RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 NEFLP07196 543 aa21.3■■□□□ 1
RXRA-202ENST00000481739 ADAMTS13Q76LX8 1427 aa21.3■■□□□ 1
RXRA-202ENST00000481739 LRPPRCP42704 1394 aaKnown RBP21.29■■□□□ 1
RXRA-202ENST00000481739 INSRP06213 1382 aa21.29■■□□□ 1
RXRA-202ENST00000481739 PRAM1Q96QH2 718 aa21.29■■□□□ 1
RXRA-202ENST00000481739 KNSTRNQ9Y448 316 aa21.28■■□□□ 1
RXRA-202ENST00000481739 MYOM1P52179 1685 aa21.27■□□□□ 0.99
RXRA-202ENST00000481739 ABCC11Q96J66 1382 aa21.26■□□□□ 0.99
RXRA-202ENST00000481739 PUS7Q96PZ0 661 aaKnown RBP21.25■□□□□ 0.99
RXRA-202ENST00000481739 TBX22Q9Y458 520 aa21.25■□□□□ 0.99
RXRA-202ENST00000481739 DLC1Q96QB1 1528 aa21.24■□□□□ 0.99
RXRA-202ENST00000481739 MED14O60244 1454 aa21.23■□□□□ 0.99
RXRA-202ENST00000481739 WAPLQ7Z5K2 1190 aa21.23■□□□□ 0.99
RXRA-202ENST00000481739 MINK1Q8N4C8 1332 aaPredicted RBP21.23■□□□□ 0.99
RXRA-202ENST00000481739 CNGB1Q14028 1251 aaPredicted RBP21.22■□□□□ 0.99
RXRA-202ENST00000481739 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
RXRA-202ENST00000481739 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
RXRA-202ENST00000481739 DIP2AQ14689 1571 aa21.21■□□□□ 0.99
RXRA-202ENST00000481739 KNDC1Q76NI1 1749 aa21.2■□□□□ 0.98
RXRA-202ENST00000481739 AMER1Q5JTC6 1135 aaPredicted RBP21.2■□□□□ 0.98
RXRA-202ENST00000481739 CC2D1BQ5T0F9 858 aaKnown RBP21.2■□□□□ 0.98
RXRA-202ENST00000481739 NCKAP5LQ9HCH0 1330 aa21.19■□□□□ 0.98
RXRA-202ENST00000481739 PLEKHH1Q9ULM0 1364 aa21.18■□□□□ 0.98
RXRA-202ENST00000481739 AMOTL2Q9Y2J4 779 aa21.18■□□□□ 0.98
RXRA-202ENST00000481739 TECPR2O15040 1411 aa21.17■□□□□ 0.98
RXRA-202ENST00000481739 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
RXRA-202ENST00000481739 TULP4Q9NRJ4 1543 aa21.17■□□□□ 0.98
RXRA-202ENST00000481739 NPHP4O75161 1426 aaPredicted RBP21.17■□□□□ 0.98
RXRA-202ENST00000481739 PTPRUQ92729 1446 aa21.17■□□□□ 0.98
RXRA-202ENST00000481739 CPS1P31327 1500 aa21.16■□□□□ 0.98
RXRA-202ENST00000481739 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
RXRA-202ENST00000481739 FKBP8Q14318 412 aa21.16■□□□□ 0.98
RXRA-202ENST00000481739 CABP2Q9NPB3 220 aa21.15■□□□□ 0.98
RXRA-202ENST00000481739 FAM135BQ49AJ0 1406 aa21.15■□□□□ 0.98
RXRA-202ENST00000481739 SMG6Q86US8 1419 aaKnown RBP21.15■□□□□ 0.98
RXRA-202ENST00000481739 ROBO2Q9HCK4 1378 aa21.14■□□□□ 0.98
RXRA-202ENST00000481739 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
RXRA-202ENST00000481739 HSPA2P54652 639 aa21.13■□□□□ 0.97
RXRA-202ENST00000481739 CDK19Q9BWU1 502 aa21.12■□□□□ 0.97
RXRA-202ENST00000481739 NINLQ9Y2I6 1382 aa21.12■□□□□ 0.97
RXRA-202ENST00000481739 PIK3R4Q99570 1358 aa21.11■□□□□ 0.97
RXRA-202ENST00000481739 BLMP54132 1417 aaPredicted RBP21.1■□□□□ 0.97
RXRA-202ENST00000481739 PPP2R1AP30153 589 aa21.09■□□□□ 0.97
RXRA-202ENST00000481739 SLC12A5Q9H2X9 1139 aa21.08■□□□□ 0.97
RXRA-202ENST00000481739 USP32Q8NFA0 1604 aa21.08■□□□□ 0.97
RXRA-202ENST00000481739 KCNA6P17658 529 aa21.08■□□□□ 0.96
RXRA-202ENST00000481739 NUDCQ9Y266 331 aa21.08■□□□□ 0.96
RXRA-202ENST00000481739 XRN1Q8IZH2 1706 aaKnown RBP21.07■□□□□ 0.96
RXRA-202ENST00000481739 CHD2O14647 1828 aaKnown RBP21.07■□□□□ 0.96
RXRA-202ENST00000481739 PTCH1Q13635 1447 aa21.07■□□□□ 0.96
RXRA-202ENST00000481739 LMTK3Q96Q04 1460 aa21.06■□□□□ 0.96
RXRA-202ENST00000481739 WASLO00401 505 aaPredicted RBP21.06■□□□□ 0.96
RXRA-202ENST00000481739 PDE3BQ13370 1112 aa21.06■□□□□ 0.96
RXRA-202ENST00000481739 ATAD2Q6PL18 1390 aa21.06■□□□□ 0.96
RXRA-202ENST00000481739 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.04■□□□□ 0.96
RXRA-202ENST00000481739 CARD14Q9BXL6 1004 aa21.04■□□□□ 0.96
RXRA-202ENST00000481739 NSD2O96028 1365 aa21.03■□□□□ 0.96
RXRA-202ENST00000481739 ANKRD36BQ8N2N9 1353 aa21.03■□□□□ 0.96
RXRA-202ENST00000481739 NSD3Q9BZ95 1437 aa21.02■□□□□ 0.95
RXRA-202ENST00000481739 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
RXRA-202ENST00000481739 CGNL1Q0VF96 1302 aa20.99■□□□□ 0.95
RXRA-202ENST00000481739 ADGRB2O60241 1585 aa20.99■□□□□ 0.95
RXRA-202ENST00000481739 CABP1Q9NZU7 370 aa20.99■□□□□ 0.95
RXRA-202ENST00000481739 NUDT16Q96DE0 195 aaKnown RBP20.98■□□□□ 0.95
RXRA-202ENST00000481739 TERF2IPQ9NYB0 399 aa20.97■□□□□ 0.95
RXRA-202ENST00000481739 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
RXRA-202ENST00000481739 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
RXRA-202ENST00000481739 RNF123Q5XPI4 1314 aa20.95■□□□□ 0.95
RXRA-202ENST00000481739 HDGFL2Q7Z4V5 671 aaPredicted RBP20.95■□□□□ 0.94
RXRA-202ENST00000481739 POLR3AO14802 1390 aaPredicted RBP20.95■□□□□ 0.94
RXRA-202ENST00000481739 STRCQ7RTU9 1775 aa20.95■□□□□ 0.94
RXRA-202ENST00000481739 PPIP5K1Q6PFW1 1433 aa20.94■□□□□ 0.94
RXRA-202ENST00000481739 C14orf37Q86TY3 774 aa20.94■□□□□ 0.94
RXRA-202ENST00000481739 A0A1W2PP64 1363 aa20.94■□□□□ 0.94
RXRA-202ENST00000481739 NGEFQ8N5V2 710 aa20.93■□□□□ 0.94
RXRA-202ENST00000481739 CCDC61Q9Y6R9 512 aa20.93■□□□□ 0.94
RXRA-202ENST00000481739 NWD1Q149M9 1564 aa20.93■□□□□ 0.94
RXRA-202ENST00000481739 PROSER2Q86WR7 435 aaPredicted RBP20.92■□□□□ 0.94
RXRA-202ENST00000481739 ADAMTS8Q9UP79 889 aa20.92■□□□□ 0.94
RXRA-202ENST00000481739 MORC1Q86VD1 984 aa20.92■□□□□ 0.94
RXRA-202ENST00000481739 PRR36Q9H6K5 1346 aa20.91■□□□□ 0.94
RXRA-202ENST00000481739 ATP7BP35670 1465 aa20.91■□□□□ 0.94
RXRA-202ENST00000481739 CD163L1Q9NR16 1453 aa20.9■□□□□ 0.94
RXRA-202ENST00000481739 NALCNQ8IZF0 1738 aa20.9■□□□□ 0.94
RXRA-202ENST00000481739 PPP4R2Q9NY27 417 aa20.88■□□□□ 0.93
RXRA-202ENST00000481739 NKTRP30414 1462 aaKnown RBP20.86■□□□□ 0.93
RXRA-202ENST00000481739 ADGRL3Q9HAR2 1447 aa20.86■□□□□ 0.93
RXRA-202ENST00000481739 CDC42BPGQ6DT37 1551 aa20.85■□□□□ 0.93
RXRA-202ENST00000481739 ITSN1Q15811 1721 aa20.85■□□□□ 0.93
RXRA-202ENST00000481739 FMN2Q9NZ56 1722 aa20.85■□□□□ 0.93
RXRA-202ENST00000481739 STRCP1A6NGW2 1772 aa20.85■□□□□ 0.93
RXRA-202ENST00000481739 RGPD8O14715 1765 aaPredicted RBP20.85■□□□□ 0.93
RXRA-202ENST00000481739 TOPAZ1Q8N9V7 1692 aa20.85■□□□□ 0.93
RXRA-202ENST00000481739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.83■□□□□ 0.93
RXRA-202ENST00000481739 CFAP53Q96M91 514 aa20.83■□□□□ 0.93
RXRA-202ENST00000481739 PLEKHG3A1L390 1219 aa20.83■□□□□ 0.92
RXRA-202ENST00000481739 PMFBP1Q8TBY8 1022 aa20.83■□□□□ 0.92
RXRA-202ENST00000481739 ZNF692Q9BU19 519 aaPredicted RBP20.83■□□□□ 0.92
RXRA-202ENST00000481739 CPSF1Q10570 1443 aaKnown RBP20.82■□□□□ 0.92
RXRA-202ENST00000481739 ANKARQ7Z5J8 1434 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms