RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
CHCHD3-205ENST00000481152 NDUFV2P19404 249 aa9.59□□□□□ -0.87
CHCHD3-205ENST00000481152 TBC1D2Q9BYX2 928 aa9.59□□□□□ -0.87
CHCHD3-205ENST00000481152 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
CHCHD3-205ENST00000481152 DIXDC1Q155Q3 683 aa9.58□□□□□ -0.88
CHCHD3-205ENST00000481152 LIAT1Q6ZQX7 453 aa9.58□□□□□ -0.88
CHCHD3-205ENST00000481152 SYMPKQ92797 1274 aaKnown RBP9.58□□□□□ -0.88
CHCHD3-205ENST00000481152 MMP16P51512 607 aa9.57□□□□□ -0.88
CHCHD3-205ENST00000481152 DXOO77932 396 aaKnown RBP9.56□□□□□ -0.88
CHCHD3-205ENST00000481152 SPRYD7Q5W111 196 aa9.56□□□□□ -0.88
CHCHD3-205ENST00000481152 NISCHQ9Y2I1 1504 aa9.56□□□□□ -0.88
CHCHD3-205ENST00000481152 C6orf229H3BNL8 230 aa9.55□□□□□ -0.88
CHCHD3-205ENST00000481152 RETREG3Q86VR2 466 aa9.55□□□□□ -0.88
CHCHD3-205ENST00000481152 RSBN1LQ6PCB5 846 aaPredicted RBP9.54□□□□□ -0.88
CHCHD3-205ENST00000481152 GFRA3O60609 400 aa9.53□□□□□ -0.88
CHCHD3-205ENST00000481152 GJA5P36382 358 aa9.53□□□□□ -0.88
CHCHD3-205ENST00000481152 ZNF598Q86UK7 904 aaKnown RBP9.53□□□□□ -0.88
CHCHD3-205ENST00000481152 SPTLC1O15269 473 aa9.52□□□□□ -0.88
CHCHD3-205ENST00000481152 RPIAP49247 311 aa9.52□□□□□ -0.88
CHCHD3-205ENST00000481152 LAPTM4AQ15012 233 aa9.52□□□□□ -0.88
CHCHD3-205ENST00000481152 JUNDP17535 347 aa9.51□□□□□ -0.89
CHCHD3-205ENST00000481152 ZNF697Q5TEC3 545 aa9.51□□□□□ -0.89
CHCHD3-205ENST00000481152 GPBP1L1Q9HC44 474 aaPredicted RBP9.51□□□□□ -0.89
CHCHD3-205ENST00000481152 MTMR2Q13614 643 aa9.5□□□□□ -0.89
CHCHD3-205ENST00000481152 MYSM1Q5VVJ2 828 aa9.5□□□□□ -0.89
CHCHD3-205ENST00000481152 RIC3Q7Z5B4 369 aa9.5□□□□□ -0.89
CHCHD3-205ENST00000481152 KDM4CQ9H3R0 1056 aa9.5□□□□□ -0.89
CHCHD3-205ENST00000481152 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
CHCHD3-205ENST00000481152 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
CHCHD3-205ENST00000481152 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
CHCHD3-205ENST00000481152 SPDYE5A6NIY4 337 aa9.49□□□□□ -0.89
CHCHD3-205ENST00000481152 NRG2O14511 850 aaPredicted RBP9.49□□□□□ -0.89
CHCHD3-205ENST00000481152 PRR7Q8TB68 274 aa9.49□□□□□ -0.89
CHCHD3-205ENST00000481152 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
CHCHD3-205ENST00000481152 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
CHCHD3-205ENST00000481152 Q6ZNB5 142 aa9.47□□□□□ -0.89
CHCHD3-205ENST00000481152 CCDC24Q8N4L8 307 aa9.47□□□□□ -0.89
CHCHD3-205ENST00000481152 ZBTB3Q9H5J0 574 aa9.47□□□□□ -0.89
CHCHD3-205ENST00000481152 LIMD1Q9UGP4 676 aa9.47□□□□□ -0.89
CHCHD3-205ENST00000481152 PRR20EP86478 221 aa9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 PRR20CP86479 221 aa9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 PRR20DP86480 221 aa9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 PRR20BP86481 221 aa9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 PRR20AP86496 221 aa9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 CSPP1Q1MSJ5 1256 aa9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 NUDT12Q9BQG2 462 aa9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
CHCHD3-205ENST00000481152 GDF9O60383 454 aa9.45□□□□□ -0.9
CHCHD3-205ENST00000481152 HRCP23327 699 aa9.45□□□□□ -0.9
CHCHD3-205ENST00000481152 TRIM32Q13049 653 aa9.45□□□□□ -0.9
CHCHD3-205ENST00000481152 TUSC1Q2TAM9 212 aa9.45□□□□□ -0.9
CHCHD3-205ENST00000481152 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
CHCHD3-205ENST00000481152 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
CHCHD3-205ENST00000481152 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
CHCHD3-205ENST00000481152 TNFRSF10AO00220 468 aa9.44□□□□□ -0.9
CHCHD3-205ENST00000481152 CLK2P49760 499 aaKnown RBP9.44□□□□□ -0.9
CHCHD3-205ENST00000481152 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
CHCHD3-205ENST00000481152 DDRGK1Q96HY6 314 aa9.44□□□□□ -0.9
CHCHD3-205ENST00000481152 CFAP99D6REC4 459 aa9.43□□□□□ -0.9
CHCHD3-205ENST00000481152 CCNYL3P0C7X3 344 aa9.43□□□□□ -0.9
CHCHD3-205ENST00000481152 FOXC1Q12948 553 aa9.43□□□□□ -0.9
CHCHD3-205ENST00000481152 PTPRNQ16849 979 aa9.43□□□□□ -0.9
CHCHD3-205ENST00000481152 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
CHCHD3-205ENST00000481152 QPCTQ16769 361 aa9.42□□□□□ -0.9
CHCHD3-205ENST00000481152 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
CHCHD3-205ENST00000481152 PLEKHG3A1L390 1219 aa9.4□□□□□ -0.9
CHCHD3-205ENST00000481152 NUTM2BA6NNL0 878 aaPredicted RBP9.4□□□□□ -0.9
CHCHD3-205ENST00000481152 NUTM2EB1AL46 878 aaPredicted RBP9.4□□□□□ -0.9
CHCHD3-205ENST00000481152 LILRB3O75022 631 aa9.4□□□□□ -0.9
CHCHD3-205ENST00000481152 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.9
CHCHD3-205ENST00000481152 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
CHCHD3-205ENST00000481152 NUTM2AQ8IVF1 878 aaPredicted RBP9.4□□□□□ -0.9
CHCHD3-205ENST00000481152 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
CHCHD3-205ENST00000481152 SH3D19Q5HYK7 790 aa9.39□□□□□ -0.91
CHCHD3-205ENST00000481152 LYPD8Q6UX82 237 aa9.38□□□□□ -0.91
CHCHD3-205ENST00000481152 EVA1BQ9NVM1 165 aa9.38□□□□□ -0.91
CHCHD3-205ENST00000481152 WNT7AO00755 349 aa9.37□□□□□ -0.91
CHCHD3-205ENST00000481152 LCE2BO14633 110 aa9.37□□□□□ -0.91
CHCHD3-205ENST00000481152 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
CHCHD3-205ENST00000481152 WNT7BP56706 349 aa9.37□□□□□ -0.91
CHCHD3-205ENST00000481152 KCNH2Q12809 1159 aa9.37□□□□□ -0.91
CHCHD3-205ENST00000481152 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
CHCHD3-205ENST00000481152 BRPF1P55201 1214 aaPredicted RBP9.36□□□□□ -0.91
CHCHD3-205ENST00000481152 SKOR1P84550 965 aa9.36□□□□□ -0.91
CHCHD3-205ENST00000481152 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
CHCHD3-205ENST00000481152 TRAF7Q6Q0C0 670 aa9.36□□□□□ -0.91
CHCHD3-205ENST00000481152 TSC1Q92574 1164 aa9.36□□□□□ -0.91
CHCHD3-205ENST00000481152 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
CHCHD3-205ENST00000481152 FAM187AA6NFU0 413 aa9.35□□□□□ -0.91
CHCHD3-205ENST00000481152 CYP4X1Q8N118 509 aa9.35□□□□□ -0.91
CHCHD3-205ENST00000481152 TOR4AQ9NXH8 423 aa9.35□□□□□ -0.91
CHCHD3-205ENST00000481152 PER1O15534 1290 aaPredicted RBP9.34□□□□□ -0.91
CHCHD3-205ENST00000481152 DGAT1O75907 488 aa9.34□□□□□ -0.91
CHCHD3-205ENST00000481152 PROCA1Q8NCQ7 364 aaPredicted RBP9.34□□□□□ -0.91
CHCHD3-205ENST00000481152 MRGPRX2Q96LB1 330 aa9.34□□□□□ -0.91
CHCHD3-205ENST00000481152 F12P00748 615 aaPredicted RBP9.33□□□□□ -0.92
CHCHD3-205ENST00000481152 CTHP32929 405 aa9.33□□□□□ -0.92
CHCHD3-205ENST00000481152 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
CHCHD3-205ENST00000481152 HELBQ8NG08 1087 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms