RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 RARSP54136 660 aaKnown RBP18.25■□□□□ 0.51
NR1H3-220ENST00000481020 PUS7Q96PZ0 661 aaKnown RBP18.23■□□□□ 0.51
NR1H3-220ENST00000481020 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
NR1H3-220ENST00000481020 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
NR1H3-220ENST00000481020 SPAG9O60271 1321 aaKnown RBP18.22■□□□□ 0.51
NR1H3-220ENST00000481020 ABCA6Q8N139 1617 aa18.22■□□□□ 0.51
NR1H3-220ENST00000481020 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
NR1H3-220ENST00000481020 TRAPPC8Q9Y2L5 1435 aa18.21■□□□□ 0.51
NR1H3-220ENST00000481020 FSD2A1L4K1 749 aa18.21■□□□□ 0.51
NR1H3-220ENST00000481020 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
NR1H3-220ENST00000481020 POGKQ9P215 609 aa18.21■□□□□ 0.51
NR1H3-220ENST00000481020 NSD2O96028 1365 aa18.21■□□□□ 0.51
NR1H3-220ENST00000481020 IFT172Q9UG01 1749 aa18.21■□□□□ 0.51
NR1H3-220ENST00000481020 SEC24BO95487 1268 aa18.2■□□□□ 0.5
NR1H3-220ENST00000481020 PANK1Q8TE04 598 aa18.2■□□□□ 0.5
NR1H3-220ENST00000481020 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
NR1H3-220ENST00000481020 TBC1D2Q9BYX2 928 aa18.19■□□□□ 0.5
NR1H3-220ENST00000481020 CHMP5Q9NZZ3 219 aa18.19■□□□□ 0.5
NR1H3-220ENST00000481020 INO80Q9ULG1 1556 aaPredicted RBP18.18■□□□□ 0.5
NR1H3-220ENST00000481020 FANCAO15360 1455 aa18.18■□□□□ 0.5
NR1H3-220ENST00000481020 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
NR1H3-220ENST00000481020 NPM1P06748 294 aaKnown RBP eCLIP18.18■□□□□ 0.5
NR1H3-220ENST00000481020 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
NR1H3-220ENST00000481020 PDZRN3Q9UPQ7 1066 aa18.18■□□□□ 0.5
NR1H3-220ENST00000481020 ZNF518AQ6AHZ1 1483 aa18.17■□□□□ 0.5
NR1H3-220ENST00000481020 LMTK2Q8IWU2 1503 aa18.17■□□□□ 0.5
NR1H3-220ENST00000481020 PTMSP20962 102 aa18.17■□□□□ 0.5
NR1H3-220ENST00000481020 MCM4P33991 863 aa18.17■□□□□ 0.5
NR1H3-220ENST00000481020 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
NR1H3-220ENST00000481020 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
NR1H3-220ENST00000481020 KIF1BO60333 1816 aa18.16■□□□□ 0.5
NR1H3-220ENST00000481020 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
NR1H3-220ENST00000481020 HDAC1Q13547 482 aaPredicted RBP18.15■□□□□ 0.5
NR1H3-220ENST00000481020 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
NR1H3-220ENST00000481020 PCDHB15Q9Y5E8 787 aa18.15■□□□□ 0.5
NR1H3-220ENST00000481020 ATP7AQ04656 1500 aa18.15■□□□□ 0.5
NR1H3-220ENST00000481020 ADGRB2O60241 1585 aa18.15■□□□□ 0.5
NR1H3-220ENST00000481020 MRE11P49959 708 aa18.15■□□□□ 0.5
NR1H3-220ENST00000481020 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
NR1H3-220ENST00000481020 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
NR1H3-220ENST00000481020 RIMBP3CA6NJZ7 1639 aa18.14■□□□□ 0.49
NR1H3-220ENST00000481020 RIMBP3BA6NNM3 1639 aa18.14■□□□□ 0.49
NR1H3-220ENST00000481020 RIMBP3Q9UFD9 1639 aa18.14■□□□□ 0.49
NR1H3-220ENST00000481020 TCP11L2Q8N4U5 519 aa18.14■□□□□ 0.49
NR1H3-220ENST00000481020 EFCAB6Q5THR3 1501 aa18.14■□□□□ 0.49
NR1H3-220ENST00000481020 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
NR1H3-220ENST00000481020 CLCN1P35523 988 aa18.13■□□□□ 0.49
NR1H3-220ENST00000481020 ZKSCAN2Q63HK3 967 aa18.13■□□□□ 0.49
NR1H3-220ENST00000481020 ZC3H13Q5T200 1668 aaKnown RBP18.13■□□□□ 0.49
NR1H3-220ENST00000481020 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
NR1H3-220ENST00000481020 CIZ1Q9ULV3 898 aaPredicted RBP18.12■□□□□ 0.49
NR1H3-220ENST00000481020 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
NR1H3-220ENST00000481020 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
NR1H3-220ENST00000481020 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
NR1H3-220ENST00000481020 C22orf23Q9BZE7 217 aa18.11■□□□□ 0.49
NR1H3-220ENST00000481020 DNAJC5Q9H3Z4 198 aa18.11■□□□□ 0.49
NR1H3-220ENST00000481020 IL16Q14005 1332 aa18.1■□□□□ 0.49
NR1H3-220ENST00000481020 ABCC11Q96J66 1382 aa18.1■□□□□ 0.49
NR1H3-220ENST00000481020 MROH1Q8NDA8 1641 aa18.1■□□□□ 0.49
NR1H3-220ENST00000481020 XRCC6P12956 609 aaKnown RBP eCLIP18.09■□□□□ 0.49
NR1H3-220ENST00000481020 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
NR1H3-220ENST00000481020 SNX21Q969T3 373 aa18.09■□□□□ 0.49
NR1H3-220ENST00000481020 DDX19BQ9UMR2 479 aa18.09■□□□□ 0.49
NR1H3-220ENST00000481020 ABCA9Q8IUA7 1624 aa18.09■□□□□ 0.49
NR1H3-220ENST00000481020 RLBP1P12271 317 aa18.09■□□□□ 0.49
NR1H3-220ENST00000481020 CYB5RLQ6IPT4 315 aa18.09■□□□□ 0.49
NR1H3-220ENST00000481020 RPGRIP1LQ68CZ1 1315 aa18.08■□□□□ 0.48
NR1H3-220ENST00000481020 GLIPR1L2Q4G1C9 344 aa18.08■□□□□ 0.48
NR1H3-220ENST00000481020 RRAGDQ9NQL2 400 aaPredicted RBP18.08■□□□□ 0.48
NR1H3-220ENST00000481020 ADGRF5Q8IZF2 1346 aa18.07■□□□□ 0.48
NR1H3-220ENST00000481020 HSCBQ8IWL3 235 aa18.07■□□□□ 0.48
NR1H3-220ENST00000481020 KIF16BQ96L93 1317 aa18.07■□□□□ 0.48
NR1H3-220ENST00000481020 TRAK2O60296 914 aa18.06■□□□□ 0.48
NR1H3-220ENST00000481020 RBM25P49756 843 aaKnown RBP18.06■□□□□ 0.48
NR1H3-220ENST00000481020 SKOR2Q2VWA4 1001 aaPredicted RBP18.06■□□□□ 0.48
NR1H3-220ENST00000481020 SMC5Q8IY18 1101 aa18.06■□□□□ 0.48
NR1H3-220ENST00000481020 FTSJ3Q8IY81 847 aaKnown RBP18.06■□□□□ 0.48
NR1H3-220ENST00000481020 QRICH2Q9H0J4 1663 aa18.05■□□□□ 0.48
NR1H3-220ENST00000481020 PNNQ9H307 717 aaKnown RBP18.05■□□□□ 0.48
NR1H3-220ENST00000481020 CHMP4BQ9H444 224 aaKnown RBP18.05■□□□□ 0.48
NR1H3-220ENST00000481020 ADGRB1O14514 1584 aa18.05■□□□□ 0.48
NR1H3-220ENST00000481020 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
NR1H3-220ENST00000481020 DDIT3P35638 169 aa18.04■□□□□ 0.48
NR1H3-220ENST00000481020 C14orf93Q9H972 538 aaKnown RBP18.04■□□□□ 0.48
NR1H3-220ENST00000481020 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
NR1H3-220ENST00000481020 ZNF428Q96B54 188 aa18.03■□□□□ 0.48
NR1H3-220ENST00000481020 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
NR1H3-220ENST00000481020 MTHFSP49914 203 aa18.01■□□□□ 0.47
NR1H3-220ENST00000481020 GBP4Q96PP9 640 aa18.01■□□□□ 0.47
NR1H3-220ENST00000481020 MROH2AA6NES4 1674 aa18.01■□□□□ 0.47
NR1H3-220ENST00000481020 AFAP1Q8N556 730 aa18.01■□□□□ 0.47
NR1H3-220ENST00000481020 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
NR1H3-220ENST00000481020 MED14O60244 1454 aa18■□□□□ 0.47
NR1H3-220ENST00000481020 PPLO60437 1756 aa18■□□□□ 0.47
NR1H3-220ENST00000481020 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
NR1H3-220ENST00000481020 KIF3BO15066 747 aa18■□□□□ 0.47
NR1H3-220ENST00000481020 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
NR1H3-220ENST00000481020 CFAP44Q96MT7 982 aa18■□□□□ 0.47
NR1H3-220ENST00000481020 NOS1P29475 1434 aa17.99■□□□□ 0.47
NR1H3-220ENST00000481020 BRPF1P55201 1214 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms