RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
CALD1-219ENST00000480638 BRICD5Q6PL45 260 aa11.53□□□□□ -0.56
CALD1-219ENST00000480638 PCDHB15Q9Y5E8 787 aa11.53□□□□□ -0.56
CALD1-219ENST00000480638 ADH1BP00325 375 aa11.52□□□□□ -0.57
CALD1-219ENST00000480638 CSPP1Q1MSJ5 1256 aa11.52□□□□□ -0.57
CALD1-219ENST00000480638 TUSC1Q2TAM9 212 aa11.52□□□□□ -0.57
CALD1-219ENST00000480638 IFFO2Q5TF58 517 aa11.52□□□□□ -0.57
CALD1-219ENST00000480638 NKX2-3Q8TAU0 364 aa11.52□□□□□ -0.57
CALD1-219ENST00000480638 SYMPKQ92797 1274 aaKnown RBP11.51□□□□□ -0.57
CALD1-219ENST00000480638 SPSB2Q99619 263 aa11.51□□□□□ -0.57
CALD1-219ENST00000480638 C6orf229H3BNL8 230 aa11.5□□□□□ -0.57
CALD1-219ENST00000480638 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
CALD1-219ENST00000480638 MTMR2Q13614 643 aa11.49□□□□□ -0.57
CALD1-219ENST00000480638 QPCTQ16769 361 aa11.49□□□□□ -0.57
CALD1-219ENST00000480638 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.49□□□□□ -0.57
CALD1-219ENST00000480638 ZBTB3Q9H5J0 574 aa11.49□□□□□ -0.57
CALD1-219ENST00000480638 PRPF38BQ5VTL8 546 aaKnown RBP11.48□□□□□ -0.57
CALD1-219ENST00000480638 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
CALD1-219ENST00000480638 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
CALD1-219ENST00000480638 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
CALD1-219ENST00000480638 HRCP23327 699 aa11.47□□□□□ -0.57
CALD1-219ENST00000480638 MSS51Q4VC12 460 aa11.47□□□□□ -0.57
CALD1-219ENST00000480638 RETREG3Q86VR2 466 aa11.47□□□□□ -0.57
CALD1-219ENST00000480638 LILRB3O75022 631 aa11.46□□□□□ -0.57
CALD1-219ENST00000480638 TMEM132AQ24JP5 1023 aa11.46□□□□□ -0.57
CALD1-219ENST00000480638 FAM160A2Q8N612 972 aaPredicted RBP11.46□□□□□ -0.57
CALD1-219ENST00000480638 PRDM9Q9NQV7 894 aa11.45□□□□□ -0.58
CALD1-219ENST00000480638 ATP1B4Q9UN42 357 aaPredicted RBP11.45□□□□□ -0.58
CALD1-219ENST00000480638 SPDYE5A6NIY4 337 aa11.44□□□□□ -0.58
CALD1-219ENST00000480638 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
CALD1-219ENST00000480638 SLC6A16Q9GZN6 736 aa11.44□□□□□ -0.58
CALD1-219ENST00000480638 S1PR4O95977 384 aa11.43□□□□□ -0.58
CALD1-219ENST00000480638 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
CALD1-219ENST00000480638 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
CALD1-219ENST00000480638 NUTM2DQ5VT03 806 aaPredicted RBP11.42□□□□□ -0.58
CALD1-219ENST00000480638 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
CALD1-219ENST00000480638 PRR7Q8TB68 274 aa11.42□□□□□ -0.58
CALD1-219ENST00000480638 A0A0G2JS52 829 aa11.41□□□□□ -0.58
CALD1-219ENST00000480638 CFAP99D6REC4 459 aa11.41□□□□□ -0.58
CALD1-219ENST00000480638 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
CALD1-219ENST00000480638 PPP2R2DQ66LE6 453 aa11.41□□□□□ -0.58
CALD1-219ENST00000480638 PPP1R18Q6NYC8 613 aa11.41□□□□□ -0.58
CALD1-219ENST00000480638 JUNDP17535 347 aa11.39□□□□□ -0.59
CALD1-219ENST00000480638 MMP16P51512 607 aa11.39□□□□□ -0.59
CALD1-219ENST00000480638 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
CALD1-219ENST00000480638 GGCXP38435 758 aa11.38□□□□□ -0.59
CALD1-219ENST00000480638 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.38□□□□□ -0.59
CALD1-219ENST00000480638 DESI1Q6ICB0 168 aa11.37□□□□□ -0.59
CALD1-219ENST00000480638 RNF223E7ERA6 249 aa11.36□□□□□ -0.59
CALD1-219ENST00000480638 RFC5P40937 340 aa11.36□□□□□ -0.59
CALD1-219ENST00000480638 PPEF1O14829 653 aaPredicted RBP11.35□□□□□ -0.59
CALD1-219ENST00000480638 TSC1Q92574 1164 aa11.35□□□□□ -0.59
CALD1-219ENST00000480638 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
CALD1-219ENST00000480638 HELBQ8NG08 1087 aaPredicted RBP11.33□□□□□ -0.6
CALD1-219ENST00000480638 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
CALD1-219ENST00000480638 PTPRNQ16849 979 aa11.31□□□□□ -0.6
CALD1-219ENST00000480638 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
CALD1-219ENST00000480638 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
CALD1-219ENST00000480638 AP1G2O75843 785 aa11.29□□□□□ -0.6
CALD1-219ENST00000480638 LYPD8Q6UX82 237 aa11.29□□□□□ -0.6
CALD1-219ENST00000480638 CCNYL3P0C7X3 344 aa11.28□□□□□ -0.6
CALD1-219ENST00000480638 CTDSPL2Q05D32 466 aa11.28□□□□□ -0.6
CALD1-219ENST00000480638 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
CALD1-219ENST00000480638 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.61
CALD1-219ENST00000480638 USP17L8P0C7I0 530 aa11.26□□□□□ -0.61
CALD1-219ENST00000480638 CCDC24Q8N4L8 307 aa11.26□□□□□ -0.61
CALD1-219ENST00000480638 F12P00748 615 aaPredicted RBP11.25□□□□□ -0.61
CALD1-219ENST00000480638 LRRN4Q8WUT4 740 aa11.24□□□□□ -0.61
CALD1-219ENST00000480638 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
CALD1-219ENST00000480638 EVA1BQ9NVM1 165 aa11.23□□□□□ -0.61
CALD1-219ENST00000480638 KCNH2Q12809 1159 aa11.22□□□□□ -0.61
CALD1-219ENST00000480638 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
CALD1-219ENST00000480638 MAP10Q9P2G4 905 aa11.22□□□□□ -0.61
CALD1-219ENST00000480638 CTHP32929 405 aa11.21□□□□□ -0.61
CALD1-219ENST00000480638 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
CALD1-219ENST00000480638 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
CALD1-219ENST00000480638 PRKD2Q9BZL6 878 aa11.2□□□□□ -0.62
CALD1-219ENST00000480638 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
CALD1-219ENST00000480638 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
CALD1-219ENST00000480638 RGS20O76081 388 aa11.19□□□□□ -0.62
CALD1-219ENST00000480638 RPIAP49247 311 aa11.19□□□□□ -0.62
CALD1-219ENST00000480638 ZBTB24O43167 697 aaPredicted RBP11.18□□□□□ -0.62
CALD1-219ENST00000480638 SLC19A1P41440 591 aa11.18□□□□□ -0.62
CALD1-219ENST00000480638 SNRKQ9NRH2 765 aa11.17□□□□□ -0.62
CALD1-219ENST00000480638 V9GY48 417 aaPredicted RBP11.17□□□□□ -0.62
CALD1-219ENST00000480638 TRIM32Q13049 653 aa11.16□□□□□ -0.62
CALD1-219ENST00000480638 NR6A1Q15406 480 aa11.16□□□□□ -0.62
CALD1-219ENST00000480638 MTMR14Q8NCE2 650 aa11.16□□□□□ -0.62
CALD1-219ENST00000480638 SOCS7O14512 581 aa11.15□□□□□ -0.62
CALD1-219ENST00000480638 MCM6Q14566 821 aa11.14□□□□□ -0.63
CALD1-219ENST00000480638 SPRYD7Q5W111 196 aa11.14□□□□□ -0.63
CALD1-219ENST00000480638 EPS8L1Q8TE68 723 aa11.14□□□□□ -0.63
CALD1-219ENST00000480638 GJD4Q96KN9 370 aaPredicted RBP11.14□□□□□ -0.63
CALD1-219ENST00000480638 TRIM34Q9BYJ4 488 aa11.14□□□□□ -0.63
CALD1-219ENST00000480638 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
CALD1-219ENST00000480638 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
CALD1-219ENST00000480638 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
CALD1-219ENST00000480638 ZNF598Q86UK7 904 aaKnown RBP11.1□□□□□ -0.63
CALD1-219ENST00000480638 ARMC2Q8NEN0 867 aa11.1□□□□□ -0.63
CALD1-219ENST00000480638 BAP1Q92560 729 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms