35523 988 aa7.12□□□□□ -1.27
KDM1A-204ENST00000481879 CCDC24Q8N4L8 307 aa7.12□□□□□ -1.27
KDM1A-204ENST00000481879 KRI1Q8N9T8 703 aaKnown RBP7.12□□□□□ -1.27
KDM1A-204ENST00000481879 GPCPD1Q9NPB8 672 aa7.12□□□□□ -1.27
KDM1A-204ENST00000481879 SMPD1P17405 629 aa7.11□□□□□ -1.27
KDM1A-204ENST00000481879 MRGPRX2Q96LB1 330 aa7.11□□□□□ -1.27
KDM1A-204ENST00000481879 FAM217BQ9NTX9 383 aaPredicted RBP7.11□□□□□ -1.27
KDM1A-204ENST00000481879 GUCA2AQ02747 115 aa7.1□□□□□ -1.27
KDM1A-204ENST00000481879 KCNMA1Q12791 1236 aa7.1□□□□□ -1.27
KDM1A-204ENST00000481879 NUTM1Q86Y26 1132 aa7.1□□□□□ -1.27
KDM1A-204ENST00000481879 IRF7Q92985 503 aa7.1□□□□□ -1.27
KDM1A-204ENST00000481879 REPIN1Q9BWE0 567 aaKnown RBP7.1□□□□□ -1.27
KDM1A-204ENST00000481879 NXF1Q9UBU9 619 aaKnown RBP7.1□□□□□ -1.27
KDM1A-204ENST00000481879 GSK3AP49840 483 aa7.09□□□□□ -1.27
KDM1A-204ENST00000481879 SYMPKQ92797 1274 aaKnown RBP7.09□□□□□ -1.27
KDM1A-204ENST00000481879 KIFC2Q96AC6 838 aa7.09□□□□□ -1.27
KDM1A-204ENST00000481879 J3QL48 77 aa7.08□□□□□ -1.28
KDM1A-204ENST00000481879 JUNDP17535 347 aa7.08□□□□□ -1.28
KDM1A-204ENST00000481879 XP32Q5T750 250 aa7.08□□□□□ -1.28
KDM1A-204ENST00000481879 RC3H1Q5TC82 1133 aaKnown RBP7.08□□□□□ -1.28
KDM1A-204ENST00000481879 WNT7BP56706 349 aa7.07□□□□□ -1.28
KDM1A-204ENST00000481879 SKOR1P84550 965 aa7.07□□□□□ -1.28
KDM1A-204ENST00000481879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.07□□□□□ -1.28
KDM1A-204ENST00000481879 RETREG3Q86VR2 466 aa7.07□□□□□ -1.28
KDM1A-204ENST00000481879 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
KDM1A-204ENST00000481879 FDX1P10109 184 aa7.05□□□□□ -1.28
KDM1A-204ENST00000481879 SSTR3P32745 418 aaPredicted RBP7.05□□□□□ -1.28
KDM1A-204ENST00000481879 NPAS3Q8IXF0 933 aa7.05□□□□□ -1.28
KDM1A-204ENST00000481879 HPS1Q92902 700 aa7.05□□□□□ -1.28
KDM1A-204ENST00000481879 PTCRAQ6ISU1 281 aaPredicted RBP7.04□□□□□ -1.28
KDM1A-204ENST00000481879 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
KDM1A-204ENST00000481879 PCDHGC3Q9UN70 934 aa7.04□□□□□ -1.28
KDM1A-204ENST00000481879 C6orf229H3BNL8 230 aa7.03□□□□□ -1.28
KDM1A-204ENST00000481879 ERBB4Q15303 1308 aa7.02□□□□□ -1.28
KDM1A-204ENST00000481879 H3BM21 787 aa7.02□□□□□ -1.29
KDM1A-204ENST00000481879 ALDH1A1P00352 501 aa7.02□□□□□ -1.29
KDM1A-204ENST00000481879 TMEM151AQ8N4L1 468 aa7.02□□□□□ -1.29
KDM1A-204ENST00000481879 SPIRE2Q8WWL2 714 aa7.02□□□□□ -1.29
KDM1A-204ENST00000481879 MS4A1P11836 297 aa7.01□□□□□ -1.29
KDM1A-204ENST00000481879 NDUFV2P19404 249 aa7.01□□□□□ -1.29
KDM1A-204ENST00000481879 VEGFBP49765 207 aa7.01□□□□□ -1.29
KDM1A-204ENST00000481879 BARGINQ6ZT62 677 aa7.01□□□□□ -1.29
KDM1A-204ENST00000481879 EHBP1Q8NDI1 1231 aa7.01□□□□□ -1.29
KDM1A-204ENST00000481879 SIAH2O43255 324 aa7□□□□□ -1.29
KDM1A-204ENST00000481879 CCNYL3P0C7X3 344 aa7□□□□□ -1.29
KDM1A-204ENST00000481879 TTLL12Q14166 644 aaPredicted RBP7□□□□□ -1.29
KDM1A-204ENST00000481879 MOXD2PA6NHM9 499 aa6.99□□□□□ -1.29
KDM1A-204ENST00000481879 ZMYND10O75800 440 aa6.99□□□□□ -1.29
KDM1A-204ENST00000481879 SH3BP2P78314 561 aa6.99□□□□□ -1.29
KDM1A-204ENST00000481879 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
KDM1A-204ENST00000481879 GDF11O95390 407 aa6.98□□□□□ -1.29
KDM1A-204ENST00000481879 AMHR2Q16671 573 aa6.98□□□□□ -1.29
KDM1A-204ENST00000481879 PTPRNQ16849 979 aa6.98□□□□□ -1.29
KDM1A-204ENST00000481879 EVA1BQ9NVM1 165 aa6.98□□□□□ -1.29
KDM1A-204ENST00000481879 WASF2Q9Y6W5 498 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms