RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
PHF3-204ENST00000481385 STK26Q9P289 416 aa18.48■□□□□ 0.55
PHF3-204ENST00000481385 TMEM131LA2VDJ0 1609 aa18.47■□□□□ 0.55
PHF3-204ENST00000481385 FAM69CQ0P6D2 419 aa18.47■□□□□ 0.55
PHF3-204ENST00000481385 SLC52A1Q9NWF4 448 aa18.47■□□□□ 0.55
PHF3-204ENST00000481385 EVC2Q86UK5 1308 aa18.46■□□□□ 0.55
PHF3-204ENST00000481385 USP32Q8NFA0 1604 aa18.45■□□□□ 0.54
PHF3-204ENST00000481385 ZFYVE9O95405 1425 aa18.45■□□□□ 0.54
PHF3-204ENST00000481385 NKTRP30414 1462 aaKnown RBP18.44■□□□□ 0.54
PHF3-204ENST00000481385 ANKRD36BQ8N2N9 1353 aa18.43■□□□□ 0.54
PHF3-204ENST00000481385 BCAR3O75815 825 aa18.43■□□□□ 0.54
PHF3-204ENST00000481385 DIP2BQ9P265 1576 aa18.43■□□□□ 0.54
PHF3-204ENST00000481385 CGNL1Q0VF96 1302 aa18.43■□□□□ 0.54
PHF3-204ENST00000481385 MTHFSP49914 203 aa18.43■□□□□ 0.54
PHF3-204ENST00000481385 RIMBP3CA6NJZ7 1639 aa18.43■□□□□ 0.54
PHF3-204ENST00000481385 RIMBP3BA6NNM3 1639 aa18.43■□□□□ 0.54
PHF3-204ENST00000481385 RIMBP3Q9UFD9 1639 aa18.43■□□□□ 0.54
PHF3-204ENST00000481385 TCERG1O14776 1098 aaKnown RBP18.42■□□□□ 0.54
PHF3-204ENST00000481385 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
PHF3-204ENST00000481385 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
PHF3-204ENST00000481385 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
PHF3-204ENST00000481385 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
PHF3-204ENST00000481385 PTPRMP28827 1452 aa18.42■□□□□ 0.54
PHF3-204ENST00000481385 TSPOAP1O95153 1857 aa18.41■□□□□ 0.54
PHF3-204ENST00000481385 E9PSI1 815 aa18.41■□□□□ 0.54
PHF3-204ENST00000481385 KDM2BQ8NHM5 1336 aa18.41■□□□□ 0.54
PHF3-204ENST00000481385 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
PHF3-204ENST00000481385 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
PHF3-204ENST00000481385 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
PHF3-204ENST00000481385 IQSEC2Q5JU85 1478 aa18.4■□□□□ 0.54
PHF3-204ENST00000481385 PDE4AP27815 886 aa18.39■□□□□ 0.53
PHF3-204ENST00000481385 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
PHF3-204ENST00000481385 MINK1Q8N4C8 1332 aaPredicted RBP18.38■□□□□ 0.53
PHF3-204ENST00000481385 SRPK2P78362 688 aaKnown RBP18.38■□□□□ 0.53
PHF3-204ENST00000481385 NOP58Q9Y2X3 529 aaKnown RBP18.37■□□□□ 0.53
PHF3-204ENST00000481385 YTHDC2Q9H6S0 1430 aaKnown RBP18.37■□□□□ 0.53
PHF3-204ENST00000481385 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
PHF3-204ENST00000481385 RUNDC1Q96C34 613 aa18.36■□□□□ 0.53
PHF3-204ENST00000481385 BACH2Q9BYV9 841 aa18.36■□□□□ 0.53
PHF3-204ENST00000481385 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
PHF3-204ENST00000481385 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
PHF3-204ENST00000481385 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.35■□□□□ 0.53
PHF3-204ENST00000481385 IPO9Q96P70 1041 aaKnown RBP18.35■□□□□ 0.53
PHF3-204ENST00000481385 ALKQ9UM73 1620 aa18.35■□□□□ 0.53
PHF3-204ENST00000481385 MS4A1P11836 297 aa18.35■□□□□ 0.53
PHF3-204ENST00000481385 ABCC11Q96J66 1382 aa18.35■□□□□ 0.53
PHF3-204ENST00000481385 PHF23Q9BUL5 403 aaPredicted RBP18.34■□□□□ 0.53
PHF3-204ENST00000481385 GGNBP2Q9H3C7 697 aa18.34■□□□□ 0.53
PHF3-204ENST00000481385 NGEFQ8N5V2 710 aa18.34■□□□□ 0.53
PHF3-204ENST00000481385 NSD2O96028 1365 aa18.34■□□□□ 0.53
PHF3-204ENST00000481385 NPM2Q86SE8 214 aaKnown RBP18.33■□□□□ 0.53
PHF3-204ENST00000481385 CLTCQ00610 1675 aaKnown RBP18.33■□□□□ 0.52
PHF3-204ENST00000481385 POGKQ9P215 609 aa18.32■□□□□ 0.52
PHF3-204ENST00000481385 MLECQ14165 292 aa18.32■□□□□ 0.52
PHF3-204ENST00000481385 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
PHF3-204ENST00000481385 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
PHF3-204ENST00000481385 NLRP1Q9C000 1473 aa18.31■□□□□ 0.52
PHF3-204ENST00000481385 CENPQQ7L2Z9 268 aaPredicted RBP18.3■□□□□ 0.52
PHF3-204ENST00000481385 REREQ9P2R6 1566 aa18.3■□□□□ 0.52
PHF3-204ENST00000481385 A2ML1A8K2U0 1454 aa18.3■□□□□ 0.52
PHF3-204ENST00000481385 AGLP35573 1532 aa18.3■□□□□ 0.52
PHF3-204ENST00000481385 FYB1O15117 783 aa18.3■□□□□ 0.52
PHF3-204ENST00000481385 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
PHF3-204ENST00000481385 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHF3-204ENST00000481385 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
PHF3-204ENST00000481385 ARHGEF40Q8TER5 1519 aa18.29■□□□□ 0.52
PHF3-204ENST00000481385 CDK19Q9BWU1 502 aa18.29■□□□□ 0.52
PHF3-204ENST00000481385 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
PHF3-204ENST00000481385 WAPLQ7Z5K2 1190 aa18.28■□□□□ 0.52
PHF3-204ENST00000481385 PANK1Q8TE04 598 aa18.28■□□□□ 0.52
PHF3-204ENST00000481385 COL3A1P02461 1466 aaPredicted RBP18.27■□□□□ 0.52
PHF3-204ENST00000481385 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.51
PHF3-204ENST00000481385 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
PHF3-204ENST00000481385 TNNQ9UQP3 1299 aa18.26■□□□□ 0.51
PHF3-204ENST00000481385 ADGRB2O60241 1585 aa18.26■□□□□ 0.51
PHF3-204ENST00000481385 RARSP54136 660 aaKnown RBP18.25■□□□□ 0.51
PHF3-204ENST00000481385 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
PHF3-204ENST00000481385 IGHDP01880 384 aa18.25■□□□□ 0.51
PHF3-204ENST00000481385 CCDC27Q2M243 656 aa18.25■□□□□ 0.51
PHF3-204ENST00000481385 BCL2L13Q9BXK5 485 aa18.25■□□□□ 0.51
PHF3-204ENST00000481385 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
PHF3-204ENST00000481385 COG6Q9Y2V7 657 aa18.25■□□□□ 0.51
PHF3-204ENST00000481385 RIMS2Q9UQ26 1411 aa18.24■□□□□ 0.51
PHF3-204ENST00000481385 SETD1AO15047 1707 aaKnown RBP18.24■□□□□ 0.51
PHF3-204ENST00000481385 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
PHF3-204ENST00000481385 PLEKHF1Q96S99 279 aa18.24■□□□□ 0.51
PHF3-204ENST00000481385 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
PHF3-204ENST00000481385 U2SURPO15042 1029 aaKnown RBP18.23■□□□□ 0.51
PHF3-204ENST00000481385 PDE3AQ14432 1141 aa18.23■□□□□ 0.51
PHF3-204ENST00000481385 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
PHF3-204ENST00000481385 FBLN1P23142 703 aa18.22■□□□□ 0.51
PHF3-204ENST00000481385 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
PHF3-204ENST00000481385 RLBP1P12271 317 aa18.22■□□□□ 0.51
PHF3-204ENST00000481385 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
PHF3-204ENST00000481385 MED14O60244 1454 aa18.21■□□□□ 0.51
PHF3-204ENST00000481385 RGS3P49796 1198 aa18.2■□□□□ 0.5
PHF3-204ENST00000481385 NBR1Q14596 966 aa18.2■□□□□ 0.5
PHF3-204ENST00000481385 NRXN3Q9Y4C0 1643 aa18.2■□□□□ 0.5
PHF3-204ENST00000481385 C8orf34Q49A92 452 aa18.19■□□□□ 0.5
PHF3-204ENST00000481385 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms