RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
C9orf78-205ENST00000480023 SLC24A1O60721 1099 aa17.18■□□□□ 0.34
C9orf78-205ENST00000480023 RLBP1P12271 317 aa17.17■□□□□ 0.34
C9orf78-205ENST00000480023 DDIT3P35638 169 aa17.17■□□□□ 0.34
C9orf78-205ENST00000480023 CHMP7Q8WUX9 453 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-205ENST00000480023 C22orf23Q9BZE7 217 aa17.17■□□□□ 0.34
C9orf78-205ENST00000480023 ZMYND15Q9H091 742 aa17.17■□□□□ 0.34
C9orf78-205ENST00000480023 ARXQ96QS3 562 aa17.16■□□□□ 0.34
C9orf78-205ENST00000480023 VSIG10Q8N0Z9 540 aa17.15■□□□□ 0.34
C9orf78-205ENST00000480023 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
C9orf78-205ENST00000480023 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
C9orf78-205ENST00000480023 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
C9orf78-205ENST00000480023 NEURL4Q96JN8 1562 aa17.15■□□□□ 0.34
C9orf78-205ENST00000480023 ERBB4Q15303 1308 aa17.14■□□□□ 0.33
C9orf78-205ENST00000480023 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
C9orf78-205ENST00000480023 PTPRTO14522 1441 aa17.14■□□□□ 0.33
C9orf78-205ENST00000480023 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
C9orf78-205ENST00000480023 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
C9orf78-205ENST00000480023 TPM2P07951 284 aa17.12■□□□□ 0.33
C9orf78-205ENST00000480023 RUNDC1Q96C34 613 aa17.12■□□□□ 0.33
C9orf78-205ENST00000480023 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
C9orf78-205ENST00000480023 CLTCL1P53675 1640 aa17.11■□□□□ 0.33
C9orf78-205ENST00000480023 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
C9orf78-205ENST00000480023 HSCBQ8IWL3 235 aa17.11■□□□□ 0.33
C9orf78-205ENST00000480023 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
C9orf78-205ENST00000480023 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
C9orf78-205ENST00000480023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.33
C9orf78-205ENST00000480023 SNX21Q969T3 373 aa17.11■□□□□ 0.33
C9orf78-205ENST00000480023 TNNQ9UQP3 1299 aa17.11■□□□□ 0.33
C9orf78-205ENST00000480023 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
C9orf78-205ENST00000480023 SBNO2Q9Y2G9 1366 aa17.09■□□□□ 0.33
C9orf78-205ENST00000480023 PTMSP20962 102 aa17.09■□□□□ 0.33
C9orf78-205ENST00000480023 RBM25P49756 843 aaKnown RBP17.09■□□□□ 0.33
C9orf78-205ENST00000480023 HDAC1Q13547 482 aaPredicted RBP17.09■□□□□ 0.33
C9orf78-205ENST00000480023 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
C9orf78-205ENST00000480023 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.33
C9orf78-205ENST00000480023 SKOR2Q2VWA4 1001 aaPredicted RBP17.08■□□□□ 0.32
C9orf78-205ENST00000480023 TRIM44Q96DX7 344 aaPredicted RBP17.08■□□□□ 0.32
C9orf78-205ENST00000480023 TCP11L2Q8N4U5 519 aa17.07■□□□□ 0.32
C9orf78-205ENST00000480023 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
C9orf78-205ENST00000480023 MYOM2P54296 1465 aa17.06■□□□□ 0.32
C9orf78-205ENST00000480023 ADGRL1O94910 1474 aa17.06■□□□□ 0.32
C9orf78-205ENST00000480023 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
C9orf78-205ENST00000480023 ZKSCAN2Q63HK3 967 aa17.05■□□□□ 0.32
C9orf78-205ENST00000480023 GAS2L3Q86XJ1 694 aa17.05■□□□□ 0.32
C9orf78-205ENST00000480023 GBP4Q96PP9 640 aa17.05■□□□□ 0.32
C9orf78-205ENST00000480023 MAP3K4Q9Y6R4 1608 aa17.05■□□□□ 0.32
C9orf78-205ENST00000480023 ABCA6Q8N139 1617 aa17.05■□□□□ 0.32
C9orf78-205ENST00000480023 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
C9orf78-205ENST00000480023 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
C9orf78-205ENST00000480023 ADGRB2O60241 1585 aa17.04■□□□□ 0.32
C9orf78-205ENST00000480023 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
C9orf78-205ENST00000480023 DZIP1LQ8IYY4 767 aaKnown RBP17.04■□□□□ 0.32
C9orf78-205ENST00000480023 PDCL3Q9H2J4 239 aa17.04■□□□□ 0.32
C9orf78-205ENST00000480023 ZNF518AQ6AHZ1 1483 aa17.04■□□□□ 0.32
C9orf78-205ENST00000480023 TET3O43151 1660 aa17.04■□□□□ 0.32
C9orf78-205ENST00000480023 PPP1R9BQ96SB3 815 aa17.03■□□□□ 0.32
C9orf78-205ENST00000480023 BCL2L13Q9BXK5 485 aa17.03■□□□□ 0.32
C9orf78-205ENST00000480023 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
C9orf78-205ENST00000480023 CCDC173Q0VFZ6 552 aa17.02■□□□□ 0.32
C9orf78-205ENST00000480023 RRP7AQ9Y3A4 280 aaKnown RBP17.02■□□□□ 0.31
C9orf78-205ENST00000480023 TERF1P54274 439 aa17.01■□□□□ 0.31
C9orf78-205ENST00000480023 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
C9orf78-205ENST00000480023 NEUROD2Q15784 382 aa17■□□□□ 0.31
C9orf78-205ENST00000480023 ARHGAP31Q2M1Z3 1444 aa17■□□□□ 0.31
C9orf78-205ENST00000480023 FBLN2P98095 1184 aa17■□□□□ 0.31
C9orf78-205ENST00000480023 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
C9orf78-205ENST00000480023 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
C9orf78-205ENST00000480023 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
C9orf78-205ENST00000480023 ABCC1P33527 1531 aa17■□□□□ 0.31
C9orf78-205ENST00000480023 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
C9orf78-205ENST00000480023 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
C9orf78-205ENST00000480023 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
C9orf78-205ENST00000480023 ZSCAN30Q86W11 494 aa16.98■□□□□ 0.31
C9orf78-205ENST00000480023 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
C9orf78-205ENST00000480023 INO80Q9ULG1 1556 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-205ENST00000480023 OFD1O75665 1012 aa16.97■□□□□ 0.31
C9orf78-205ENST00000480023 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
C9orf78-205ENST00000480023 TRIM27P14373 513 aa16.96■□□□□ 0.31
C9orf78-205ENST00000480023 KIAA1211Q6ZU35 1233 aa16.96■□□□□ 0.31
C9orf78-205ENST00000480023 CFAP74Q9C0B2 1584 aa16.96■□□□□ 0.31
C9orf78-205ENST00000480023 PLCH2O75038 1416 aa16.96■□□□□ 0.31
C9orf78-205ENST00000480023 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.3
C9orf78-205ENST00000480023 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.3
C9orf78-205ENST00000480023 NUCB1Q02818 461 aa16.95■□□□□ 0.3
C9orf78-205ENST00000480023 CFAP70Q5T0N1 1121 aa16.95■□□□□ 0.3
C9orf78-205ENST00000480023 KIF2CQ99661 725 aa16.95■□□□□ 0.3
C9orf78-205ENST00000480023 NASPP49321 788 aaPredicted RBP16.94■□□□□ 0.3
C9orf78-205ENST00000480023 BMP2KLQ5H9B9 411 aa16.94■□□□□ 0.3
C9orf78-205ENST00000480023 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
C9orf78-205ENST00000480023 CFAP53Q96M91 514 aa16.94■□□□□ 0.3
C9orf78-205ENST00000480023 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
C9orf78-205ENST00000480023 NOS1P29475 1434 aa16.94■□□□□ 0.3
C9orf78-205ENST00000480023 KIF16BQ96L93 1317 aa16.93■□□□□ 0.3
C9orf78-205ENST00000480023 KLHL40Q2TBA0 621 aa16.93■□□□□ 0.3
C9orf78-205ENST00000480023 HS1BP3Q53T59 392 aa16.93■□□□□ 0.3
C9orf78-205ENST00000480023 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.93■□□□□ 0.3
C9orf78-205ENST00000480023 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
C9orf78-205ENST00000480023 SMC4Q9NTJ3 1288 aa16.93■□□□□ 0.3
C9orf78-205ENST00000480023 ABCC11Q96J66 1382 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms